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  1. .gitattributes +1 -0
  2. README.md +27 -0
  3. dataset.csv +3 -0
  4. metadata.json +4 -0
.gitattributes CHANGED
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  # Video files - compressed
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  # Video files - compressed
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  *.mp4 filter=lfs diff=lfs merge=lfs -text
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  *.webm filter=lfs diff=lfs merge=lfs -text
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README.md ADDED
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+ ---
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+ license: mit
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+ configs:
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+ - config_name: dataset
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+ data_files: "dataset.csv"
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+ ---
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+
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+ ### Description
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+ This dataset contains fitness score of mutant GB1 protein.
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+
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+ **Protein Format:** AA sequence
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+
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+ ### Splits
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+ traing: 119644
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+
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+ valid: 14917
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+
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+ test: 14800
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+
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+ ### Related paper
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+ Nicholas C Wu, Lei Dai, C Anders Olson, James O Lloyd-Smith, Ren Sun (2016) Adaptation in protein fitness landscapes is facilitated by indirect paths eLife 5:e16965
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+ https://doi.org/10.7554/eLife.16965
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+
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+
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+ ### Label
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+ Label is the fitness of mutant protein. The fitness of each variant can be viewed as the fitness relative to wildtype, such that = 1.
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+ Therefore all labels are larger than 0, if label >1 means high fitness compare to wildtype.
dataset.csv ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:2f115d4eaf03b6083dcc22f7451b3ddfad41c9d8e519286c4e69b6d06db78f1c
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+ size 10934877
metadata.json ADDED
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+ {
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+ "training_task_type": "Protein-level Regression",
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+ "training_data_type": "AA"
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+ }