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seq
stringlengths 2.06k
20.1k
| seq_len
int64 2.06k
20.1k
| id
stringlengths 8
11
| name
stringlengths 8
11
| host
stringlengths 0
55
| species
stringlengths 3
107
| organism_name
stringlengths 0
61
| location_in_host
stringclasses 113
values | family
stringclasses 150
values | genus
stringclasses 878
values | molecule_type
stringclasses 15
values | decribtion_full
stringlengths 175
1.62k
| 4D_Sequence_Interpolated
sequencelengths 2.05k
2.05k
| 2D_Sequence_Interpolated
sequencelengths 2.05k
2.05k
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
"GAAATTAAAACAGCTCTGGGGTTGTTCCCACCCCAGAGGCCCACGTGGCGGCTAGTACACTGGTATTACGGTACCCTTGTACGCCTGTTTTACACCCCT(...TRUNCATED) | 7,462 |
AB769152.1
|
AB769152.1
|
Homo sapiens
|
Coxsackievirus A24
|
Enterovirus C
|
eye
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
| "AB769152.1 |Coxsackievirus A24 genomic RNA, complete genome, strain: CA24v/Okinawa/5/2011|set:AB769(...TRUNCATED) | [[-1.8427466627528322,-1.7287251110642128,-1.7364381823785981,-1.6464708860034851],[-1.8427466627528(...TRUNCATED) | [[-1.745107691588647,1.0302117750318018],[-1.743836270090898,1.0131982858852098],[-1.742564848593149(...TRUNCATED) |
"ACACAGAGACGCCCAGATGAACTTGGAAGTGCTTTGTGGTAGGATAAACGTGGAGAATGGGCTGTCTCTTGGAGAACCAGGCCTGTACGACCAAATCTA(...TRUNCATED) | 6,368 |
OM453149.1
|
OM453149.1
|
Homo sapiens
|
Severe fever with thrombocytopenia syndrome virus
|
Bandavirus dabieense
|
blood
|
Phenuiviridae
|
Bandavirus
|
ssRNA(+/-)
| "OM453149.1 |Severe fever with thrombocytopenia syndrome virus isolate 14-China_Henan-76 segment L, (...TRUNCATED) | [[-1.7493957141452416,-1.7115339438032677,-1.6947267594773225,-1.76740152262492],[-1.744477988077973(...TRUNCATED) | [[-1.731070866463611,1.9096640293010474],[-1.7292356460173468,1.910032417641331],[-1.727629263497154(...TRUNCATED) |
"GATTTCTCGACCTTGTTCGTTTATCTGGTGACTTGCGCTAACTGTTGCTTTGCGTAGGGAATTTCTCTCCATAACTATTATCTTTAGATTTGGGGTTTG(...TRUNCATED) | 4,760 |
OL472234.1
|
OL472234.1
|
Solanum lycopersicum
|
Tomato bushy stunt virus
|
Tombusvirus lycopersici
|
Tombusviridae
|
Tombusvirus
|
ssRNA(+)
| "OL472234.1 |MAG: Tomato bushy stunt virus isolate STR20ST1, complete genome||Tomato bushy stunt vir(...TRUNCATED) | [[-1.7076075189078193,-1.7433506553883407,-1.7554138674769189,-1.7132247095209385],[-1.7076075189078(...TRUNCATED) | [[-1.7309340024526958,1.5621926929869114],[-1.7296822348402607,1.5669542398160996],[-1.7281743723625(...TRUNCATED) |
|
"AAGTCTTAAGTACCCCTACCCGTATTTAGAGTCTATGTCTTATTACAGACGCTCTTATTACCCTCGTAGGCGATCCTACGGTAGGCGCAGATACTACAG(...TRUNCATED) | 2,452 |
KP233188.1
|
KP233188.1
|
Homo sapiens
|
Human smacovirus 1
|
Human smacovirus 1
|
feces
|
Smacoviridae
|
Huchismacovirus
|
ssDNA
| "KP233188.1 |Human smacovirus 1 isolate Virginia/12/2011/Albemarle/G16, complete genome|set:KP233188(...TRUNCATED) | [[-1.702220841843035,-1.8077539236318187,-1.6528676935956068,-1.7891794882017313],[-1.70222084184303(...TRUNCATED) | [[-1.7363647805861535,-1.0244263103462448],[-1.7349310959496296,-1.0432556802645507],[-1.73302399059(...TRUNCATED) |
"GTTAAAATGCAATGGTCGCAATCACCGTGCAAGGTGCACAGCTCATCAAGCGAGTGGTCGAACGCTTTTATCCAGGGATAGCATTTAATATAAATGAAG(...TRUNCATED) | 3,944 |
KJ661729.1
|
KJ661729.1
|
Bluetongue virus 1
|
Bluetongue virus
|
Sedoreoviridae
|
Orbivirus
|
dsRNA
| "KJ661729.1 |Bluetongue virus 1 isolate SIC2013 segment 1, complete sequence|set:1c8922bd1e284033191(...TRUNCATED) | [[-1.6448596157027675,-1.6864877635777464,-1.7728120467064135,-1.7796472565934924],[-1.6448596157027(...TRUNCATED) | [[-1.7170421326895304,1.7905163680033325],[-1.7157536009623888,1.8116939287733962],[-1.7144650692352(...TRUNCATED) |
||
"GGCTATTAAAGCTGTACAATGGGGAAGTACAATCTAATCTTGTCAGAATATTTATCATTTGTTTACAATTCACAATCTGCAGTTCAAATACCAATTTAT(...TRUNCATED) | 3,302 |
MW384187.1
|
MW384187.1
|
Homo sapiens
|
Human rotavirus A
|
Rotavirus A
|
feces
|
Sedoreoviridae
|
Rotavirus
|
dsRNA
| "MW384187.1 |Human rotavirus A strain RVA/Human-wt/CHN/Fuzhou18-96/2018/G9P[8] segment 1, complete s(...TRUNCATED) | [[-1.6969743225702356,-1.708312957986357,-1.771430627973812,-1.7215537977698048],[-1.692569482509031(...TRUNCATED) | [[-1.726413635456374,1.547071017837233],[-1.7240364278230587,1.5443538477674537],[-1.722422580754749(...TRUNCATED) |
"ACCGGATGGCCGCCCGCCGCGCCCCCCCTGGCCCCACATGGTGCCCACCAGCTGTGATGCACTTTGTAAAGGTAATACGTGGAACGCTCGTATGCATTC(...TRUNCATED) | 2,492 |
NC_007966.1
|
NC_007966.1
|
Merremia mosaic virus
|
Merremia mosaic virus
|
Geminiviridae
|
Begomovirus
|
ssDNA(+/-)
| "NC_007966.1 |Merremia mosaic virus DNA B, complete sequence|GCF_000867165.1|Merremia mosaic virus||(...TRUNCATED) | [[-1.8090634796355065,-1.678148159701065,-1.699943852099354,-1.7571629108268918],[-1.799696564319043(...TRUNCATED) | [[-1.733071241714503,-1.5848849738252484],[-1.730803269281055,-1.565276058753187],[-1.72853529684760(...TRUNCATED) |
||
"ACGTATCTTTAGAAGTTTATGAAGCCTTGAAATAAAAAGCTATAAACCTTATTACGGTTAGTCCACCACACGGCTAAATTTTCAGTGCGCAGTCACTAG(...TRUNCATED) | 14,531 |
NC_043213.1
|
NC_043213.1
|
Equine torovirus
|
Equine torovirus
|
Tobaniviridae
|
Torovirus
|
ssRNA(+)
| "NC_043213.1 |Equine torovirus strain Berne 5' UTR and replicase polyprotein 1a (ORF1a) gene, comple(...TRUNCATED) | [[-1.886271877974224,-1.713695869289062,-1.6650838869201872,-1.7531599307365489],[-1.882760248685274(...TRUNCATED) | [[-1.7420912865543412,-0.8455014626502451],[-1.7403214258508513,-0.824268514586733],[-1.738690964746(...TRUNCATED) |
||
"GGTATCAGAGCCATGAATAGGTCTAAGACCATAACTCAAGAGGGTAAAACCTCATCAACCAATCAAAGAGTTCTTAACTCTAAAATTAAACGATCTGTT(...TRUNCATED) | 8,034 |
AB863202.1
|
AB863202.1
|
Brassica oleracea var. botrytis
|
Cauliflower mosaic virus
|
Caulimovirus tessellobrassicae
|
plant leaf
|
Caulimoviridae
|
Caulimovirus
|
dsDNA-RT
| "AB863202.1 |Cauliflower mosaic virus DNA, complete genome, isolate: GRC92D|set:AB863202|Cauliflower(...TRUNCATED) | [[-1.6453895495082658,-1.6513931016519041,-1.8330981256096133,-1.7588873644000877],[-1.6453895495082(...TRUNCATED) | [[-1.712995953437366,1.642459436913867],[-1.7114472149614846,1.6435170957621628],[-1.70965498962077,(...TRUNCATED) |
"GGCTATTAAAGCTATACAATGGGGAAGTATAATCTAATCTTGTCAGAATACTTATCATTTATATATAATTCACAATCTGCAGTTCAAATTCCAATTTAT(...TRUNCATED) | 3,302 |
JF460823.1
|
JF460823.1
|
Homo sapiens
|
Rotavirus A Hu/BEL/F01322/2009/G3P[6]
|
Rotavirus A
|
feces
|
Sedoreoviridae
|
Rotavirus
|
dsRNA
| "JF460823.1 |Rotavirus A Hu/BEL/F01322/2009/G3P[6] segment 1, complete sequence|set:ec53f74341a132dd(...TRUNCATED) | [[-1.721720556036946,-1.681290425827027,-1.7704639332257248,-1.7283806102415602],[-1.717350942482754(...TRUNCATED) | [[-1.7254396259601432,1.5692198633300372],[-1.7230776459873758,1.5670495211396944],[-1.7214733861297(...TRUNCATED) |
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