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README.md
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The utils subfolder contains all the metabolic models that we used for the friend or foe construction. All metabolic models are stored in .mat format, the number also identifies the species. In addition, we provide the environment results of the metabolic models in raw .csv files that collect the environments for specific interactions. A General info subfolder contains information about organism names and abbreviations of environmental compounds (to convert the abbreviation to a name, see Agora_env_compounds.xlsx for AGORA and the Bigg database at http://bigg.ucsd.edu for CARVEME).
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# Getting started
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from huggingface_hub import hf_hub_download
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import pandas as pd
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The utils subfolder contains all the metabolic models that we used for the friend or foe construction. All metabolic models are stored in .mat format, the number also identifies the species. In addition, we provide the environment results of the metabolic models in raw .csv files that collect the environments for specific interactions. A General info subfolder contains information about organism names and abbreviations of environmental compounds (to convert the abbreviation to a name, see Agora_env_compounds.xlsx for AGORA and the Bigg database at http://bigg.ucsd.edu for CARVEME).
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# Getting started
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```python
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from huggingface_hub import hf_hub_download
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import pandas as pd
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