lhoestq HF Staff commited on
Commit
d9711cd
·
1 Parent(s): c9c4e09

unique keys

Browse files
Files changed (1) hide show
  1. pubchem_selfies.py +3 -1
pubchem_selfies.py CHANGED
@@ -16,6 +16,7 @@
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  import json
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  import glob
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  import gzip
 
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  import datasets
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@@ -473,9 +474,10 @@ class PubchemSelfies(datasets.GeneratorBasedBuilder):
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  # The `key` is for legacy reasons (tfds) and is not important in itself, but must be unique for each example.
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  for filepath in subdirs:
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  with gzip.open(open(filepath, "rb"), "rt", encoding="utf-8") as f:
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- for key, row in enumerate(f):
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  data = json.loads(row)
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  properties = data["molecules"][0]["properties"]
 
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  yield key, {
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  "PUBCHEM_COMPOUND_CID": properties["PUBCHEM_COMPOUND_CID"],
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  "PUBCHEM_OPENEYE_CAN_SMILES": properties[
 
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  import json
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  import glob
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  import gzip
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+ import os
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  import datasets
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  # The `key` is for legacy reasons (tfds) and is not important in itself, but must be unique for each example.
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  for filepath in subdirs:
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  with gzip.open(open(filepath, "rb"), "rt", encoding="utf-8") as f:
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+ for row_idx, row in enumerate(f):
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  data = json.loads(row)
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  properties = data["molecules"][0]["properties"]
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+ key = f"{os.path.basename(filepath)}_{row_idx}"
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  yield key, {
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  "PUBCHEM_COMPOUND_CID": properties["PUBCHEM_COMPOUND_CID"],
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  "PUBCHEM_OPENEYE_CAN_SMILES": properties[