Datasets:
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README.md
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@@ -227,7 +227,8 @@ Select the suitable preprocessing methods from the "preprocess.py" module.
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### data-curation.py
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This file curates, i.e., merges datasets, selects most reliable values among multiple occurences,
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inputs:
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The original AqSoDB dataset does not define splits, so here we have used the `Realistic Split` method described
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in [(Martin et al., 2018)](https://doi.org/10.1021/acs.jcim.7b00166).
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###
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```
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### data-curation.py
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This file curates, i.e., merges datasets, selects most reliable values among multiple occurences,
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and adds 2D descriptors from 9 different standardized datasets that are obtained after the pre-processing step.
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inputs:
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The original AqSoDB dataset does not define splits, so here we have used the `Realistic Split` method described
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in [(Martin et al., 2018)](https://doi.org/10.1021/acs.jcim.7b00166).
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### Citation
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TY - JOUR
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AU - Sorkun, Murat Cihan
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AU - Khetan, Abhishek
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AU - Er, Süleyman
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PY - 2019
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DA - 2019/08/08
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TI - AqSolDB, a curated reference set of aqueous solubility and 2D descriptors for a diverse set of compounds
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JO - Scientific Data
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SP - 143
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VL - 6
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IS - 1
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AB - Water is a ubiquitous solvent in chemistry and life.
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It is therefore no surprise that the aqueous solubility of compounds has a key role in various domains,
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including but not limited to drug discovery, paint, coating, and battery materials design.
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Measurement and prediction of aqueous solubility is a complex and prevailing challenge in chemistry.
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For the latter, different data-driven prediction models have recently been developed to augment the physics-based modeling approaches.
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To construct accurate data-driven estimation models, it is essential that the underlying experimental calibration data used by these models is of high fidelity and quality.
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Existing solubility datasets show variance in the chemical space of compounds covered, measurement methods, experimental conditions,
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but also in the non-standard representations, size, and accessibility of data.
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To address this problem, we generated a new database of compounds, AqSolDB, by merging a total of nine different aqueous solubility datasets,
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curating the merged data, standardizing and validating the compound representation formats, marking with reliability labels, and providing 2D descriptors of compounds as a Supplementary Resource.
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SN - 2052-4463
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UR - https://doi.org/10.1038/s41597-019-0151-1
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DO - 10.1038/s41597-019-0151-1
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ID - Sorkun2019
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ER -
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```
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