File size: 10,712 Bytes
e284167
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
{
  "task": {
    "id": "vibrio_operonic_pair",
    "display_name": "Vibrio Operonic Pair",
    "description": "Evaluate on Vibrio operonic pair classification task.",
    "modality": "protein",
    "type": "pair_classification",
    "datasets": [
      {
        "path": "tattabio/vibrio_operonic_pair",
        "revision": "24781b12b45bf81a079a6164ef0d2124948c1878"
      }
    ],
    "primary_metric_id": "top_ap"
  },
  "model": {
    "hf_name": "esm3_sm_open_v1",
    "revision": "...",
    "num_layers": 48,
    "num_params": 1401735748,
    "embed_dim": 1536
  },
  "dgeb_version": "0.0.0",
  "results": [
    {
      "layer_number": 24,
      "layer_display_name": "24",
      "metrics": [
        {
          "id": "cos_sim_accuracy",
          "display_name": "cos_sim_accuracy",
          "description": null,
          "value": 0.6715895841430237
        },
        {
          "id": "cos_sim_accuracy_threshold",
          "display_name": "cos_sim_accuracy_threshold",
          "description": null,
          "value": 0.9996908903121948
        },
        {
          "id": "cos_sim_f1",
          "display_name": "cos_sim_f1",
          "description": null,
          "value": 0.5164867230814123
        },
        {
          "id": "cos_sim_f1_threshold",
          "display_name": "cos_sim_f1_threshold",
          "description": null,
          "value": 0.997383713722229
        },
        {
          "id": "cos_sim_precision",
          "display_name": "cos_sim_precision",
          "description": null,
          "value": 0.34897476340694006
        },
        {
          "id": "cos_sim_recall",
          "display_name": "cos_sim_recall",
          "description": null,
          "value": 0.9932659932659933
        },
        {
          "id": "cos_sim_ap",
          "display_name": "cos_sim_ap",
          "description": null,
          "value": 0.4521561741786758
        },
        {
          "id": "manhattan_accuracy",
          "display_name": "manhattan_accuracy",
          "description": null,
          "value": 0.6708122813835989
        },
        {
          "id": "manhattan_accuracy_threshold",
          "display_name": "manhattan_accuracy_threshold",
          "description": null,
          "value": 398.7920837402344
        },
        {
          "id": "manhattan_f1",
          "display_name": "manhattan_f1",
          "description": null,
          "value": 0.5162224797219003
        },
        {
          "id": "manhattan_f1_threshold",
          "display_name": "manhattan_f1_threshold",
          "description": null,
          "value": 1435.895263671875
        },
        {
          "id": "manhattan_precision",
          "display_name": "manhattan_precision",
          "description": null,
          "value": 0.3479109722764545
        },
        {
          "id": "manhattan_recall",
          "display_name": "manhattan_recall",
          "description": null,
          "value": 1.0
        },
        {
          "id": "manhattan_ap",
          "display_name": "manhattan_ap",
          "description": null,
          "value": 0.4485744553427403
        },
        {
          "id": "euclidean_accuracy",
          "display_name": "euclidean_accuracy",
          "description": null,
          "value": 0.6657598134473377
        },
        {
          "id": "euclidean_accuracy_threshold",
          "display_name": "euclidean_accuracy_threshold",
          "description": null,
          "value": 13.880131721496582
        },
        {
          "id": "euclidean_f1",
          "display_name": "euclidean_f1",
          "description": null,
          "value": 0.5161478033168461
        },
        {
          "id": "euclidean_f1_threshold",
          "display_name": "euclidean_f1_threshold",
          "description": null,
          "value": 55.61311340332031
        },
        {
          "id": "euclidean_precision",
          "display_name": "euclidean_precision",
          "description": null,
          "value": 0.3483896307934014
        },
        {
          "id": "euclidean_recall",
          "display_name": "euclidean_recall",
          "description": null,
          "value": 0.9955106621773289
        },
        {
          "id": "euclidean_ap",
          "display_name": "euclidean_ap",
          "description": null,
          "value": 0.43312932328281045
        },
        {
          "id": "dot_accuracy",
          "display_name": "dot_accuracy",
          "description": null,
          "value": 0.6568208317139526
        },
        {
          "id": "dot_accuracy_threshold",
          "display_name": "dot_accuracy_threshold",
          "description": null,
          "value": 314096.6875
        },
        {
          "id": "dot_f1",
          "display_name": "dot_f1",
          "description": null,
          "value": 0.5152660657167781
        },
        {
          "id": "dot_f1_threshold",
          "display_name": "dot_f1_threshold",
          "description": null,
          "value": 270321.46875
        },
        {
          "id": "dot_precision",
          "display_name": "dot_precision",
          "description": null,
          "value": 0.347723704866562
        },
        {
          "id": "dot_recall",
          "display_name": "dot_recall",
          "description": null,
          "value": 0.9943883277216611
        },
        {
          "id": "dot_ap",
          "display_name": "dot_ap",
          "description": null,
          "value": 0.38171085731998233
        },
        {
          "id": "top_ap",
          "display_name": "top_ap",
          "description": null,
          "value": 0.4521561741786758
        }
      ]
    },
    {
      "layer_number": 47,
      "layer_display_name": "47",
      "metrics": [
        {
          "id": "cos_sim_accuracy",
          "display_name": "cos_sim_accuracy",
          "description": null,
          "value": 0.6692576758647493
        },
        {
          "id": "cos_sim_accuracy_threshold",
          "display_name": "cos_sim_accuracy_threshold",
          "description": null,
          "value": 0.9806265234947205
        },
        {
          "id": "cos_sim_f1",
          "display_name": "cos_sim_f1",
          "description": null,
          "value": 0.5221445221445222
        },
        {
          "id": "cos_sim_f1_threshold",
          "display_name": "cos_sim_f1_threshold",
          "description": null,
          "value": 0.9249705076217651
        },
        {
          "id": "cos_sim_precision",
          "display_name": "cos_sim_precision",
          "description": null,
          "value": 0.3712121212121212
        },
        {
          "id": "cos_sim_recall",
          "display_name": "cos_sim_recall",
          "description": null,
          "value": 0.8799102132435466
        },
        {
          "id": "cos_sim_ap",
          "display_name": "cos_sim_ap",
          "description": null,
          "value": 0.44374575153725326
        },
        {
          "id": "manhattan_accuracy",
          "display_name": "manhattan_accuracy",
          "description": null,
          "value": 0.6824718227749709
        },
        {
          "id": "manhattan_accuracy_threshold",
          "display_name": "manhattan_accuracy_threshold",
          "description": null,
          "value": 54751.6875
        },
        {
          "id": "manhattan_f1",
          "display_name": "manhattan_f1",
          "description": null,
          "value": 0.5474349964862966
        },
        {
          "id": "manhattan_f1_threshold",
          "display_name": "manhattan_f1_threshold",
          "description": null,
          "value": 77884.234375
        },
        {
          "id": "manhattan_precision",
          "display_name": "manhattan_precision",
          "description": null,
          "value": 0.39846547314578007
        },
        {
          "id": "manhattan_recall",
          "display_name": "manhattan_recall",
          "description": null,
          "value": 0.8742985409652076
        },
        {
          "id": "manhattan_ap",
          "display_name": "manhattan_ap",
          "description": null,
          "value": 0.49709099146687025
        },
        {
          "id": "euclidean_accuracy",
          "display_name": "euclidean_accuracy",
          "description": null,
          "value": 0.6789739603575593
        },
        {
          "id": "euclidean_accuracy_threshold",
          "display_name": "euclidean_accuracy_threshold",
          "description": null,
          "value": 1890.283447265625
        },
        {
          "id": "euclidean_f1",
          "display_name": "euclidean_f1",
          "description": null,
          "value": 0.5386138613861385
        },
        {
          "id": "euclidean_f1_threshold",
          "display_name": "euclidean_f1_threshold",
          "description": null,
          "value": 3902.364501953125
        },
        {
          "id": "euclidean_precision",
          "display_name": "euclidean_precision",
          "description": null,
          "value": 0.3814866760168303
        },
        {
          "id": "euclidean_recall",
          "display_name": "euclidean_recall",
          "description": null,
          "value": 0.9158249158249159
        },
        {
          "id": "euclidean_ap",
          "display_name": "euclidean_ap",
          "description": null,
          "value": 0.49224489125057536
        },
        {
          "id": "dot_accuracy",
          "display_name": "dot_accuracy",
          "description": null,
          "value": 0.6544889234356782
        },
        {
          "id": "dot_accuracy_threshold",
          "display_name": "dot_accuracy_threshold",
          "description": null,
          "value": 123162152.0
        },
        {
          "id": "dot_f1",
          "display_name": "dot_f1",
          "description": null,
          "value": 0.514302224790523
        },
        {
          "id": "dot_f1_threshold",
          "display_name": "dot_f1_threshold",
          "description": null,
          "value": 16955928.0
        },
        {
          "id": "dot_precision",
          "display_name": "dot_precision",
          "description": null,
          "value": 0.3463035019455253
        },
        {
          "id": "dot_recall",
          "display_name": "dot_recall",
          "description": null,
          "value": 0.9988776655443322
        },
        {
          "id": "dot_ap",
          "display_name": "dot_ap",
          "description": null,
          "value": 0.32925404339553804
        },
        {
          "id": "top_ap",
          "display_name": "top_ap",
          "description": null,
          "value": 0.49709099146687025
        }
      ]
    }
  ]
}