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songlab
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TraitGym

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Subset (4)

complex_traits · 11.4k rows

Split (1)

test · 11.4k rows

chrom stringclasses 22 values	pos int64 99.5k 249M	ref stringclasses 4 values	alt stringclasses 4 values	pip float64 0 1	trait stringclasses 259 values	label bool 2 classes	maf float64 0 0.5	ld_score float64 1.53 628	consequence stringclasses 16 values	tss_dist int64 0 1.58M	match_group stringlengths 5 37
1	111,238,198	A	G	0		false	0.42691	97.95	dELS	728	dELS_26
1	111,238,285	C	T	0		false	0.4269	97.953	dELS	641	dELS_26
1	111,242,504	C	T	0		false	0.090588	56.78	3_prime_UTR_variant	3,576	3_prime_UTR_variant_2
1	111,275,332	A	G	0		false	0.093093	67.236	dELS	15,518	dELS_14
1	111,353,375	C	G	0		false	0.41521	95.31	non_coding_transcript_exon_variant	6,752	non_coding_transcript_exon_variant_2
1	111,376,836	G	C	0		false	0.001904	16.621	intergenic_variant	30,213	intergenic_variant_4
1	111,505,642	T	C	0.00211		false	0.33182	40.514	dELS	2,008	dELS_7
1	111,551,032	T	C	0		false	0.024681	30.446	intron_variant	8,813	intron_variant_4
1	111,615,913	T	A	0.0006		false	0.12597	131.11	dELS	3,863	dELS_11
1	111,624,633	T	C	0		false	0.12633	132.26	dELS	4,843	dELS_11
1	111,825,444	T	G	0		false	0.002234	8.4157	DNase-H3K4me3	69,513	DNase-H3K4me3_0
1	111,848,567	G	A	0		false	0.012427	13.065	intron_variant	92,636	intron_variant_3
1	111,909,371	C	T	0		false	0.008325	18.443	non_coding_transcript_exon_variant	73,424	non_coding_transcript_exon_variant_6
1	111,956,412	A	G	0		false	0.46549	40.832	dELS	26,383	dELS_21
1	112,282,576	T	A	0		false	0.001802	6.4277	intron_variant	113,637	intron_variant_13
1	112,705,276	G	A	0		false	0.092695	58.363	5_prime_UTR_variant	278	5_prime_UTR_variant_5
1	112,851,814	T	C	0		false	0.13604	60.906	pELS	84,181	pELS_3
1	112,906,508	T	C	0		false	0.00499	24.303	dELS_flank	29,487	dELS_flank_6
1	113,947,351	A	G	0.002813		false	0.22198	111.1	dELS	3,793	dELS_19
1	114,035,531	T	C	0		false	0.053213	25.274	non_coding_transcript_exon_variant	56,056	non_coding_transcript_exon_variant_3
1	114,086,593	C	T	0		false	0.27815	54.583	intergenic_variant	65,846	intergenic_variant_2
1	114,086,790	C	T	0		false	0.27813	54.617	intergenic_variant	65,649	intergenic_variant_2
1	114,087,140	C	T	0		false	0.27432	54.072	intergenic_variant	65,299	intergenic_variant_2
1	114,087,141	A	T	0		false	0.27448	54.104	intergenic_variant	65,298	intergenic_variant_2
1	114,087,157	C	T	0		false	0.27533	54.226	intergenic_variant	65,282	intergenic_variant_2
1	114,087,193	C	T	0		false	0.27851	54.625	intergenic_variant	65,246	intergenic_variant_2
1	114,122,909	C	A	0		false	0.34268	30.249	dELS_flank	29,530	dELS_flank_5
1	114,122,916	T	C	0		false	0.34281	30.256	dELS_flank	29,523	dELS_flank_5
1	114,122,964	A	G	0		false	0.45414	37.053	dELS	29,475	dELS_21
1	114,122,972	C	A	0		false	0.45804	36.678	dELS	29,467	dELS_21
1	114,299,903	T	A	0		false	0.035481	16.914	dELS	146,022	dELS_28
1	114,746,585	T	C	0		false	0.006282	41.417	5_prime_UTR_variant	273	5_prime_UTR_variant_1
1	114,999,747	A	G	0		false	0.001433	16.405	intergenic_variant	30,078	intergenic_variant_4
1	115,426,375	G	C	0		false	0.039619	87.119	dELS	87,604	dELS_22
1	115,768,197	G	C	0.001082		false	0.29415	146.13	pELS	516	pELS_0
1	115,797,600	C	T	0		false	0.003374	24.815	dELS_flank	28,885	dELS_flank_6
1	115,993,459	C	G	0		false	0.06003	130.83	intron_variant	16,844	intron_variant_11
1	116,167,406	T	C	0		false	0.08449	35.497	non_coding_transcript_exon_variant	55,551	non_coding_transcript_exon_variant_0
1	116,684,710	G	C	0		false	0.14434	24.92	dELS	16,954	dELS_16
1	116,920,894	G	A	0		false	0.2393	43.446	dELS_flank	10,977	dELS_flank_14
1	117,001,709	A	C	0.999782	Neutro,WBC	true	0.076546	34.03	PLS	40	PLS_2
1	117,341,212	A	G	0.000859		false	0.41943	188.97	dELS	26,236	dELS_8
1	117,596,431	C	G	0.996818	HbA1c	true	0.35732	82.951	dELS_flank	9,616	dELS_flank_8
1	117,708,521	C	T	0.935863	HbA1c,MCHC	true	0.16226	123.06	dELS	102,472	dELS_17
1	117,827,760	C	T	0		false	0.010278	19.88	dELS_flank	101,822	dELS_flank_4
1	119,648,421	A	T	0.999999	Height	true	0.12796	79.417	5_prime_UTR_variant	9	5_prime_UTR_variant_2
1	119,767,245	A	G	0		false	0.41712	71.663	pELS	1,659	pELS_2
1	119,896,486	G	C	0.004921		false	0.10658	109.51	5_prime_UTR_variant	28	5_prime_UTR_variant_0
1	145,845,550	C	G	0		false	0.40036	127.32	PLS	79	PLS_3
1	145,898,358	T	A	1	ApoA,HDLC,UA	true	0.010472	5.3525	intron_variant	11,691	intron_variant_7
1	145,928,006	T	A	0		false	0.18234	37.932	pELS	521	pELS_4
1	147,085,432	G	T	0		false	0.10101	110.62	pELS	87,037	pELS_3
1	147,629,554	T	C	0		false	0.016703	78.785	dELS	17,963	dELS_13
1	147,754,660	G	A	0		false	0.22111	113.17	dELS	5,941	dELS_19
1	147,754,935	G	A	0		false	0.22106	113.45	dELS	5,666	dELS_19
1	147,873,099	T	C	1	HDLC,UA	true	0.001394	16.634	intergenic_variant	29,695	intergenic_variant_4
1	148,986,596	T	C	0.999257	Height	true	0.11034	15.386	dELS_flank	6,800	dELS_flank_9
1	149,980,298	C	T	0.000635		false	0.010287	42.231	dELS	30,376	dELS_20
1	150,667,654	C	T	0		false	0.00789	40.868	dELS	29,489	dELS_20
1	151,372,643	C	T	0		false	0.000272	143.09	5_prime_UTR_variant	39	5_prime_UTR_variant_4
1	151,716,325	G	C	0		false	0.000035	39.867	5_prime_UTR_variant	272	5_prime_UTR_variant_1
1	151,829,204	G	A	0.999513	DVT	true	0.14686	56.493	dELS	2,597	dELS_18
1	151,962,899	G	T	0		false	0.001151	16.043	intergenic_variant	29,678	intergenic_variant_4
1	152,206,676	C	T	0.999997	VitD	true	0.047889	69.931	intron_variant	17,516	intron_variant_8
1	152,227,251	A	T	0		false	0.021608	81.771	dELS_flank	3,057	dELS_flank_1
1	153,330,411	G	A	0		false	0.47902	132.97	3_prime_UTR_variant	17,458	3_prime_UTR_variant_0
1	153,658,595	G	A	0.981831	TP	true	0.40724	119.63	PLS	107	PLS_3
1	154,273,295	T	C	0.000927		false	0.00172	14.236	5_prime_UTR_variant	590	5_prime_UTR_variant_3
1	154,375,962	G	A	0		false	0.001279	7.0075	intergenic_variant	29,230	intergenic_variant_3
1	154,408,627	A	G	1	ALP,CRP	true	0.22104	110.46	dELS	3,011	dELS_19
1	154,870,030	T	C	0		false	0.00007	42.75	5_prime_UTR_variant	247	5_prime_UTR_variant_1
1	154,936,792	A	G	0.003954		false	0.42635	141.09	PLS	72	PLS_3
1	155,005,453	A	G	0.000855		false	0.13841	46.628	dELS_flank	2,650	dELS_flank_10
1	155,140,628	G	T	0.004592		false	0.37692	130.55	PLS	32	PLS_3
1	155,859,349	C	G	0		false	0.00011	156.63	5_prime_UTR_variant	50	5_prime_UTR_variant_4
1	156,054,582	A	G	0.002536		false	0.44632	118.12	PLS	199	PLS_3
1	156,080,086	C	T	0.999949	BMI,BW	true	0.13565	46.799	dELS_flank	2,378	dELS_flank_10
1	156,146,697	T	G	0.007874		false	0.27354	43.987	dELS	668	dELS_3
1	156,399,267	C	G	0		false	0.33266	28.697	dELS_flank	30,055	dELS_flank_5
1	156,686,331	C	T	0.000687		false	0.3269	42.957	dELS	8,923	dELS_7
1	156,741,833	C	G	0		false	0.43049	64.385	pELS	242	pELS_2
1	157,241,362	T	C	0		false	0.1703	113.27	dELS	102,887	dELS_17
1	157,369,654	T	C	0		false	0.27337	52.818	dELS_flank	182,800	dELS_flank_12
1	157,371,675	A	G	0		false	0.27513	53	dELS_flank	180,779	dELS_flank_12
1	157,371,766	T	C	0		false	0.2749	52.94	dELS_flank	180,688	dELS_flank_12
1	157,372,536	A	G	0		false	0.2751	53	dELS_flank	179,918	dELS_flank_12
1	157,540,601	G	A	0.000617		false	0.14293	130.74	dELS_flank	11,853	dELS_flank_7
1	157,564,216	T	C	0		false	0.045499	49.26	dELS_flank	11,700	dELS_flank_11
1	157,565,369	C	A	0		false	0.045847	50.279	dELS_flank	12,853	dELS_flank_11
1	157,738,561	G	C	0		false	0.0018	6.7371	intergenic_variant	29,212	intergenic_variant_3
1	158,125,650	T	G	0		false	0.21799	95.87	dELS	2,650	dELS_2
1	158,336,540	C	G	0		false	0.12115	127.65	dELS	5,008	dELS_11
1	158,336,678	T	C	0		false	0.12125	127.64	dELS	5,146	dELS_11
1	158,643,524	G	A	0.984844	HbA1c	true	0.009324	26.735	intron_variant	38,255	intron_variant_9
1	158,757,163	T	C	0		false	0.43016	64.186	intron_variant	2,442	intron_variant_1
1	158,870,898	C	G	0		false	0.32906	135	intergenic_variant	24,996	intergenic_variant_1
1	159,030,989	C	T	0.000857		false	0.14892	135.33	dELS_flank	15,315	dELS_flank_7
1	159,204,287	G	A	0.992433	Neutro	true	0.010487	13.455	5_prime_UTR_variant	587	5_prime_UTR_variant_3
1	159,204,893	T	C	1	Neutro,WBC	true	0.001433	151.34	5_prime_UTR_variant	17	5_prime_UTR_variant_4
1	159,707,006	G	A	0		false	0.3307	69.08	intergenic_variant	7,582	intergenic_variant_5

Subsets and Splits