canergen commited on
Commit
2308a4a
·
verified ·
1 Parent(s): fcca93a

Upload folder using huggingface_hub

Browse files
Files changed (3) hide show
  1. adata.h5ad +1 -1
  2. metrics.json +3 -3
  3. model.pt +1 -1
adata.h5ad CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:525fec6f8b3ff3719cafbbc57fb381f76e7063ea24e7d80936f4f55ab6c2a326
3
  size 21972088
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b8d2d374b228fd6a9afea05af9cdb58be6c83295ca806f9a7eb4883c890b9a80
3
  size 21972088
metrics.json CHANGED
@@ -1,5 +1,5 @@
1
  {
2
- "cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.65 | 1.58 |\n| Pearson Correlation | 0.89 | 0.88 |\n| Spearman Correlation | 0.80 | 0.78 |\n| R\u00b2 (R-Squared) | 0.54 | 0.62 |",
3
- "gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 4.52 |\n| Pearson Correlation | 0.86 |\n| Spearman Correlation | 0.98 |\n| R\u00b2 (R-Squared) | 0.27 |",
4
- "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| CD4-positive helper T cell | 0.95 | 3.13 | 0.71 | 0.83 | 0.16 | 0.88 | 3356.00 |\n| fibroblast | 0.94 | 1.23 | 0.81 | 0.96 | 0.45 | 0.92 | 3251.00 |\n| innate lymphoid cell | 0.91 | 2.19 | 0.66 | 0.82 | 0.20 | 0.82 | 2594.00 |\n| B cell | 0.93 | 2.71 | 0.63 | 0.75 | 0.20 | 0.84 | 1919.00 |\n| DN3 thymocyte | 0.91 | 3.33 | 0.67 | 0.79 | 0.19 | 0.83 | 1788.00 |\n| plasma cell | 0.88 | 1.73 | 0.74 | 0.89 | 0.26 | 0.94 | 1465.00 |\n| vein endothelial cell | 0.93 | 1.96 | 0.76 | 0.89 | 0.36 | 0.87 | 1442.00 |\n| vascular associated smooth muscle cell | 0.94 | 2.08 | 0.74 | 0.90 | 0.36 | 0.89 | 1439.00 |\n| DN1 thymic pro-T cell | 0.91 | 3.81 | 0.64 | 0.75 | 0.23 | 0.83 | 985.00 |\n| naive regulatory T cell | 0.88 | 3.85 | 0.70 | 0.78 | 0.20 | 0.84 | 761.00 |\n| CD8-positive, alpha-beta cytotoxic T cell | 0.90 | 3.82 | 0.71 | 0.76 | 0.20 | 0.84 | 501.00 |\n| T follicular helper cell | 0.83 | 3.98 | 0.69 | 0.73 | 0.20 | 0.81 | 398.00 |\n| capillary endothelial cell | 0.91 | 3.35 | 0.68 | 0.76 | 0.37 | 0.82 | 383.00 |\n| endothelial cell of artery | 0.90 | 3.07 | 0.72 | 0.80 | 0.37 | 0.83 | 355.00 |\n| macrophage | 0.89 | 2.92 | 0.71 | 0.81 | 0.36 | 0.84 | 303.00 |\n| endothelial cell of lymphatic vessel | 0.90 | 3.11 | 0.73 | 0.83 | 0.39 | 0.84 | 256.00 |\n| medullary thymic epithelial cell | 0.77 | 2.65 | 0.78 | 0.90 | 0.45 | 0.89 | 140.00 |\n| monocyte | 0.87 | 4.40 | 0.65 | 0.65 | 0.37 | 0.81 | 88.00 |\n| mature NK T cell | 0.80 | 5.00 | 0.59 | 0.56 | 0.32 | 0.68 | 80.00 |\n| erythrocyte | 0.80 | 4.55 | 0.56 | 0.51 | 0.32 | 0.88 | 39.00 |\n| DN4 thymocyte | 0.77 | 5.29 | 0.60 | 0.62 | 0.40 | 0.77 | 32.00 |"
5
  }
 
1
  {
2
+ "cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 1.66 | 1.63 |\n| Pearson Correlation | 0.88 | 0.87 |\n| Spearman Correlation | 0.81 | 0.79 |\n| R\u00b2 (R-Squared) | 0.53 | 0.53 |",
3
+ "gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 4.48 |\n| Pearson Correlation | 0.86 |\n| Spearman Correlation | 0.98 |\n| R\u00b2 (R-Squared) | 0.33 |",
4
+ "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| CD4-positive helper T cell | 0.93 | 3.05 | 0.72 | 0.84 | 0.16 | 0.88 | 3356.00 |\n| fibroblast | 0.95 | 1.23 | 0.81 | 0.96 | 0.45 | 0.92 | 3251.00 |\n| innate lymphoid cell | 0.92 | 2.18 | 0.66 | 0.82 | 0.21 | 0.83 | 2594.00 |\n| B cell | 0.92 | 2.59 | 0.65 | 0.74 | 0.21 | 0.84 | 1919.00 |\n| DN3 thymocyte | 0.90 | 3.19 | 0.69 | 0.80 | 0.18 | 0.82 | 1788.00 |\n| plasma cell | 0.89 | 1.89 | 0.70 | 0.89 | 0.26 | 0.94 | 1465.00 |\n| vein endothelial cell | 0.94 | 1.98 | 0.76 | 0.90 | 0.35 | 0.87 | 1442.00 |\n| vascular associated smooth muscle cell | 0.94 | 1.94 | 0.75 | 0.90 | 0.37 | 0.89 | 1439.00 |\n| DN1 thymic pro-T cell | 0.90 | 3.50 | 0.68 | 0.77 | 0.22 | 0.83 | 985.00 |\n| naive regulatory T cell | 0.84 | 3.90 | 0.70 | 0.76 | 0.20 | 0.84 | 761.00 |\n| CD8-positive, alpha-beta cytotoxic T cell | 0.91 | 3.87 | 0.70 | 0.76 | 0.20 | 0.84 | 501.00 |\n| T follicular helper cell | 0.81 | 4.19 | 0.67 | 0.72 | 0.20 | 0.81 | 398.00 |\n| capillary endothelial cell | 0.93 | 3.09 | 0.71 | 0.78 | 0.35 | 0.82 | 383.00 |\n| endothelial cell of artery | 0.91 | 3.27 | 0.69 | 0.79 | 0.38 | 0.84 | 355.00 |\n| macrophage | 0.90 | 2.69 | 0.73 | 0.81 | 0.35 | 0.83 | 303.00 |\n| endothelial cell of lymphatic vessel | 0.89 | 3.15 | 0.73 | 0.82 | 0.40 | 0.84 | 256.00 |\n| medullary thymic epithelial cell | 0.78 | 2.37 | 0.81 | 0.91 | 0.45 | 0.89 | 140.00 |\n| monocyte | 0.84 | 3.99 | 0.68 | 0.68 | 0.36 | 0.81 | 88.00 |\n| mature NK T cell | 0.82 | 5.09 | 0.58 | 0.55 | 0.32 | 0.68 | 80.00 |\n| erythrocyte | 0.76 | 4.72 | 0.54 | 0.49 | 0.34 | 0.89 | 39.00 |\n| DN4 thymocyte | 0.74 | 5.37 | 0.59 | 0.62 | 0.38 | 0.77 | 32.00 |"
5
  }
model.pt CHANGED
@@ -1,3 +1,3 @@
1
  version https://git-lfs.github.com/spec/v1
2
- oid sha256:e4c613b2840713d02c20097656be7283105c63a5634f64c6a08462b4a200df3a
3
  size 8352893
 
1
  version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ccb27c825fd9be27d12e448940e17d205deed3e79fe33504746e142e3a5cd3b8
3
  size 8352893