# Standard imports: import os from typing import List, Optional # External imports: from cannlytics.data.cache import Bogart from cannlytics.data.coas import CoADoc def get_pdf_files( pdf_dir, min_file_size: Optional[int] = 21_000, ) -> list: """Get all of the PDFs in the nested directory.""" pdfs = [] for root, _, files in os.walk(pdf_dir): for file in files: if file.endswith('.pdf'): file_path = os.path.join(root, file) file_size = os.path.getsize(file_path) if file_size >= min_file_size: pdfs.append(file_path) return pdfs def parse_coa_pdfs( pdfs: List[str], parser: Optional[CoADoc] = None, cache: Optional[Bogart] = None, reverse: Optional[bool] = False, verbose: Optional[bool] = True, key: Optional[str] = 'coa_pdf', ) -> list: """Parse corresponding COAs from a DataFrame in a PDF directory.""" all_results = [] if parser is None: parser = CoADoc() if verbose: print(f'Parsing {len(pdfs)} PDFs...') if reverse: pdfs = pdfs[::-1] for pdf in pdfs: if not os.path.exists(pdf): if verbose: print(f'PDF not found: {pdf}') continue pdf_hash = cache.hash_file(pdf) if cache is not None: if cache.get(pdf_hash): if verbose: print('Cached:', pdf) all_results.append(cache.get(pdf_hash)) continue try: coa_data = parser.parse_pdf(pdf, verbose=verbose) if isinstance(coa_data, list): coa_data = coa_data[0] coa_data[key] = os.path.basename(pdf) all_results.append(coa_data) if cache is not None: cache.set(pdf_hash, coa_data) if verbose: print(f'Parsed PDF: {pdf}') except Exception as e: parser.quit() if verbose: print(f'Failed to parse PDF: {pdf}') print(e) return all_results