Plant Ontology (PO) ======================================================================================================================== Overview -------- The Plant Ontology (PO) is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to plant genomics data. :Domain: Agricultural :Category: Plant Anatomy, Morphology, Growth and Development :Current Version: None :Last Updated: None :Creator: None :License: Creative Commons 4.0 :Format: OWL :Download: `Plant Ontology (PO) Homepage `_ Graph Metrics ------------- - **Total Nodes**: 20790 - **Total Edges**: 60638 - **Root Nodes**: 5936 - **Leaf Nodes**: 11639 Knowledge coverage ------------------ - Classes: 1874 - Individuals: 0 - Properties: 13 Hierarchical metrics -------------------- - **Maximum Depth**: 5 - **Minimum Depth**: 0 - **Average Depth**: 1.07 - **Depth Variance**: 0.72 Breadth metrics ------------------ - **Maximum Breadth**: 8034 - **Minimum Breadth**: 82 - **Average Breadth**: 3462.50 - **Breadth Variance**: 11752362.58 Dataset Statistics ------------------ Generated Benchmarks: - **Term Types**: 0 - **Taxonomic Relations**: 2866 - **Non-taxonomic Relations**: 36 - **Average Terms per Type**: 0.00 Usage Example ------------- .. code-block:: python from ontolearner.ontology import PO # Initialize and load ontology ontology = PO() ontology.load("path/to/ontology.OWL") # Extract datasets data = ontology.extract() # Access specific relations term_types = data.term_typings taxonomic_relations = data.type_taxonomies non_taxonomic_relations = data.type_non_taxonomic_relations