ensure anndata/zarr returns data rather than dir if not collapse_gene_ids
Browse files- geneformer/tokenizer.py +1 -1
geneformer/tokenizer.py
CHANGED
@@ -240,7 +240,7 @@ def sum_ensembl_ids(
|
|
240 |
gene for gene in ensembl_ids if gene in gene_token_dict.keys()
|
241 |
]
|
242 |
if len(ensembl_id_check) == len(set(ensembl_id_check)):
|
243 |
-
return
|
244 |
else:
|
245 |
raise ValueError("Error: data Ensembl IDs non-unique.")
|
246 |
|
|
|
240 |
gene for gene in ensembl_ids if gene in gene_token_dict.keys()
|
241 |
]
|
242 |
if len(ensembl_id_check) == len(set(ensembl_id_check)):
|
243 |
+
return data
|
244 |
else:
|
245 |
raise ValueError("Error: data Ensembl IDs non-unique.")
|
246 |
|