Molecular Process Ontology (MOP) ======================================================================================================================== Overview -------- MOP is the molecular process ontology. It contains the molecular processes that underlie the name reaction ontology RXNO, for example cyclization, methylation and demethylation. :Domain: Chemistry :Category: Chemistry, Molecular Biology :Current Version: 2022-05-11 :Last Updated: 2022-05-11 :Creator: None :License: Creative Commons 4.0 :Format: OWL :Download: `Molecular Process Ontology (MOP) Homepage `_ Graph Metrics ------------- - **Total Nodes**: 15794 - **Total Edges**: 41157 - **Root Nodes**: 3693 - **Leaf Nodes**: 8182 Knowledge coverage ------------------ - Classes: 3717 - Individuals: 0 - Properties: 11 Hierarchical metrics -------------------- - **Maximum Depth**: 6 - **Minimum Depth**: 0 - **Average Depth**: 1.09 - **Depth Variance**: 0.63 Breadth metrics ------------------ - **Maximum Breadth**: 7300 - **Minimum Breadth**: 3 - **Average Breadth**: 2253.14 - **Breadth Variance**: 7474153.55 Dataset Statistics ------------------ Generated Benchmarks: - **Term Types**: 0 - **Taxonomic Relations**: 4171 - **Non-taxonomic Relations**: 47 - **Average Terms per Type**: 0.00 Usage Example ------------- .. code-block:: python from ontolearner.ontology import MOP # Initialize and load ontology ontology = MOP() ontology.load("path/to/ontology.owl") # Extract datasets data = ontology.extract() # Access specific relations term_types = data.term_typings taxonomic_relations = data.type_taxonomies non_taxonomic_relations = data.type_non_taxonomic_relations