Science GPT-OSS Model (25 Experts)

Project: https://amanpriyanshu.github.io/GPT-OSS-MoE-ExpertFingerprinting/

👥 Follow the Authors

Aman Priyanshu LinkedIn Twitter Website

Supriti Vijay LinkedIn Twitter Website

Introduction

This is a pruned variant of OpenAI's GPT-OSS-20B model, reduced to 25 experts per layer based on activation patterns from the AmanPriyanshu/GPT-OSS-20B MoE Expert Activations dataset. We analyzed router decisions across evaluation benchmarks to identify and retain experts most relevant for science tasks.

⚠️ Experimental Model: This is an experimental pruned model that may not work well - check the examples below to see if the outputs meet your needs before use.

This pruning approach reduces the model size while attempting to preserve performance on the target domain.

Model Architecture & Statistics

Metric Value
Base Model openai/gpt-oss-20b
Architecture Mixture-of-Experts Transformer
Total Parameters ~16.7B (pruned from 21B)
Original Experts per Layer 32
Pruned Experts per Layer 25
Layers 24
Top-k Routing 4
Context Length 128K tokens
Attention Heads 64 (Query), 8 (Key-Value)
Residual Dimension 2880
Attention Pattern Alternating dense & sliding window (128 tokens)
Positional Encoding RoPE (Rotary Position Embedding)
Normalization RMSNorm
Precision BF16
License Apache 2.0
Specialization Science

Pruning Methodology

What is Expert Pruning?

Mixture-of-Experts models contain multiple specialized sub-networks (experts) per layer. During inference, only a subset of experts are activated for each token. Expert pruning involves:

  1. Analyzing Usage Patterns: Tracking which experts activate most frequently for specific tasks
  2. Removing Underutilized Experts: Discarding experts with low activation rates for the target domain
  3. Preserving Router Functionality: Maintaining the routing mechanism with fewer available experts

Our Approach

  • Data-Driven Selection: Used activation patterns from science evaluation tasks
  • Systematic Reduction: Reduced from 32 to 25 experts per layer
  • No Retraining: Direct removal without additional training steps

Performance & Applications

Pruning Benefits

  • Smaller Memory Footprint: 78.1% of original expert parameters
  • Reduced Computational Load: Fewer routing decisions during inference
  • Focused Capabilities: Retains experts relevant to science tasks

Use Cases

  • Speculative Decoding: Draft model for full GPT-OSS-20B
  • Resource-Constrained Deployment: Edge devices, mobile applications
  • Research: Study expert specialization in MoE models
  • Fine-tuning: Smaller base model for domain adaptation

Note: Performance may vary depending on how well the pruned experts match your specific use case.

Motivation & Expert Selection

This science-specialized model leverages experts that showed high activation patterns during scientific reasoning tasks from GPQA (physics, chemistry, biology) and MMLU science domains. These experts demonstrate superior performance on complex scientific problem-solving and technical knowledge recall.

The expert selection process utilized our comprehensive analysis of router activation patterns across multiple evaluation benchmarks:

  • GPQA: Graduate-level questions in physics, chemistry, biology (Diamond & Expert subsets)
  • MMLU/MMLU-Pro: Comprehensive knowledge across 57+ subjects including science, medicine, law
  • SORRY-Bench: Safety evaluation across harmful content categories
  • Tulu3: Persona-driven instruction following with verifiable constraints
  • Polyglot-or-Not: Multilingual factual completion tasks

By identifying experts that consistently activated for science tasks, we created this specialized model that maintains domain expertise while significantly reducing computational requirements from 32 to 25 experts per layer.

Dataset & Analysis Foundation

This model is based on analysis from the GPT-OSS-20B MoE Expert Activations dataset available at: 🔗 https://huggingface.co/datasets/AmanPriyanshu/GPT-OSS-20B-MoE-expert-activations

The dataset contains router activation patterns from OpenAI's GPT-OSS-20B model across diverse evaluation benchmarks, enabling the creation of these domain-optimized models through systematic expert pruning.

Pruning Methodology

Our approach involves:

  1. Activation Analysis: Comprehensive evaluation of expert usage patterns across domain-specific tasks
  2. Expert Ranking: Identification of the most frequently activated experts for target domains
  3. Systematic Pruning: Reduction from 32 to 25 experts while preserving router functionality
  4. Quality Validation: Testing to ensure maintained performance on target tasks

This is a direct pruning approach - no additional training was performed. The model inherits all capabilities from the original GPT-OSS-20B with focused expert selection.

Usage

CPU Inference

from transformers import AutoModelForCausalLM, AutoTokenizer
import torch

# Load the specialized model on CPU
model = AutoModelForCausalLM.from_pretrained(
    "AmanPriyanshu/gpt-oss-16.7b-specialized-science-pruned-moe-only-25-experts", 
    torch_dtype=torch.bfloat16, 
    device_map="cpu", 
    trust_remote_code=True
)
tokenizer = AutoTokenizer.from_pretrained("AmanPriyanshu/gpt-oss-16.7b-specialized-science-pruned-moe-only-25-experts")

# Generate with the model
messages = [
    {"role": "user", "content": "Explain the process of photosynthesis in plants."}
]

inputs = tokenizer.apply_chat_template(
    messages, 
    add_generation_prompt=True, 
    return_tensors="pt", 
    return_dict=True,
    reasoning_effort="medium"
)

# Ensure inputs are on the same device as model
inputs = {k: v.to(model.device) for k, v in inputs.items()}

outputs = model.generate(
    **inputs, 
    max_new_tokens=512,
    do_sample=True,
    temperature=0.1,
    top_p=0.9,
    pad_token_id=tokenizer.eos_token_id,
    eos_token_id=tokenizer.eos_token_id
)

# Decode only the generated part
input_length = inputs['input_ids'].shape[1]
response_tokens = outputs[0][input_length:]
response = tokenizer.decode(response_tokens, skip_special_tokens=True)
print(response)

Apple Silicon (MPS) Inference

from transformers import AutoModelForCausalLM, AutoTokenizer
import torch

# Check MPS availability and load model
device = "mps" if torch.backends.mps.is_available() else "cpu"

model = AutoModelForCausalLM.from_pretrained(
    "AmanPriyanshu/gpt-oss-16.7b-specialized-science-pruned-moe-only-25-experts", 
    torch_dtype=torch.float16,  # Better MPS compatibility
    device_map=device, 
    trust_remote_code=True,
    low_cpu_mem_usage=True
)
tokenizer = AutoTokenizer.from_pretrained("AmanPriyanshu/gpt-oss-16.7b-specialized-science-pruned-moe-only-25-experts")

# Generate with the model
messages = [
    {"role": "user", "content": "Explain the process of photosynthesis in plants."}
]

inputs = tokenizer.apply_chat_template(
    messages, 
    add_generation_prompt=True, 
    return_tensors="pt", 
    return_dict=True,
    reasoning_effort="medium"
)

# Move inputs to model device
inputs = {k: v.to(model.device) if isinstance(v, torch.Tensor) else v for k, v in inputs.items()}

# Use torch.no_grad for MPS stability
with torch.no_grad():
    outputs = model.generate(
        **inputs, 
        max_new_tokens=512,
        do_sample=True,
        temperature=0.1,
        top_p=0.9,
        pad_token_id=tokenizer.eos_token_id,
        eos_token_id=tokenizer.eos_token_id,
        use_cache=True
    )

# Decode only the generated part
input_length = inputs['input_ids'].shape[1]
response_tokens = outputs[0][input_length:]
response = tokenizer.decode(response_tokens, skip_special_tokens=True)
print(response)

GPU Inference

For CUDA GPU inference, the models work with minimal modifications from the CPU example above. Simply change:

device_map="auto"  # Will automatically use GPU if available
torch_dtype=torch.bfloat16  # or torch.float16

Model Examples

The following examples demonstrate the model's performance on science tasks:

Example 1

Question: Explain the process of photosynthesis in plants.

Response:

<|channel|>analysis<|message|>Need concise explanation.<|end|><|start|>assistant<|channel|>final<|message|>**Photosynthesis** is the process by which green plants, algae, and some bacteria convert light energy into chemical energy, producing sugars that fuel growth and releasing oxygen as a by‑product. It takes place mainly in the chloroplasts of plant cells, specifically within the thylakoid membranes.

---

## 1. Light‑Dependent Reactions (Photophosphorylation)

| Step | What Happens | Key Components |
|------|--------------|-----------------|
| **Photon absorption** | Light energy excites electrons in chlorophyll a and b. | Chlorophyll, accessory pigments |
| **Water splitting (photolysis)** | H₂O → ½ O₂ + 2 H⁺ + 2 e⁻ (electrons). | Photosystem II (PSII), oxygen‑evolving complex |
| **Electron transport chain (ETC)** | Excited electrons travel from PSII → plastoquinone → cytochrome b₆f → plastocyanin → Photosystem I (PSI). | PSII, PQ, Cyt b₆f, PC, PSI |
| **ATP synthesis** | Proton gradient (ΔpH) drives ATP synthase. | ATP synthase, thylakoid lumen |
| **NADPH formation** | Electrons reduce NADP⁺ to NADPH. | PSI, ferredoxin, NADP⁺ reductase |
| **O₂ release** | Oxygen produced from water splitting is released to the atmosphere. | PSII, oxygen-evolving complex |

**Outcome of light‑dependent reactions:**

- **2 ATP** (per NADPH produced)
- **2 NADPH**
- **½ O₂** (per 2 H₂O)

---

## 2. Light‑Independent Reactions (Calvin Cycle)

The Calvin cycle uses ATP and NADPH to fix atmospheric CO₂ into sugars. It occurs in the stroma of the chloroplast.

| Phase | Key Enzyme | Reaction |
|-------|------------|----------|
| **Carbon fixation** | Ribulose‑1,5‑bisphosphate carboxylase/oxygenase (RuBisCO) | CO₂ + RuBP → 2 3‑phosphoglycerate (3‑PGA) |
| **Reduction** | Glyceraldehyde‑3‑phosphate dehydrogenase (GAPDH) | 3‑PGA + ATP + NADPH

Example 2

Question: What causes the greenhouse effect and how does it work?

Response:

<|channel|>analysis<|message|>Need explain greenhouse effect causes, mechanism, greenhouse gases, absorption, re-emission, radiation balance.<|end|><|start|>assistant<|channel|>final<|message|>### What Causes the Greenhouse Effect?

The **greenhouse effect** is the natural process that warms the Earth’s surface to a temperature that can support life. It is caused by certain gases in the atmosphere—called **greenhouse gases (GHGs)**—that absorb and re‑emit infrared (IR) radiation. The main contributors are:

| Greenhouse Gas | Natural Sources | Anthropogenic (human) Sources | Typical Atmospheric Concentration (ppmv) |
|-----------------|------------------|------------------------------|----------------------------------------|
| **Water vapor (H₂O)** | Evaporation from oceans, lakes, soil | None (indirectly increased by warming) | 400–6000 (variable) |
| **Carbon dioxide (CO₂)** | Respiration, volcanic eruptions | Fossil‑fuel combustion, deforestation, cement production | ~415 |
| **Methane (CH₄)** | Wetlands, termites, ruminants | Agriculture (livestock, rice paddies), landfills, oil & gas extraction | ~1.9 |
| **Nitrous oxide (N₂O)** | Soil microbes, decomposition | Agricultural fertilizers, combustion | ~0.32 |
| **Ozone (O₃)** | Photochemical reactions | Industrial emissions, vehicle exhaust | ~0.5 |
| **CFCs & other halocarbons** | None | Refrigeration, aerosol propellants, foam blowing | <0.01 |

> **Key point:** Water vapor is the most abundant GHG, but it is *feedback‑controlled* by temperature. CO₂, CH₄, N₂O, and the halocarbons are *forcing agents* that directly change the radiative balance.

---

### How Does the Greenhouse Effect Work?

1. **Solar Radiation (Short‑wave)**
   - The Sun emits mostly visible and near‑infrared light (≈ 0.3–2.5 µm).
   - The atmosphere is largely transparent to this short‑wave radiation; it reaches the Earth’s surface.

2. **Absorption & Heating of the Surface**
   - The surface absorbs the incoming solar energy and warms.
   - A warmer surface emits thermal radiation (long‑wave, ≈ 5–50 µm).

3. **Interaction with Greenhouse Gases**
   - Greenhouse gases

Example 3

Question: Describe the structure and function of DNA.

Response:

<|channel|>analysis<|message|>Need concise description.<|end|><|start|>assistant<|channel|>final<|message|>**DNA (Deoxyribonucleic Acid)** is the hereditary material that carries the genetic instructions used in the growth, development, functioning, and reproduction of all living organisms and many viruses. Its structure and function can be understood in two complementary ways: the *molecular architecture* that gives it its physical properties, and the *biological roles* it plays in life.

---

## 1. Molecular Structure

| Feature | Description | Biological Significance |
|---------|-------------|--------------------------|
| **Double‑helix** | Two complementary strands wound around each other in a right‑handed helix. | Provides stability and a compact, yet flexible, storage form. |
| **Backbone** | Alternating deoxyribose sugars and phosphate groups. | Forms a sugar‑phosphate backbone that is chemically robust and resistant to enzymatic degradation. |
| **Bases** | Four nitrogenous bases: Adenine (A), Thymine (T), Cytosine (C), Guanine (G). | Encode genetic information; base pairing (A‑T, C‑G) ensures accurate replication. |
| **Base pairing** | Hydrogen bonds: A–T (2 bonds), C–G (3 bonds). | Maintains the double‑helix geometry and allows precise copying of genetic information. |
| **Antiparallel orientation** | One strand runs 5’→3’, the other 3’→5’. | Essential for replication and transcription machinery to recognize directionality. |
| **Major & minor grooves** | Structural features that allow protein binding. | Facilitate interaction with enzymes, transcription factors, and other regulatory proteins. |
| **Chromatin packaging** | DNA wrapped around histone proteins to form nucleosomes → chromatin → chromosomes. | Enables compaction of long DNA strands into the nucleus and regulates gene accessibility. |

---

## 2. Biological Functions

| Function | How DNA accomplishes it | Key Players |
|----------|------------------------|-------------|
| **Genetic information storage** | Sequence of bases encodes proteins, RNAs, and regulatory elements. | Genes, regulatory sequences (promoters, enhancers). |
| **Replication** | Semi‑conservative copying: each new duplex contains one old and one new strand. | DNA polymerases, helicases, primases, ligases. |
| **Transcription** | DNA → messenger RNA (mRNA) via RNA polymerase

Citation

If you use this model in your research, please cite:

@misc{priyanshu2025gptoss,
  title={{GPT-OSS MoE Expert Fingerprinting: Analyzing Expert Activation Patterns in Mixture of Experts Models}},
  author={Priyanshu, Aman and Vijay, Supriti},
  year={2025},
  howpublished={\url{https://amanpriyanshu.github.io/GPT-OSS-MoE-ExpertFingerprinting/}},
  note={Interactive analysis tool for expert activation patterns in MoE architectures}
}

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