okunator commited on
Commit
6da9def
·
verified ·
1 Parent(s): 1aef02b

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +2 -2
README.md CHANGED
@@ -27,7 +27,7 @@ pip install albumentations
27
  ```python
28
  from histolytics.models.stardist_panoptic import StarDistPanoptic
29
 
30
- model = StarDistPanoptic.from_pretrained("hgsc_v1_efficientnet_b5")
31
  ```
32
 
33
  ## 3. Run inference for one image
@@ -93,7 +93,7 @@ ax[1].imshow(label2rgb(out["nuc"][0][0], bg_label=0)) # inst_map
93
  ax[2].imshow(label2rgb(out["nuc"][0][1], bg_label=0)) # type_map
94
  ax[3].imshow(label2rgb(out["tissue"][0], bg_label=0)) # tissue_map
95
  ```
96
- <!-- ![out](sdist_out.png) -->
97
 
98
  ## Dataset Details
99
  Semi-manually annotated CIN2 samples from a (private) cohort of Helsinki University Hospital
 
27
  ```python
28
  from histolytics.models.stardist_panoptic import StarDistPanoptic
29
 
30
+ model = StarDistPanoptic.from_pretrained("cin2_v1_efficientnet_b5")
31
  ```
32
 
33
  ## 3. Run inference for one image
 
93
  ax[2].imshow(label2rgb(out["nuc"][0][1], bg_label=0)) # type_map
94
  ax[3].imshow(label2rgb(out["tissue"][0], bg_label=0)) # tissue_map
95
  ```
96
+ ![out](sdist_out_pan_cin2.png)
97
 
98
  ## Dataset Details
99
  Semi-manually annotated CIN2 samples from a (private) cohort of Helsinki University Hospital