Christina Theodoris

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New activity in ctheodoris/Geneformer 2 days ago

Error in using the trainer.predict getting a tensor mismatch error when passing a dataset to the trainer.predict

4

#533 opened 3 days ago by

GalenP

New activity in ctheodoris/Geneformer 3 days ago

fully qualified imports to resolve name-space conflicts

#532 opened 3 days ago by

madhavanvvs

New activity in ctheodoris/Geneformer 9 days ago

fixed perturbed genes

12

#529 opened 9 days ago by

ZYSK-huggingface

Rverse perturbation results

1

#530 opened 9 days ago by

ZYSK-huggingface

New activity in ctheodoris/Geneformer 16 days ago

Perturbed Embedding Extraction & Inhibition Function

5

#520 opened 24 days ago by

fyan0001

New activity in ctheodoris/Geneformer 17 days ago

fix quantize logic (and lora adapter weights loading)

4

#522 opened 22 days ago by

yuz299

MTLClassifier.load_and_evaluate_test_model error

3

#475 opened 4 months ago by

saranyabalachandran

ddp_mtl_nccl_support

1

#524 opened 21 days ago by

madhavanvvs

New activity in ctheodoris/Geneformer 18 days ago

Genecorpus-95M availability

1

#526 opened 18 days ago by

ZhexuanLiu

Query About Data Splitting Strategy for Fine-tuning Cell Classification Models

1

#521 opened 24 days ago by

chenbohao

Cell_inds_to_perturb to control the range of cells

1

#525 opened 19 days ago by

ZYSK-huggingface

New activity in ctheodoris/Geneformer 25 days ago

Recreating embeddings from cellxgene

3

#519 opened 26 days ago by

habdullahi

New activity in ctheodoris/Geneformer 29 days ago

fix: pin transformers to v4.49.0 to fix ImportError: cannot import name 'AdamW' from 'transformers'

1

#516 opened about 1 month ago by

valenzuelaomar

Cell SubTypes 47/ 53 classes : How?

9

#478 opened 4 months ago by

shakeel604

Poor performance of classifier finetuning

5

#518 opened 30 days ago by

ZYSK-huggingface

Had a question to which head is the embedding extraction happening from in MTL

1

#517 opened about 1 month ago by

GalenP

New activity in ctheodoris/Geneformer about 1 month ago

Quantize issue

1

#505 opened 2 months ago by

yuz299

Discrepancy in ensembl mapping files

1

#515 opened about 1 month ago by

rgibbs

updated a model about 1 month ago

ctheodoris/Geneformer

Fill-Mask • Updated 3 days ago • 1.31k • 234

New activity in ctheodoris/Geneformer about 1 month ago

How to fine-tune your model for data imputation

12

#507 opened about 2 months ago by

cjuigne