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ctheodoris
/
Geneformer
like
246
Fill-Mask
Transformers
Safetensors
ctheodoris/Genecorpus-30M
bert
single-cell
genomics
License:
apache-2.0
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xet
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Geneformer
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18 contributors
History:
234 commits
ctheodoris
IchigoJiken
Update geneformer/perturber_utils.py to be compatible with different versions of the datasets package. (
#553
)
1930588
verified
2 days ago
Geneformer-V1-10M
add V2 models
about 1 month ago
Geneformer-V2-104M
add V2 models
about 1 month ago
Geneformer-V2-104M_CLcancer
add V2 models
about 1 month ago
Geneformer-V2-316M
add V2 models
about 1 month ago
docs
edit docs to remove backend isp functions
about 1 month ago
examples
delete first version of dist multitask example
about 1 month ago
fine_tuned_models
add V2 models
about 1 month ago
geneformer
Update geneformer/perturber_utils.py to be compatible with different versions of the datasets package. (#553)
2 days ago
.gitattributes
Safe
1.27 kB
precommit formatting
12 months ago
.gitignore
3.08 kB
Add gitignore file
about 2 years ago
.pre-commit-config.yaml
Safe
737 Bytes
Add pre-commit config
over 1 year ago
.readthedocs.yaml
Safe
396 Bytes
update readthedocs.yaml
over 1 year ago
MANIFEST.in
Safe
482 Bytes
add option for relabeling data from prior label class dict, update dict paths in manifest
about 1 month ago
README.md
9.06 kB
Update README.md
about 1 month ago
config.json
Safe
591 Bytes
update with V2 models
about 1 month ago
generation_config.json
Safe
90 Bytes
update with V2 models
about 1 month ago
model.safetensors
Safe
1.27 GB
xet
update with V2 models
about 1 month ago
requirements.txt
Safe
382 Bytes
specify bitsandbites version
about 1 month ago
setup.py
Safe
1.09 kB
update with V2 models
about 1 month ago
training_args.bin
pickle
Detected Pickle imports (9)
"transformers.training_args.TrainingArguments"
,
"accelerate.utils.dataclasses.DistributedType"
,
"transformers.trainer_utils.SchedulerType"
,
"transformers.trainer_utils.HubStrategy"
,
"torch.device"
,
"accelerate.state.PartialState"
,
"transformers.trainer_pt_utils.AcceleratorConfig"
,
"transformers.trainer_utils.IntervalStrategy"
,
"transformers.training_args.OptimizerNames"
How to fix it?
5.43 kB
xet
update with V2 models
about 1 month ago
