index
int64 | seq_len
int64 | id
int64 | name
string | host
string | species
string | organism_name
string | location_in_host
string | family
string | genus
string | molecule_type
string | decribtion_full
string | chunked_seqs
string | relative_position
int64 | number_of_chunks
int64 | percentage_position
float64 | sequence_quality
float64 | __index_level_0__
int64 | input_ids
list | attention_mask
list |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
30 | 150,317 | 153 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
atacaataaaaataccacccggtatagcaaactcacaaaatgctgattttgacggtgacgaagaatggatgatacttgaacaaaaccctaaagctgttatagagcaaagtattttaatgtatccaactacattgttaaaacatgacgttaatggatctcctgtatatggttctatacaagatgaaatagtggcagcgtattccctttttaggatggaaaatttaacacttgatgaggttatgaatctattaggaaagtatggtattaatttttcatccaatggaaaaacagtattctcaggaaaggatatacttgaatttcttataaatgataaagttaactatcctggcattttaagtaatggtaggatagtcgcaaatgatattataagcgattttatagttgcgatgcgtggcatgtcacttgccgggtttatatctgactataaatctaacgtagaaggtattgaatttatcataaaatcatcttacgtctttaagaggtatttaagtatttatggatttggggtcacatttaaagaattacgtcccaattctgattttacaaacaaattagaagcaataaactcagaaaaaattgagttaattaaaaattcatataaaaaatatctaacagatgtaaaagatggtaaaatattacctctttcaaaatctatggaatctgacgctgtagaatcaatgctttccaacttaacaaaccttaatataaaagaaattgaagaatatatgaagacaacattaatcaataatccagataataatttactaaagatggcaaaggctggttataaagtaaacccaactgagttaatgtatatattaggaacttacggacaacaaaggattgatggtgagcctacagaaacaagggtgatgggaagggtgttaccgtattatttacctgattcaaaagatccagaggggagaggatatatattaaactcattgacgcaagggttaaccggatcacaatattatttttccatgttagtagcacgatcacaatcaacagatattgtttgtgaaacatctagaacaggaacgttggcacgtaaaattataaaaaagatggaagatatggttgttgacggatacgggcaagttatttacggtaacattttgataaagtatgcggctaattatacaaaaatttcagcatccgtttgtaaaccaattgatttaatatttccacgagagtcgatggtttggtattttgaaataagctccatttgggaaaaaatcaaagatggttttatatattcgcaaaaacaaaaaatatcaaaaaaaacattatcaccatttaattttttggtgtttttagaaccatctgatgaaaaacatgcaataagttctaaagatttatacgacatgatacaaaatgtaatcgatgacgttagtgaaaaatatttctttactatatcgaatatagattttataaagtatgtatttctaactcacttaaatccttcaataatcagaataacaaaagaaaccgctacaacaatttttaaaaaattttatgaaaagttaaattattcattaggtggcgggacccctataggtattattgctgctcaggtattatctgaaaagtttactcaacaagcgttatctagttttcacaccactgaaaagagtggagctataaaacataaacttggttttaatgaatttaataacttaacaaatttaagcaaaaataaaacagaaattattacattaatatcagaagatatagaaaaacttcaaagtgttaaaataaactttgagtttgtatgtttaggagaattgaatccagatattgtattaaataatgataatgaaaaatacataatcgatatcactatcaatcgtatttatataaaacgagcagatataactgaattagtcgttgaacatatgatagaaagatttgtatcattcagtgtattagttaaggaatggggattagaaacatatatagaggataataataatataaagtttacaatacttgtaaaatttatcgaacctgaagaattatcacta
| 37 | 92 | 0.4 | 0 | 153 |
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] |
30 | 150,317 | 154 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
tgaaaagagtggagctataaaacataaacttggttttaatgaatttaataacttaacaaatttaagcaaaaataaaacagaaattattacattaatatcagaagatatagaaaaacttcaaagtgttaaaataaactttgagtttgtatgtttaggagaattgaatccagatattgtattaaataatgataatgaaaaatacataatcgatatcactatcaatcgtatttatataaaacgagcagatataactgaattagtcgttgaacatatgatagaaagatttgtatcattcagtgtattagttaaggaatggggattagaaacatatatagaggataataataatataaagtttacaatacttgtaaaatttatcgaacctgaagaattatcactaaataagtttatgatggtattgccaggagctgcaaataaagggaaaattagtaaatttaagatccctataagtaattacaattactacgatgatcataataaaagtaggaaaatgaataaaatgacagttgaactgatgaatttgaaagagttgggaacctttaatttagaaaatgtaatagtatatcctggtatatggaatacatatgatatatttggtatagaatcagccagatcatacttatgcgaagctttattaaatacatacggtgaaggatttgattatttgtatcaaccatgtgacttattggctagcttaatttgtatgagttacgaacccgaatcagttaataagtttaagtttggtgttacaagttcccttaaaaaggctacgtttggagataacaaagctctattaaatgctgcattacataaaaagactgaacctgttaatgataacagcagttgtcatttctttagcaaggttccaaaaataggaacagggtactaccgttattttgttaacctagaattactaactagattggaaaagaaactttctgttacaatatctgatagaaaggttgaagaattaatcgaaaaatccgacgagttttaactttttattcattaataatatacttatcaattagttgttttctaaaagagggattttctataaatgcgcctcttttttctctcatagagtggtatatatataaaaaatatataaacgcaggtatatctttacttctctttgacattaaatatgccattatcatcgcaccacttctattaacgccggcaacacaatgtactaacacaggataatgttcttcatcacattttgataaaaaatttgtaacataatcaaaatgatcatttaaatttgttttttcgtcatcaataagaggcatatgaataatatttatacgtgaatcattaaaacaatatttttctgtagtaagatttaaaatatatttaaaatttacatttgaagatattgcattaattgcatcatcataatttcctaaatatacataatccgttactctcatcatctttgtcggtgccttcgctttgggtagagaacctgtagactttagtaaaacgttttcgtaaagactttttttatccatttataatggctacaaatggataaaacaacattaaatgttaatggtgttgaattagaatacgctagagaaaaagaaaataaaacaatacaaacggctaaaacctctactttatgtttctttatgttaattttaggtattagtatactattactttggtttcaagtatctgataattctattttctcagaattaatgaagtatatacggataaaaaaatctataagagggtggaaacctttagttgaaaccaaaactaacttagaaagtgatagaggaaaaatgttatcaatgggaagagatgagtatttttcttttaattgtgtagattttggttcttattttgttcctattagattagatagaaaaacgtttttaccacaagctattagaaggggaaaaggtgatggatggatggtacaaaaagcagataaaatagatgtatccgcacaacaattttgtcaatatttaattaaacataaatcagaaaacataataacgtgcggaacccat
| 38 | 92 | 0.4 | 0 | 154 |
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] |
30 | 150,317 | 155 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
atgtttctttatgttaattttaggtattagtatactattactttggtttcaagtatctgataattctattttctcagaattaatgaagtatatacggataaaaaaatctataagagggtggaaacctttagttgaaaccaaaactaacttagaaagtgatagaggaaaaatgttatcaatgggaagagatgagtatttttcttttaattgtgtagattttggttcttattttgttcctattagattagatagaaaaacgtttttaccacaagctattagaaggggaaaaggtgatggatggatggtacaaaaagcagataaaatagatgtatccgcacaacaattttgtcaatatttaattaaacataaatcagaaaacataataacgtgcggaacccatatgattaacgaaataggatatagtggctattttacaaactctcattggtgttcggattttcataatcttttaaactaaattatatacgtaaataacatacctgctaaaaaccatagtaatttagaattcaaatcaaaaattatcattattataataaataaaataataagtgctcctattatactaatatcaaatataccaaaaaatgaaaccaatggatgggatacatagtaagaaaaatcaggaaatctatgagccatccattttccaactctattccatataccgtttttcatttcgttagctcttttttttgacaaatacttagtattgtgaagtatatacttagatgagtcatttaaaacttgtctattgagttttaattctttttccaacttatacatttcaaaacttaaactggtagaaatacctttattttttataatttcgtttattatttttatggcagacgataatctaattacatatgcggataaggtaaaatcatatccccctgtgtacgaatacataaaattattattttcttgattgaacaatattctagaattactattatgaaaagtttcacgtaattggaaaatgtctatatttttttcttgcatttcaattataatgttatgtattgttattaaatcttttaatgtgttatcatcttctataacaacaataaacttattctcagaattttttatatccgcatcggcatacgatttccataaactaaagtgtttcgcaatagaactttttgcctcttttgtacaaagagcattacataatccagaaaaatattctgtaaaattttcaacacctcctgatttttctaccttttcccatataaggaacttatatgataaactgatatcttttttatctttaaaaaaaaaatttacatctgaatttttaaaatcttttactgtgtcaacttttttataaaatatatcattgtcactttttaattctggaactacatctgaaatttcgcgaccaacgattggtataacatataatgggatatctgccatttttgataattagttatctaaagcactatttagttattaaaattaaagaagtatagctctctaattttagttatgttttcatctatccaaatagaaacatcatttacgtatcttgataaaaatctataaaatgtatactctaatttatctctattaagcgaatcgctaaaatatacaaaaacatcactttctggaagcaagtggtaacggaataagttgtaacaatttactttactctgtacatgatatttatctacaagttcgtcatcaaaaggaaacggatctccgaatcgaaatacgtataatgatgggatagaatagtaatattttaaaacattatttataaataagctttttaacgcgattatcatttttttcctttctatttctatttttaaatgcgtcggaaaaataactaatttagtagcgtttgtgtcgttgtatctaatcaaaacttttaattcatcatcagatgttatctttttaaattgttcccacatttccttcgtatcgtttaaaataggaatagggtgagcaataatattacgctttttatttttgttttcgataaccggcatattgttcacgataagtgtataactttc
| 39 | 92 | 0.4 | 0 | 155 |
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] |
30 | 150,317 | 159 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ataaaactagaattagttaatttagtacaaactaaagtaaaaaatatagtggttgatttcaaaattaaatattttttagggtctggtgcgcaagcaaaaagctcattgttgcatgtccttaaccatcctaaatctaaacctactcctactttagaatttgaaatcattacacgtgaaaaaaaaaattctcgtgatatattactagatgaattacatatactttttaaaaatatatttatggcagatccaaaaaatgttttcctccctaccgttatttttactagtcctgtaaaaactataatgttaaaaaaacaagaaatacataatatagaattggataagttatatattacaacaaagactgatggggttggtactttaataaaaattaataaaaatggtatattttgttattttactcacctaaactacataattaaatataacctgttacgtaagtttgacgatactgtaatattatacggagaggcgataaaacaaaatcaaaaatggttcatatacttaataaagttattgaaaccagaattatctaatagatttaaagaacgagattttttgatagaaaagttgacaagtgatatatcggatagaattgtgttcaaaacaaaaaaatatgaaggaccgtatgaaacacattctgaagttatagatttattatctacatatcttccattacaaaccgaaggcgtgattttgttttattcagaaggtaataaatcaaaaatagattataaaattaaacatgataatactaccgatcatatgataaatgccgtatatagatatatgtcaagtgaacccgttatttttggagataaatatacgtttatagaatttaaaaagtttagcgacgaacggggatttcctaaagagcatggaacgagtaaaataatactaggggataacataaaatatttaaacaatatatattgtatcgaatttaaaaatatttataacgatgtaggattaaaaaatatagttttaccgataaaatttatttcagaattttcatttaatggagattttttaaaacctagactggataaaactatgaaatatttctataaggagtattatggaaatcaataccaagtagtattagaacatattagagatcaagagttaagaattaatgatatttttgacgaaaataaattatctgatttaggaaagaagtacgtagacgacgaatttcgactgaatccagaagtatcttattttactaataaacgaactagaggcccgttgggaattttatcaaattatataaaaactcttttaatatctttatattgctctaagacctttttggataatccaaataaaagaaaagtattagccgttgattttggaaatggtgcagatttagaaaagtacttttatggtgaaatagcattgctagtagcaactgacccagataaagacgcaataagtagatgtatagaaagatataacaaattaaattcgggaataaaatcaaaatactataaactggactacatacgagaaacaatacgttcaagcgtctatgtttctaaaatacgcgaagtgttcttttttggaaagtttgatattgtagattggaactttgcaattcattattcatttcatccaaaacattattctacaataatgaaaaatttgtcagaattaacagcacctggaggtaacgtattaataaccaccatggatggggataaactgtcttatttatcagaaaggaaagtattcattatccataaaaacttaccgagtagtgaaaattatatgtccgttgaaaaaataagtgatgataaaatattagtttataatccatcttcgatgtctaagccaatggaagaatatattgtaaaaaaatcagatataaaaagagtattctcagaatatggttttgtgctaatagattgtgttaattttgatacagttattaatagaagtaaaaaattcatcaattatgtttctaaaatggaagaacgacaatcaacaaaaaacttttttgaacttaatcgggaagcgttaaagtatga
| 43 | 92 | 0.5 | 0 | 159 |
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] |
30 | 150,317 | 160 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
caataatgaaaaatttgtcagaattaacagcacctggaggtaacgtattaataaccaccatggatggggataaactgtcttatttatcagaaaggaaagtattcattatccataaaaacttaccgagtagtgaaaattatatgtccgttgaaaaaataagtgatgataaaatattagtttataatccatcttcgatgtctaagccaatggaagaatatattgtaaaaaaatcagatataaaaagagtattctcagaatatggttttgtgctaatagattgtgttaattttgatacagttattaatagaagtaaaaaattcatcaattatgtttctaaaatggaagaacgacaatcaacaaaaaacttttttgaacttaatcgggaagcgttaaagtatgacaatatagatatagaagaacttctaaattattatgttgtttatgtattttccaaaaggtaaatagtatggaatagttgatatattagttagtttattaaacttaaacgaattaaataagtgtaacaatattaaaagaataccttcggaaccgtttggtatctcggttaatggtatcaatgcattcttacgttcaataatatttacactatatgtaggaagtagtgcatttgtgctttctatttttttttcgtcgataaaaattttttttaaaacatctatatcatttctatataaaaattttgcaattttaaaaaatgtaccattgtcaaatctagccatagaatcatatatatgaatagcatataaggtttcatctaatcctttttccaataacaaaaatttttcgttataaattttttctatatctatagggcatataatattcctttctttaataatatttgttaatcttttaatttcagattccataatgaatatttgtataataaaaaataacgaatatccaaaaactgatttgcatgacgtaacattttttctattgggaaaccataaaggtttttttgaaaatgttttagaaaaaattaataaatataaatattttttttctcaatatgaagtaagttcggacaacgatggtgtgttagaattaaaaaatgtaaagtcttctcacattattaaagatagatatgttacaacaagagaatttattttgtcaggatgccaaaaagaatggtgtaatgaaattattcaaaaaaatgataatatcactaattacgatacaataataatacaagatattacttattttgaaaaaaaaatatggaagaggttattatttgtcaactgcccagaaatgaaaaatagttcatatgaaatctttttaataaatccatttgtaataaaaaacaacacagatatatttaaaaatttgattttaaggtcatcgattaactatttcatatttgataattatgcgccactgaaaaaaattttaacgcatatatacccatcctttaatatagaaaaaacgtatatatatataaactttaacgaaataaataatattaaaataataaaaaaatgttatcatagaaataaaattagagctttcgtttatgcgtggtttaattttcaaatatgtgaaaatagtgaaatagaaaatgaaaaggtaaaaaaaaaatacaatgatttgtatagcttaatatgaaaaccataaaaacaaaatcttttccttattgtatagaatatcatgacgattgggaagccgttattaatcaattggtagatttatacgatgagatagctgaatggattttaaaagatgaaacatctccaattccggaaaacttctttaaacaattacggaatccacttaatgataaactagtgtgtatatgtggaatagatccgtacccaagggatgcgacaggtgttccgtttgaatcaccaaatttttcaaaaaaaacaattaaatcaatagctgaaactatttcaaatataacaggtattagtaactataaaggatacaatttgaataatgtaaaaggtgtatttccgtggaattattatctaagttgtaaaataggagaaactaaaagtcattcattacactggaaaaaaatttcc
| 44 | 92 | 0.5 | 0 | 160 |
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] |
30 | 150,317 | 161 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ttttccttattgtatagaatatcatgacgattgggaagccgttattaatcaattggtagatttatacgatgagatagctgaatggattttaaaagatgaaacatctccaattccggaaaacttctttaaacaattacggaatccacttaatgataaactagtgtgtatatgtggaatagatccgtacccaagggatgcgacaggtgttccgtttgaatcaccaaatttttcaaaaaaaacaattaaatcaatagctgaaactatttcaaatataacaggtattagtaactataaaggatacaatttgaataatgtaaaaggtgtatttccgtggaattattatctaagttgtaaaataggagaaactaaaagtcattcattacactggaaaaaaatttccaaacttcttcttcaacatattactaagtatgtaaatatattgtactgtttaggaaaaactgatttttcaaatataaaatctataatagaagttccggtcactacaataataggctatcatcccgctgctagagatagacaatttagtaaagataagtcttttgaagctataaatatattattagaaattaatggtaaagaaataatacattgggaagaaggattttgttattaggtttaagctttagtgaaattttaactaacttgtgtattaaaaatggcaagtcatttagtcaataatgagtatatatttgttttaaaaaaaattggcgttcatacatctcatagagagagtgaagatccgaggtttgttgatatttttacatgtgaagaattagaaaactatatattaaaaaatccatcatgtacattattcgaaacattaagagatgaagaagcatactccgtagtaagagtattttttgacgttgatttggatattgtattagatgaaatagactatactgcagctttagaagatttcatattaaatgttacaaaatttgtatctatattttcttctcgggaatgtggtacgaatcaaaatattgtgttaaaatgtatgagatcaaatttttcgcttacaaaatctacagatactagtcgtactagttttcatatagtatttcccgatacttacacgaatatggatactttaatttatatgaaaaaaccattattagaatttttaagatcgtcagaaaatccattaataagatcaattgatcctgcagtgtataggagaaaagcaacactaagaatagttgggacgcgaaaaaatccaaacaatgataaaattcatattagacaaccgcctcacaacaatatatctgattatttgtttacttatgtgaacatgaatgaaaaaagttgttattttacattatcaaaaaaagtagacgataaaaaggcagatgtattatgggaaccaaattatatacactttaatgatgctatgaaaaaagtttctaaaataataataaacgaaattgttaatataaacgattttaatgtgaataactttactagtattccaataataatagattatattatgccgtgtgcgttatgtaaaaaaaaaatacataaacatcatcatcaacttacattaggaaatggaattttaaaaatatttaaagctggaaatcctcacagttgtaaagttaaagcgatagcattagaaggaaataagctatttactatatctcagcttataatagattcaaatgttatacatttaacagaacgcggagatcatgtagtatggataaaaaactcttggaaatttaatacagatgaaccccttataactaaattaatattaaatatgaaagatcaactaccttcggaatatataccagatatattatgtcctagaaaacgtaaagtaattgaaaacaatttaaaagatatgttggttgatacaatcgagacagatacatacccttttatgcttccatttaaaaacggggtattggatatatgtagtggtaaattttacaaaggggcagaatcaaaaaaatttatttgtactgtatcaactggatttaatttagacattgaacagtatttaaatgaggattcgcaag
| 45 | 92 | 0.5 | 0 | 161 |
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] |
30 | 150,317 | 163 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
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| 47 | 92 | 0.5 | 0 | 163 |
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] |
30 | 150,317 | 166 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
gttattaacaattggtgtcgcagataaacatataagcttatggttgtgatacgctatattttttactaagtaattatatacagattttgtaggacgtatttttccatcctctttaattaatgatttagaaataaaattgtgacattcatcgattattacacatattctgcttctaacatttatagtttttatgtttgtaaagaacttattgtgaaaatttttatcatcatatgttataaaaatacagtctttgattatctcgggagaatatttcattaatgtattcatccatggatcatcgactagtgcttttttaactaataaaattatggtccaatttgtataaaaatcttttaaatgttttaaaataaagacagttgttatggttttaccaacacctgtttcgtgaaatagtaatatcgaatgcattttatctaatcctaaaaaaattctcgcaacaaaatgttggtacgattttagttttattttgtttactggaccaaccatttcaattggcattttttccgtagtgcgtaacgcatagtctatgtatgcggcgtgataactactcatatttatttaatattttgttatagtaatcataataaaattttaactaattttttttgatattcattttcaatacttttattttccgaagtcatacttgaataaagtaatgaatgtacataatatagtgattcgtaaacagatgttgaaaactctaaaaacttgtttatgaattctttatctactggatactctaatatgttaaattggacattgttgacatccttccaaatagaagattttgtagttttttttatttcagccataaaactatcaaaattttttttatatggttcgctcgctaccataatcgcactatcttttaaccaactatcactcgcacatttaaacaatcgtaccgacttgaataagctacaatatacccttaacgtatcgacaatacacctaccaaacaacgttggtaattttattatacaaaacttttctacagacatttcaaatagcggtctaaatacttcaaatgtcaacattttatagtcactcacataaaggttattctcgtttaggtagttattagattttattaaatctctttcttttttaaaaaatttatttttagcacttaaatctgcaacgacagcgtcggcttttatattttttccataagattttatagattttatatttaaaatttcatatactttttctaaatcggtttctggtatcattaaatcatgtgtaaataaacttaataaatccgttggtaatctattcaaatcatttactcttgataattgtaaaaaataattagttccatattccaaactaggtagaggacttttccctaaagttaagtttaaatctggcaaatgttcgtaaaaaggcaacagaatgtaaattccttctttaatattttttataacgtcatccatttatttattaggtattttgatttcattattatactattttttattcttccgttattttgataacatttataccattttcattagttactttgtataggtcattacaaactaacacaatttgttttgatacataataaattggattatttggatcaaatgatgaaaaaataactctaactgagagtttatcctttcctctggctgtattagaaacaatagtagttggtttaaagaaagtatgtggtgtaaagttaaacttcaaagtccttgtacccaatacacagtttgatagtagatcgttataaatttttgaaataggattagtttcagaataaagtacatcatttccaaatctaacttccatcctagaaataatatcagttttatttttaaaatctattcctcttataaaaggatcgttaataaataaatctttattttttgacgattctgatctattatctccattataaacgtttcgttgacacgaccataaattaaccggaatagaaacatctgtaatactaatagagtgtgatatatgagaaaacataattctttttgtggattcgctataacttccag
| 50 | 92 | 0.6 | 0 | 166 |
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] |
30 | 150,317 | 169 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
tgcccctttaaaaatatatccgtgttattagtatggcattcaaaaaagttatcgcctactttataacatacagcagattttaatttgtacataatgccgttaattacaacttcttgagataattctattggagaatcatttatgattgatctatatccagtgtaacactccccaccaaatgtatttctgtgctgtctacgttcaacgtaaaaaattaaaacaccattaacaataactggcgaactgatattcgatattgttgggaaattattaccaaaagcattaaaatgattttctaaaggattactataaccatatcctatattaggtggtgcaaaaactaccctgccagtatttccatcaaaagtaagtgaatttatgttacccgtattgatagaaattggacaatttgaagtagttatcattttcattggattgataacgatatatggcacagattgcaactgcatttcataattattcataaatccaggtttaggaatcgaaacaagtgttggtttaaatcctactattgataatatagatgctattatttgttcttcgtccgacataacttctgaacagtttgtgtgaattatcttcattaagaatggatctattgactcttcatcactgcagtaaaaaattcccattctcattctcattataagcttttttatcattgtatgaatgttagctctttgtatttctgtagatataacatctgaaatgccagtaaatacaattggtgcttcctcagtaagtctattaactaaaagcatataattatccggattaacttttttgtaatcgtaaagttgttgaagtaaactataactatccccatatacaaatgtattttctaacgccggtagttttacaccaaaaagcgacataaaaataggatgaatgtaatatgttgattcattatctctataatgaaatgctaaatctgatgagctagacatatcaacaaagtggatagattgaaatcgagttgttgataaaagtatttcttgcttagttggagagtataatttttctaattcttttagttgttcacctattttaggatgtgcatgcgaatgaattaaaactaagggatgagtgctcttaacagacatgctggagttagttaacgaacttttaacatgtgctaaaagttcaaataactcatttctattagatctcattatatttaattttcgcattattgtgagcatgtcttgaattgtaaaattagaaacattgcatttgttatccgtcaaatacctcgctatcatattaccatcttttcttaatttaacttgccaatcattagttgatgcgacttcatcgattggcacagttgctgtatcggtatcttcttttttgttgttaggacaaggcaatgatgtttcgtttgttttatctttactaagaattctccttttcattggtaaagatctttgtctagcccctgctgagataatatcgtcggatgttgcaaaatttgatagtgaattacaaattgaacaagatagtgatgtaattggagtatgaacatggttatctaccaatgatagagtttgatttttatattctgtatgtaagttaacttttgaagttagaaatatatctttactagattccatttatattcgaagtttttactaacactctatatagtaatactagttttttacataatttattttgtcagttgaagtttatttgctgttattagttttttacataatttattttgtcagttgaagtttatttgctgttattatcatccagtttgtctatattaaatctcttttttaagtcattcataattgagtttatagcatcaaaagttgtatctttagcaactgaaatatctttaataagtgaatcagaatcatcttgaagtgatttagttttatcttttatatctttcagttcctttactagttcatcatggctaatagattttattttttttaacggatcattttgttttttttcactacattgatcgttgagtttattactgttgtttttgatttctatatttttgattt
| 53 | 92 | 0.6 | 0 | 169 |
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] |
30 | 150,317 | 171 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
tggtgaatatttctctatactcagttaatttacttttatcagttacaagttttgaatcaaaaacagcaattatttttaataagtaattttcatcagaaagaattttatttattgtcttaacaataaaactatgattattttgcaaaagtttataagcactactttcacaattagtatttttaatttgatttataatatcgataattttttttgaatcagatactatttcggcagtgtcctgttttaaatttatatacatattattaattgatataagtgtttgtacattaattaacatgtccttaaatatagttttaaatttttctttttcgttttctaattctaacttattataaacagatttaactacagcgtcagattttaaaaaccaaaaagaaaataatttgtagttacaatacttcatcattaagataatatcttcatcttttgttgaaactgatatagttgatgaaattttcttttctaaaacaggtactaagttcataagaatagaaacatctgattcaaaatttggatcagatgttaacacattagtttctttttctaaatattttttactaatattaaaaaaatcataatataatgtcctcagtttatccatttattgtaaaatatagttgtttaatttgtcatcgacttaccgttattcggataatatttttcaagttttgttagaatagaaggatccatttctatatctaatcccagttttaacatgatatttattaaccaagttttagtaaatctgtcttttgattctgtaactacatactttaaaagtggagaaaagtacttatgtaatttatacgatgttgttatgttttttgtaaatgttacataatttgaagataaatcttgattaaattctttaccatcaattaaaaatccatctgttgtcaaatccattcctgaatcagaacgtattattattgattttgtttgtctaggaaacagatcttttattattttataatttggtggaaaaatttctataatatctttatcaagtgttttctttaccataacaatttcatggactatttcctgaattaatatataaactttatttccaatatcaaaataattcattggaaaatatacaatatcgtcagaaattaaaatatttttatcttcattaacaaatgaaattatatccgatattgtacgtatacgtttaatgttttcattttcacatgatttaactacatgatatccgcttgtttcttttagtcttttattatcttgttcaaatattatttttaatccatcattaaaaaatgtatcaaaaataatgggtaaaaaggatatctttgatgttgttaccacctttccaaagttgagtatatatggatttattacgttactaataatatctttttggtatacacacgatgaaaaagtttcagtgtgtgattggtctttcaaaaaacaacaaggtatacacattttttgtaatctatgaaagatagataaaaatcctatattattatatttacccaacgggtccaaacaggaaaacataattccattagaatttacaaaaacttcctttgtgcgtgatttataaaaattatcacttatttttttcatatctccctctaaagaagagacgatcactggctttctatgtttgtttttggtgttttgacatatcctagaccagtatacggtttcaactttagtaaaatcagatgattgttgtatattattaaacatattattaactgcaataactaaaaatgtaaaatatttttcaatattgggaatgtagtttttaacttttatagatatgtggttttttgctaaaataattgatattctcttatctgatgaaagcagtatgttgtttgtagctgtttcaacaaatataaaactggtttctatatcaagttttattctagacgtgattggcgtagataaaaaaattttatacgttacgtcgcactttatacgttccatttgtgtatcaatatctgataataaactagtaaatagtttgacattgtttatcattattgtatctccat
| 55 | 92 | 0.6 | 0 | 171 |
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] |
30 | 150,317 | 174 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
acgccgatattagtttatcggcttcttcctttgtacagctagcctttactaacatattatgtatatattgttttgatactctaggtcttacgcttattattgtatgattattgcttccaattatagatttcttaatactaactttaaatcccattgccgaaaaaaggagaatggaaaaatcttgataagattccttttttattaagtgtggtgaaccattatcgtcaatttttaatccagcgtatagcattaaaacttctttaattgataattctggagatttattagtaattaatctaagtagttgaaaaaatctcataaaactattctcagacagtccgatatgcattagcttggacgctggtctttttggaaaatctttcttagatatagagtttacactttctaacacttcagatattagttttgataccgtctttcctgatagtactctaggtagtaaacatacccttaaaggtgtttcatttgatgagattacgtccgaaagcattgagcaatatgttgttccgtttttgttgaacaatgccatcacataacatgttgcattataaaaaatgatatcagatattttctttgatttatactcttgatagtcgataccgtcccaaaatagtgacaatttagatgttaattttctagatctggattcctttgccaacaagttaagtaaatttatataataatgatctcgtccagaaatatcaacatatttaatatttaagttattgagtcgatggatgtatctgttatttgttgcggtgtccaataaaagaagatcggcataatcttgtactgttaaatctggatataattcaatcagtttaggtatttgatcttgaaatcgcatagaagttataatactaattaagtcaggaatgctattcagtacataatctccattaaatgttacgtagctgttttcgtattcgttagaaaagtactgataataaataataaagtgtttcatagacattgtaagaatatcagtatccattgctcgttggaacggtggcaatgtggtattgtgatcaattgcggcatcaaacattttaaattcttcatcaaacttattaattgatcttgcatcaataacccttcttactcccaatagattttcgaaatctctataaaacataacaccgttagattttcttactctaaaaccttgtatactagtagacaatacatccttatataaaaggttcaataggtatgtattttcaaagtttaaatctgggtgtattttttcttctacttgaatatcgaatccgccttctactggtttaacatatccgcctacaaacctagaattatactcaggatacttaagtctgtacattagtagttctctagtaaattttggaagatcgttaaaactatgtgtgttcacaattggattattacttgaatcaaatttaggaactacatcattaggagtaatatatccaggattaattacattgtgaaaaagtttgttgctagaatatacatctaataaataatttattcctagtttttctatagaattttgtatttcattttcgtcgcatatctttccataatcaggatgtaacaacacatcaaatggatgcacgtatgacgttttcaaattttcatcaactttataatccaaacataatgatggcaaaatagatgatattactttaaaaagatattccgagtcttctaattggtctaatgtggtaactgcgttaatgggcatcatttatttagtattaaatgacaactataccggttacagatattcctaatgattatagcgttactgcgttttctgaagatggatatccatcaaataaaaattatgaaataactactggtcaactatctattttaagaacagtaaacgataaattattggcaaaaacgaaatcgccatcatttacagaattagaaatagccaactctcctgatttttttataccaggtgaggattcacctattaccataatagaacacgtcgaatctcctcaaacaaaatttatagataatagtttaaaatcgga
| 58 | 92 | 0.6 | 0 | 174 |
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] |
30 | 150,317 | 175 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
atccaaacataatgatggcaaaatagatgatattactttaaaaagatattccgagtcttctaattggtctaatgtggtaactgcgttaatgggcatcatttatttagtattaaatgacaactataccggttacagatattcctaatgattatagcgttactgcgttttctgaagatggatatccatcaaataaaaattatgaaataactactggtcaactatctattttaagaacagtaaacgataaattattggcaaaaacgaaatcgccatcatttacagaattagaaatagccaactctcctgatttttttataccaggtgaggattcacctattaccataatagaacacgtcgaatctcctcaaacaaaatttatagataatagtttaaaatcggaaatagtattagcagaaaaacaacgacaacaacgcgtaaatataagggtatcagggttagagacggtgatagaaaaagaacctatagaggagcacatgcgaataacttctattccatctaaaacaccatcgcttggtgttatgtttgataaagataaaaggataaaactactagaggatgaaatatatgaacttaaaacacaacaaagtaaattacttaatactaataataatttagataattttacaaaattattatttgggaagaatatacaccagtcttcagaaataaataaaagaatagcgatagttaactatgcgagccttacaaaatctgaattaacattggaagatttagaaatatgttctgaagaagaaatagataaaatttataaagttgtgaaacaacataatgatagttataaaaaaagaattatcgtgacccattttataactattataattataatattggaacaaatattagtcaaattaggttttgaagaaatgaaaggtgtgagcaacgaacttacatcagaaataattgatttaaacataggagaagattgtgaagcgatagctgtaaaaattggtatagttaatagccccattattaatattgttatattcttaattaaaaaacttatgacaaggataaaactttgttaatccataccatcgtcgatagagtcatcggcggtttctactttatacattccacgtttaattaactttttttttgattgtgaaatatttttgtttcgtctaccagcatttactgattctattcctaacaagtcttgatttatttcacctaccataccttgaacttctaattttccttctttcatggttccgtatactatttttccgccatttgttactgcttgcattatttgatcagtttcgttaaatgtatttctttttttaaaaacagctccattattaacacttttcgaagaacatacgttaccgcttctcgaagtagtttgtttattactgcaagattttgattttttatttggttttgtcatacaagctttagttttcacattgccagcttttacttcattctcatctgtattattagtagtattatcctctggagtaagatttgatttttgagatgcttgttctccactaatgtgggcaagaatggtccttagttgaggggttagtttatttatagtttcgatataatcatcataactgcttcgagataattttttatcagacatggttataaaaaacaaaacaaacaattttttcttatattataatttatataatatatattttttttttatttactagaaaataatttataaaaagatgttaaatgtttagattccaacttatcaacatatccagtttttaactcattcattttttcatatttctcagcttcgtgattttgattagtagtcgtttttttgttatatattccataaactattagtcctattactacgacacaaatgatgactaaaaatatatcaccaatcattatttatgtactaataaactttctattattatactccatatagtatattttttttaaaaaaaaataaacatagaactatttttattgtccgttaagttctatggcacttgaattgtatctaccaccatctatcaaaaccttat
| 59 | 92 | 0.7 | 0 | 175 |
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] |
30 | 150,317 | 176 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
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| 60 | 92 | 0.7 | 0 | 176 |
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] |
30 | 150,317 | 178 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ccttagatggtgttaaaaagttaatggataagttaaaatttgaaaacgttgacgtgttgataattattaataggcatttatctaatgaagatttttgcaaaaaaatatatagcgattatgatacttttatattagacgaatcacatatgtataatttaatgaacaattctatactaactagatttttaacattttatccaccaaaaatatgctattttttaacagctactcctagaaaatataacaggctttattgtaatgaaatcgttaacattttaaaaattactgatatggtaaagacaattaaagttgttgaatacttttttgaaaattattcgtctgtatctatacgtaaaatgttaaagagaaaacttgacaatgataagtatcatatatacactgaaaaaatactatcagaagattctccaagaaatgaactaatattaaaaacaatttttgaaaattttaaaaatgatatcataaaaagaactatagttgtaacaaaactaagatcgcatatgatgttattatatagcgagctaaataaaattttgggaaacgagttggtatttttaggggatgcaaaaaacaaaagctcatatgacgtagtaaaacgtataagggaaaaagaaaaatttatatttgtttcaactattaattattctggtactggattagatataccaacattagactctctaattttgtgcaacgtagtattaaacaccattcaagttgaacaactatttggaagaatatgtagagaaagtgaccatcaaaaacgaatcgtttttctatttccgactacgtcaataaaagaaattagacacttagttgggttttttacacaaaaaataatatcgttttcaatggaaaaattaggatttgaaaaagcgatagaaggaaacgatagaggaaaaaaagaacttgcgttatgtaaagcacttaatttacaaacccattaagcattctaagttcagacccacatgcagaacatgttaatatatttccctttccaccaactttgtattcatttaatgatacctttgttatatctgaaacttttactaattttgaataacacgatgagcatgtcatgcattcttcatcttgtacagttgtttttggttttcgtttctttctgcgtttattacccgcactatcttccatttatgtagtaaaaaataaatttaagtaagcatttgaacaggatctcgaaaagtttactatatcattatcattattttcacacgataaataattatttttatttgctttttttatttccgaacaccttagaggtttttgtttattattatcaagtaacatttttgccgataatcctgaaatattaaaatcataataaaaaaggttattgtctacacaaataaaatccttttttatgtttttatattttgtatatgcgtcgtattcacgtttcaacttttcagaaacagtaggtatgataatattaaaaataagaatgaaataacataaaattagaaaaaggcttatcatgactacagaaagcgatttaaaaaacttaaaagagttactaaaattaaagaaatgtataaatatagcagaccaaaaaacaagggaaaaatataattctatcgttgaatgggcatcgaataagttttggaaaataaacactcataaggttatcgatgccgaaacttctattagtgattattacaatacttcaaaaaacgaatcatttattttaaaaaatggtaaatatgtatttttacccatgtgttttggtaatatatttatttattttaaaggaactatgatggaactcggatctggaaatatacaatatattgatattaaaattaaaaaaaagatagataagttattaaaagaaaacttagatatagaatttcttagatttgtgtactttaaaggagagtggatattagaagattgtttttcaaaatgtaaatgcccaataaattttttaaaaacggcatcaactaatggtctaaacactgttccatacatattattaaatactaaagaaataatatttacagaagatg
| 62 | 92 | 0.7 | 0 | 178 |
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] |
30 | 150,317 | 180 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ttaaaaataataatggatgaactatttacatttttacataaaatagagaatgagtattctagaactatatttaattttcaccttataagttataaagacaagtacaaaatatatgatataatgaaagaaaaaatatcaatcgaaaacatttttaacaatatagcattaactgatgaaattaagaatcatattaaaaagttggtttattgtgatatccatttaacaaagcatattataaacaatacagtttatcctaaatatgataatttaaatcaaaacaataatttaaaattttctcaattttttgatatcaataaagatgatgactatattagtttaagaactgctgaaatatttgataatgataaatcatcattaatatcttatataaaaaccaccaataaaaaaaaaaaagttgattatggtgagataaaaaaaacagtgcatgggaacacaaaaaattattcaaattatttttccggcaaaaaatctgacgattatcttgttacgacgataaatactaaagaatcacagccatggataaaaacaatttctaagcgtatgcgaatagatattaaaaaaaatgcaatcataacaaagggaaaaagttcaattttacaaacaatagaaatagtatttgtaaatagaacatgtataaaaatttttaaagattcgacgatgcatattatattatcaaaggaaaaggatgaaattggttgtgttggaattataaataaaatatttcaagtatataaaatattgttttgtttactttacgatatttcaaaaaatgaaaattttaaaaatgcatttgataattctgtatctattttaaacttaactaagtttgatgataagattgcaaaaataaaaacagtaaaaaatgaatacgggtttgaaaactttaaaattggaatgtttaatttaacatataacaaacctattttgcatacagtatttccgtcgttattagattacgaaaacaaaataaaattttttaaaggaaaaaaactaaatatagttgctcttagatcattagatgaatgtattcaatatgtgtcgttagcaaataaaatattaaaaaagatggcagatcggtccgatattctaaataatttaaatatagaatctgaaagtatagaaatactaaaaaaaatattgtttaattaatttaaagtgaaaaaaaacactattttgaaaatggaccaaagattaggatacaagtttctttctcctgatccaaaaatcggagtattttatagaccgttacattttcaatataaatcgtattcaaactttatcaattacagattacaagaaattttatcggttaaaagaactctattgtcgtttaaaaatgatactgaaaagattataatcgaaattgataatataaaagtgacgccaccagagtattcacctattatagctagcataaaaggaaagagttatgatgcattagtaacatttactgtgcacatttataaggaagtaatgacaaaagatggaactactataaccaaaattagtagttatgaaggtaacgattctcatttaattaaaataccattattaataggttatggaaataaaaacccattggatacagcaaaatatgttgttccaaatgttatcggtggtgtatttatcaataaacaatccgttgaaaaagtaggaataaatttagtagaaaaattaacaacatggccaaaatttagagttattaaaccaaatgcgtttactttttctttttcatcagtttcaccggcacatatactaccgactaagtataggcattataaaatactaatggacttatctcaattagataattgttatatttcatcgactaaaacattcataaccgttaatataattttattggttcaatatttatctagagtaagtttaagctttataaaacacagtttatcttatgacatgccttcagaaatttcgtatttggttaacacaataatagaaagtacaaaagaattgataaaaacgataaacgattttgacattgacacatacattaatgatttaat
| 64 | 92 | 0.7 | 0 | 180 |
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] |
30 | 150,317 | 183 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
tatatctttcattaattattttcttaatatcattttttatttttatcatattgggttcttcctcgcttaagtccaaaagtttatcttcataatgcccgtattcgccactagttttctctctgtgatttatatttctttcattggtttcatcatcatcgcctggaaagattgataaagctctgtccatttaaaacatagattttaaaaaaatacactctttactttttataccattttgtaatatacatggatttttaatatctgaatgagttgattgcgaaaatgtataatcgatacacgactctaaatttttaaactttcttatttctgatccattagatttaaacccaaacattgatacagaaacataatcattgtcaagtttaacacacctccacttttgtttaggatcataaatgtcatcgtttggatcttttatagttctatcaagagataaagtatttactgatttagaaaactcaaacgctgaatgagctgaattaaattcttttatgttgtcataatttagatatattgagtatagttgaaagataattatacaaacggctactgtggataaaataataaaaaaaattgttattgcgttcatttacacttctaaataattagcgatttttttaaatgcgtctgctagagctttcaaaaatgtatttatatctagttttgtcatatcaaacctatggtaactatttaatctagaattgcatccaaaaaagtttaccactgtcatagttagcaaatcatttacaaacagcattccagaaacaggattataagaagaacttgttgaattatctagaaccgatgtttctaacttatgcgaatgtacatctgaaactagtgatccctctaaaaagtctaatatttctttcatatgtgatttaaaatcgatccatggataatgttctacataaaatgttaatctacctaatggcgctgtaactataaacggtataatactttcaaagcttgtctttaacgtaggtttgatgttgtcgtattctttattaaatgtttcaatatttataaatgttaatccctctattattttttctgtaatttgaatgttcgaactaaacgctataatttcaataacttgtaaattttttatcctataatcttgaaaagtgtgtaaaagtgtttcatttaattcaataggtttatctatttttataaatttataattttctaaatctataatataatagtcaaaatctcccaatgtaataattctttttttctctgtttgggatttttttaaatatacacaaaaacctacttcttttcttaaaattttcgatgtgtaattataaaatatctttcttgtaggcatatgctctatagaagttaaccattcttcattgacggcagttgtattatttgataaaaccacacctgtagttaataacggccatctaactctattgttaaatccatgttttataaatgttgccaaatctggatttaaatcaataacgattaccttctcttctcggaacataacttaattgctgattttcacttttaaaatttttttttgactttttatttaatgataaaactctaagatttatctgagatattatttctttaactgttgatagagtggcagtgaaatcattacaatctgatttagttgataaatttgttattaaatgaataaaattagattcatctatatcttcttcactcatttaaaaacttataaagcacaaaaatacttattctgtattatcatcaatagatggtataaatattaatattaatagtttacaaatagtaccttttccatcaactatataacatttggataatattttaattgcttcatttaaaaagttattcatttagtattattaaatattatttacattatttttcatacgatgataatattttcgttaagtttttcttcatatgtgaaaattgttttaaaaggatacttggatcaactatatgtctaattacagattcatcagcagtatcataacatattctttgttcgccattgctaaaaacagaatctt
| 67 | 92 | 0.7 | 0 | 183 |
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] |
30 | 150,317 | 184 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ctgatttagttgataaatttgttattaaatgaataaaattagattcatctatatcttcttcactcatttaaaaacttataaagcacaaaaatacttattctgtattatcatcaatagatggtataaatattaatattaatagtttacaaatagtaccttttccatcaactatataacatttggataatattttaattgcttcatttaaaaagttattcatttagtattattaaatattatttacattatttttcatacgatgataatattttcgttaagtttttcttcatatgtgaaaattgttttaaaaggatacttggatcaactatatgtctaattacagattcatcagcagtatcataacatattctttgttcgccattgctaaaaacagaatcttctataattaatactcttctcttagaaacattaactgccctcatcaaacttactgattttaacaaatctttttttgacccagtaatcgacatagatctcaacatattttctatatcagaatctgacacgttacaacaacaaaaatgtgttatacttgttctaccattaattggaacatgtttatatgtctgacatagtaatattattgaagtattaagatgtcttccatgatttaaaaaatccaacaaacaacttgattttgtttgtttatcccctaaatcgtccaaaattaataaaaacatatctgcttttttatttccctttgtttcgacatatttttcaattttttcttttgttgtaattaatgcataatcaagttcttctggagtcgtcactctattgacatgatcaggccatatataactatcatatgcagaattgtaaacaggagtaaataaaaatatatgtttgtatttttcaactaatgtactaaataaagataaaagatatgcagttttccctgatccggatccgccaactaatgctatcctaaatggatttgttattaaactatttcttaaaaaatgtttttccttaaacctattcatcatatttataattactgttattagttaatttggtattattaataataaatgtagaaaaataagccacaaatgtcgagacaattaaaacttgtaactataaaaaaaatacgttacaaataaaagaactttaaaatatgttagttgatattccaaagagtggaactgaaacagattatgatgaaagtaataattttacagcattcgcaggttccactatatacggatatggtttaaaatcaaaaaaaaatataaaaaaaaaagtaaaattaattaatttctgtataaaaatatcaattatggcatcaatggtttcgttaattacaataacaattcttttagcattttttaataatacatgtgaattaaatcaatttaaggaacacaaaccgtactttttaaaaaatccaaatcctactacatatagtgacgacgatactgaatctgagttaaatgtttatagatcatgtaaaggtattgtttatagcggatactgttacacgtttaactcagaacctaaaagttttaatgatgcatacgatgattgtgaaaaaaaaaatagcgaattaccatcaaataatttaatgaatgattggataagtgactacttagatgggacgtggggggaagacggtaacgtactttttaaagaaaaaaatcaagaacttgaaactatagatataagcgacgagatgagaagctattactgtgtaagatcttttttttaaaaaaaaaaaaataaattattatattactataaatgaagtcattaaatagacaaaccataaataagattaaacgtgcttctgcacctactgctatttttatgctagtatcaactattgttagtggtataggcaccgcaatacgatacaaagatgaactatttcctaatgcatgtaataaaggatgggtaccatatgatgatagctgttacttagattcgaggcttcaactttcattatatggtggtgtaatgttatgcaataagtataatgcaaagatacctaatgttagtattagacatttaaaagtaatctcgtt
| 68 | 92 | 0.8 | 0 | 184 |
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] |
30 | 150,317 | 186 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
attaaatataaaaactagatatagcacaataacaaaaaatagagatctacatctagcgattataacatataccacaatttatccattaatatattataaaaatattgttttttcaaaggatagttcattatataacattttttccggatacaaatttgcactttttagaatttcaagcgacgatgataaagttttagaagatataataattttgaatgggaggtactattacagcaattcaatggaaaaggttaatataattaatataaagactctattggataagtacaatataaaaattaatagttttacacaaattgattatattcctaaaagctcacacaaggcatgtgtagaggcattagagttgtcattagatgatgtgacagtcagacaaatttacgatggtacttcttttaaagatgtatgctctatatctggtatcaaatataaaatagtaatttcgtattgtgttctttgttataattaatcttcttcttttttttaaaaaaatactgaacaaaaaagcttttttacatggttaaataatgggaatagtatctgttgtatacgtcgtagtaccattttcatttattgttttactttcatatatattttttgaatacaaaaatgttattaaaaaaatgttatttaaaaaaaaagggaaaaatcaaaaaagaacatgtgttagacttaattcaatcacttattcaacaaatagtataaaatccactatatcagaaagtacttggtcaaattgtagtaatgatacatttgtaaaaaatgaaaaagaaaatgtagagattgttgaaattaaacgttgtgataatgaattaattgaagaaagtaataataacgttttagaaaatggatgtaccacaaatacaggtgaagaaaatttaatttgggacgataacaacgtttatgatttaccacctaatgatagtgtttatgatttaccacctaacgatttgagttgtaacaacgattgtgtttatacattaccggatgacaatgtttcaaacatagaggaaaaaataactaagttaatacacaaaaataattccgagtcaaactattataattgttgttaaaaattttaacatgaaaaataaaatatttaggtcgattccgttttttgatattattaaaataaaaacgcaagttttagatttactttgtatgaacataacaaaatactataatgaagaacatgtaaacattatagtaaaagagatagaacaatatattaacgaaaaggtatttgtaaaaaatttaatatcgatacgatgttttaataaagaaggatgtgataaaaatagacaaaattttaatacatctttttctaaagcacttatatgtatcaaatcagcaaaaaaaggtggggtaatggttatttttaataaagctacaaaaaataaaaaagtagtatatcctagttctaatcatataatattgttaaatccattaagttattacaccatttctcaagtaaataggggttcggtaataatgatggtattggatattgatattccaagtatgagaataatgtataaaagcataaataatgtaaaatattctaatgtattagcgttactatgcccgttttttaaaaatgagtttgtttttgcactaaagcaattaattgatataaataataatcaggtcttatgtgaacaaatagttattaaccgggaatactatacagttatttcgacaaatttaaaaaaattctatataccatctatatgttttggaaaaaaaataatagattttaactatggatatgatgattttaatgaagacataataaataaaataataaacagtgatactccatttgattttatttcaccacagaaaagtattattgatgcgttgttagtttatgaaaaagttatatatggaaaaataaatgtttaatttttattctatagaaaaaagtaagttttcgtcttctattatatgaagttttctgtatttaatactagtatttaaagaaaagataaacaatgataataaactaataaattcaaaaataataa
| 70 | 92 | 0.8 | 0 | 186 |
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] |
30 | 150,317 | 187 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
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| 71 | 92 | 0.8 | 0 | 187 |
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] |
30 | 150,317 | 188 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
tagcgtaaattaagcaaaatattgtatactttatgtatacgttttaatattgaattaatatatagagtttataattatggaagaacttgaatgtatgtcgataaaaataacttccgaaaatgggagcaccatttccatatactgtgaatccaaaactaaaatatcattagatataacaacaaaaaaaaataacataaaacctattacaacaaaaaaatctattaaaaaaatagaaaaaaatgatgatgatgatttattcacagaccaagaaaatgcaatggaaatagatggggatcatgcaactgataataacaaactatagttagtttggtttttaaaataacaaatattgacaatcactgttttaatcatattaaatgattaggaaatattatgaatttaataaaactgtttcaaaagcggtctgtgttttgaaaggatataaacttcatggtgttattaattttgatcagttacaaaatggaatagtaattatatcaggcgttgtgctcggattaccggaaggtaatcatggattacatgtacacgagttcggtgatgaaactaatgggtttttgagtatggggaatcattataatcctgaaaataaaaaacatggtagcccttttaataatgagagacatattggagatctgggaaatatttattcaaacaaatatggaatatcttatatatatatattagatggtaaaatctctcttgttggagattattctattataggaagatcgttagttattagtgagaaaaatgatgatttaggcaaaggatataactttaaaagtttcatagatggaaactctggaaacggtgttgcatatggaattatcggaattgcataattattttctttttaaaaatatataaattataaaaatgacaaatacttccctccttttaagctactttttcttatttttgtacggaaacgtgtttgtcaaatctgactataactatttaatgtataagataaatgtttttaaaaacaatgaaagtactatcaagtgctatcataataatgatattatttttttatcagatgattgcgtaagctttaactctacatataatacaactgttttaaacaatgatgatgttaaaactgaacttgttacattgtgtgatgtatctaaagaagtacaaatattctctctcgacaattcttatactggtctatttttaacttttttatgcaataataacgatagttattggtttgttgatattttagaaaatggaataggtaacaatgttcctacatgtatcgatggagaagttaataataaaaaagttaaaagtgaattacagggctctttagataaggaaaaagtgttgttgtccaccttttgtaaagtttcgcatggagattgtagaatgtggtttaaaaaacatatattttataaataaaacaaaaaatatacttatacttttaaaatatgaacatgtgcacatttaaaaaatttaggtcgttgtgtaaaagcattgcgttaacgccaaaatatttagaaaaaacaaaacttataaacaatttcataagttcacttgatgtagataataagtacttagtaataaaaatgttattgccaatggtcaacaaacgggtttattatttaaacgatttacaaatcattaaaatttttagtaaaatatttaaacatgattataagaccatgttagaagatttagaaaatggatatgtatctaatacaataaaaaagttttttaaaatcagcaatactaatatcgttcctatacaaaaaagtattttattacttaacgatgttgacatgtttttaaatcatttaactacattaacaaaggaaaaagataaacaaatgtttttaacaatgatatccagtatatgtaccgccgacgatttaaaatgttttattttatttatcaaaaatgatttgcaaataaaagcaggtgtaaaatgtgtactagatgcattagataaacatgcatataatcattttaaaaattctatagatttaaaaaaaatagtatttggtatatctttgaataag
| 72 | 92 | 0.8 | 0 | 188 |
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] |
30 | 150,317 | 189 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
cattaaaatttttagtaaaatatttaaacatgattataagaccatgttagaagatttagaaaatggatatgtatctaatacaataaaaaagttttttaaaatcagcaatactaatatcgttcctatacaaaaaagtattttattacttaacgatgttgacatgtttttaaatcatttaactacattaacaaaggaaaaagataaacaaatgtttttaacaatgatatccagtatatgtaccgccgacgatttaaaatgttttattttatttatcaaaaatgatttgcaaataaaagcaggtgtaaaatgtgtactagatgcattagataaacatgcatataatcattttaaaaattctatagatttaaaaaaaatagtatttggtatatctttgaataagttgaacgatgataatatggtactttttactcctgtaaaacctatgctagcagatgtgtgtaaatctagctattatgcatttaaaaagtataaagatggaatctgtgcagaaataaagtacgatggcgaacgaattcaaattcataaagacaataatttatataaatattttagtagaaatctaaaaccagttttatttcataaaatagagggatttgatgagtttctaaccagtgcgttcccttcggctaataactttattttagatgctgaattaatattaattgatttgaatactaacaaatttgtaccgtttggttcattaggtataaataaaaaaaatttgtttaaaaactctagcacttgtttatttgtctttgattgtttattttacaataatgtaagtttaataagtttaccatttgttaataggagaaaaattattgttgataatatcaatgaaataaaaaataaggttatggtgtcagaagcattttatgtgtataaagaagatgatttaaataaaataatggatgacgttattaaaaaaaaattagaagggttgatattaaaaggaataaatatcgattatgtacctggaaaaagaggttggttaaagatgaagaaggattacttagatgatggatccatggcagattctgcagacttagtagttttaggatcatattacggtaaagggtctaagggtggcgcgccatcaatatttttaatggggtgctatgataatgaaagtaataattggaaaacggtaactaaatgctccggccacgacgatgacacattaaaaaaagtacaaaaagaaatagagtttttaaaaattagtaaagatacaaaaaaaatcccaaaatggttaatagtagataaaatatattatccagattttgtagtttgtgatccaaaaaaatcacaggtgtgggaaatatcgggatctagttttacaaaatcgatacatcacacagcagatgggatttcgataagatttcctagatttaaaaaaattagatatgataaaaattggttatcggctacaagtttgaacgaacttaagaatttatacaaagaatcgtaaaatgtgttgtttttaaaaaaagaaaaaaaaaggcattattttttcttttttttttctttttttttaaaaatataaatttaatacaaagaaataaattgctccaaagaaagcaatacacacaatctatctgttgtttttgataaggcattgtaatatgggaaaagttttactgaattcattattcactatgttgatcatattaatttacaacacatattgtgagaaattagtttgttatagaaaactcggattatacaatttttacaataaggatatgagatcacattcatcgtttgaattgaataccaaacgtcaagactttgatgttttgaggaaagcaaatgctatggcacttgaacaaaaaattaattggacaatgttaaaagaagaagtagatgatctttttaaaaaaaattgtactgattctgataatacaatttataacggcatattgtctgaatccataacttttgaaataaatcatggattttttaatgtggatactgaagtcagtatatcaaaatcattattatatatggatttaggagtagaaaattat
| 73 | 92 | 0.8 | 0 | 189 |
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] |
30 | 150,317 | 190 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
aaaagttttactgaattcattattcactatgttgatcatattaatttacaacacatattgtgagaaattagtttgttatagaaaactcggattatacaatttttacaataaggatatgagatcacattcatcgtttgaattgaataccaaacgtcaagactttgatgttttgaggaaagcaaatgctatggcacttgaacaaaaaattaattggacaatgttaaaagaagaagtagatgatctttttaaaaaaaattgtactgattctgataatacaatttataacggcatattgtctgaatccataacttttgaaataaatcatggattttttaatgtggatactgaagtcagtatatcaaaatcattattatatatggatttaggagtagaaaattatactgatgtattagaaagttacaacattacaatatcaaacatgacaacgatggccacaccgacacccgctacagtaatgacaacaccgttatatttagaaaataaaaataacaccaatgatattaaagtaaagctttacatggttaattcaagtattattctaacatttgaaaatataacaattgttataaataatacatgtattggtacatccataaacagtatttatgcaaaaataacaagtgagtttataactgttaatgtcacaacagatccgttgtctacaacacctccatttttaactaagtctatgtttgataattgtaccttaacacttcctgttactatttctcaagaaggatattatacaaaagaatataatgaatatactggtacgactgaaccatttactacatatagttattattcagatgataatatgaccgaatcatttactactgcatttagttattattcggatgataccaccacgactgaaccattcactacatctaattatttaaatgataccacatcggaaccatcatttactacatcgagatactatttaaacaatggtacatctaattataagaatatttcatatgtatacaataacaaaacaggtatcgtatttgtaaaacaacaaaataacatttttaaaaatataacaatacaaacagagtttaaaaatttatgtaacgaatcaagtttagaaacaaaggtatatgctgtaggggttccggaaaagtttaatacaattttaaagaatattagtgttgaaaaatctaatgacagtgattcatattttatttgtaaaatgattgacgatggagggaattgcggaattgatatcttcatggatgctgcaactaataatattaatgatgaactggatagttctaaaaaaggaagtagtaccagacacgctagatctgttgatcatatggagttagatccattctgtttgcatatgtatcatggcattgacgaaaccatagattgttcactaaagaaaaacaataaagatatgagtagtcgcacaaacagaatcaggagatctcctcctgataaaggtaaaaaaccacaagtaccggcaaaaggaaatttacaactaatgagcgctgaggaaatgggcgctcgaccaaaaataagaaaacaaacgcaagatatacaaattggtgctagaggggtcgatggcccagtttctggatcagaagaaatatattctcaagttaggaaagaactatctcagaagttaaaatctttagttttggacgataatggaaaattgacaacgacaagattgcctaaatcgacaaaagctttaattggtgggttggtagattctaagatagagacatctagtgctgcgtctgatataacaagacaaatagtccatcaacaatcaggagatatttattcgttgcctgtaaagaataaagtattcggtgtagaatcaaatagaaagatcacatctccaattatagacgtcgatacatcatctaatatatacgcaaacgttttacaaaaaagagattttaaagttacgtctccaaaaaatgttgatgtatatgaaaaaactagaactgattctttttcagacgattcgtattttttgaaaagatcattttcttctagttccgacg
| 74 | 92 | 0.8 | 0 | 190 |
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] |
30 | 150,317 | 191 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
tctcagaagttaaaatctttagttttggacgataatggaaaattgacaacgacaagattgcctaaatcgacaaaagctttaattggtgggttggtagattctaagatagagacatctagtgctgcgtctgatataacaagacaaatagtccatcaacaatcaggagatatttattcgttgcctgtaaagaataaagtattcggtgtagaatcaaatagaaagatcacatctccaattatagacgtcgatacatcatctaatatatacgcaaacgttttacaaaaaagagattttaaagttacgtctccaaaaaatgttgatgtatatgaaaaaactagaactgattctttttcagacgattcgtattttttgaaaagatcattttcttctagttccgacgatacttactttttaaaagaaacagatgatagcgatagtgacatttttaggagatcttcaaaaaaggatcaaacttattcactagcaggaaaaccattaaaaaaacaatcacttagaaggtattcatctagtgattatgaaacaataggagaaaatatatatgaatctattcgtgaaccagaatatgcactgctttcaaaaccaagagttttaaatccacgaagtcatatacccctaccatcagtacctaaggatgacataccattcactcaacaaaaaagaaaggtgattgacatgatttgtgactcaaggtctgcatcctctatatgtaatgcaagagggttggattcagcaaattatagaggtgatggtaacatatatgaaacaactgacgacgattttgtaaaacgtgaaaattctttatatgcaagatcaaaactagaaccagaattaaaggataatccactgtatgaatcatcgtctgatagcggcattgtatcaaatccatataacaatcctaaattgtcgagaagaaatgctattaaaaagaaagtattaaacgatggttatgaggaattcgttataaggaccgacgaagagcctagtgaaaaacctaatatggcagcaaatacgtataataacaatgataaagctaataataaagataaaaataaaggattttcttacttaaataatgatatacaaaaagatgaaaaaaatgttaataaaattaaaaaatcaaaaaaaggaagaactaaacgtttaactgaattatccactgataataaaatgaataatatgataaaaacaattgctatttccagttatttatcatcaacgaatagtaggatatcgtccataatggcacaggctaatcaccaaccaaaagaattgacaattgttaacattgtaacgtccgtattatcgcaaatcggtggaactttagcaatggctggctctgggtctcccaaagctgcagctgcaggtttagttattcaaggaatatctggattaatagatgcggcgacatcaatttattttcttctttctggtcaagaacaacctaaagatccagctattgaaaagttttccaactacgcatcttacgtttcaagaacagatgcaggagcaagggtttgtatgatgccagattcagatattacaataacgttagcatatagacatagtaacatgaatgtagaagctgaaaaaactagaggtgagtacacagatataattccaagtaccgtatactacttaaaaaacagtcaaataagttatacggtgaaagtaacattggtgtgtccaatcggtcagttgaggcttttggaagcagatataaatacatatgctacacttactcgggaagataaagatggtgtaaaattctatcatgtgtttgggattttagaacttctatcatatcatcctaatgttacatttacttgtggaaatgaaccaggtgtaatcttcatcccgtttgagcaaaaactaagcgacatgcaattattaaggatatcaactcctggcgaacctagagaagccgaagcaatgagttctgatgtttgtgatatttatcctcttaagaagttttatgtattagctggaaattgcccttttgatatgagcagaaaatcagtagcatatgt
| 75 | 92 | 0.8 | 0 | 191 |
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] |
30 | 150,317 | 194 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
gaccaatccattgtgcgtctctctagatatagaaataaaaattgttataagttaaacggtttaaaaggcaggaatatcgtgattgagtgtggggttcgtcacgtagaatatgatacagttgagtggtataaacaaaataaaacatcaataataaaacttaataacgatagtaaaagaagaattattattcgtaatatcactaagggtgattctggaaaatattattgtaaagggcattatagtaaactaaatatttcatatacaattagtaggtgtacgtatctatcagtgttttcactaagtcattacgaatatgaattagtttatatgccaactattattaacgtaacaataggagaaccaatgactgtaaactgtagcgttcgtacaaaggcaaacgcatatgaatatattggcgcgatgtggttagatgataaaaaattatatgtaggtatggaagaaaatttataccaagacggaagtcgtaaaattgaaggagatgatatcattaaaacttcacatttggtatttgttaatgttatggaaaaagatattggaagaacatttacatgtgaagtaggatcacgttttaaaggcgaatatagaacggttactttaaacttaaaaagttaaaaaaaaataaaattttaagttaagttataattaaaaagccagacagtatggacaataacattgttgacgttgatgaatatcgtatgtgttttatatacgataaggttgattatataaatatagacgatcccattaaaaatgtaatagaagagtactttttatggagggggttagttggtagaataggaagaaaaccatcaaagataggaaaattatttgtagattttattaacttagatttaacagcaaaaaaaatgttaggagacttggattcattatttactgatattttaaagttagatgatattaatggtgcaaacgaaagactttctaactttgtgaagtttgtcaatattaattttaataataaacctttagtgttattaggattgctgggggcagtttctgaattttgggggaaaaaaaagattagtgttaatggtataatgtcagtgttcttaagcaatgtatcaaatgatacattgcttgagatatgtaatcacatatagtagtttttttatgtatttttatgttaaaaaataaaaatgaaaatgtacttttgaataatatttaaatggatattatacttggtaatacattttctaacaatgattgggatatttcagaattctttaaaaatgtatttgaaaataatgtattcgaaaatccaaaaaatatatgctctgtttttgatagtataattattggaaataagacaaaaagtaaaattattgtggcagatacacacaaaatagatttatctatctctaacacatacaaagaaaaaaaaaaggtagatttaattagagtatctagattttgtaaagccgtggctcttaaaagtaaaaaagactatgtttacattcctgaaacaaaaatttcatttgccgtacttactgtttctacaatagacgatgatttaaaacatgaactaagttgttgctcgttgcaaaacaaacaatatgatttgtcgatgaatatgaattcgtttgctatcgttactaaatgtaatggtctatcaataaaaggcactaatatgttaatagtcataacattttttgaagagaaaaactatccacatattccattgatacgtactatatctagtaatgatgtgtttatatctagacatagtaggttgcataaggaaatacctaataaagattggtttaaattttacgtagagtttaatcataattattgtacgtcattgacggttataatagatggaagcatcttatattctagatcagattataaaactcattgtataattagtaagtatcaatcaaaaaaagacgaaatcaacgatgattgttgctgttgttataacacaccatctgtttatatacttaataaaaaagaaattattgagtacgtgtcctgtaatacaataagaggaggaattcatattt
| 78 | 92 | 0.9 | 0 | 194 |
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] |
30 | 150,317 | 195 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
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| 79 | 92 | 0.9 | 0 | 195 |
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] |
30 | 150,317 | 196 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ggctatacgcatagtgatattaaagcatctaatatagcaattgatatcaataataaaaataaaatttatttattggattatggattatcttatagattcatgataaacggcaaccatgtggagtataagcgagatcccaaaaagatgcataatggaacaatagaatacacaagtatagatatgcataaaggtgtatccccgtctaggcgaggagatttggaaattttaggatattgtataataaaatggttaggtggtaaattgccatgggaaaatgatttaaaaaattgtaaatatgtaatggagtcaaagattaaatacatgaacgatattggaaatttaatgactgactcgctaggatctaattatcctgaaaaaattttaaagtattttaattatataaaaacattacaatacgattctattccagattatgaaaaaataatgtcattttttcttctttaaaaaacataaaaaaaaatttttttttattgacatggattctgatagtcgcaacggttttattttgctaaattatgaaaaagtcaaagttattattgtgttagcaaataattatgttaacataacaaaactttgtaaacctatgggtaaatcattccacaattggtggaatttaaaaagtagttatcaaattatatgcaacatagcaaaagaagaagatatagaagttgaaaatctttcatttaatgtttggaaaggacaagaaactaaagaggtttatggaaaatatattcatcctaagttgttggtatatattttaaactggatttcagaagagtattgtgccaaaattctatcaataattaatgaatttaattcaaaaatattaaataatattacaaccaataccaaaattaacaaaatttatatgcgtctaccgaaagaagagtctatgtttaatgcaatatttaataaagaaaatagcaaatttaaaaattacaaaaaatttctaataaacattccaacgatattatcaaaatacgaaaaatattttttggaatctgaagaaaaagagtgcgcagtttgtttagaaaaagtatatgataaggaatatgatagcatgtactttggaatattacctaattgtgatcatgtcttttgtatagaatgtattaatatttggaaaaaggaaaacagtacatgtccagtatgtaggaatgaattcctatttgttataaaaagtagattttttccataaaaaatctattaattacaaacatgaggaaaatatttattattataaatcatgaaaaatatacatatgttattgattttattatgtaataaagtatattcgttatgtgatttaaataaatgttgttatcctccatcgataaaaaatggatacatatataatgaaaaaactgaatataatattggatcaaatgtaacatttttttgtggaaataacacgcgaggtgttagctatactttagtaggagaaaaaaatattatttgtgaaaaagatggtaaatggaataaagaattccctgtttgtaaaattataagatgtcgattcccagctttacaaaatggatttgtaaatggaatacctgatagtagaaaattttattatgaatctgaggtaagtttttcatgtaaaccgggttttgttttaataggaacaaaatattcagtttgtggtataaattcgtcatggatacctaaagtacccatttgttcaagagacaatattacatataataaaatttatatcaataaagtaaatatagatgataacttttttaaccaaataaataacagtacttattactttgataaaatattacaaataaataatgttaacagatacactttaattttttttgttgttgtatcaattaaaatattatttggttttgtatttatattcttttcgtgtaataaaaaacctttagatagtataaaatattataaataaaatgggaaataaaaaaaatgatgatattaaacatattattaaagaatatattagatggagaggaaacggtgaagatatatgcgaagaacgtgaactaaatattttt
| 80 | 92 | 0.9 | 0 | 196 |
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] |
30 | 150,317 | 197 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
aaatattcagtttgtggtataaattcgtcatggatacctaaagtacccatttgttcaagagacaatattacatataataaaatttatatcaataaagtaaatatagatgataacttttttaaccaaataaataacagtacttattactttgataaaatattacaaataaataatgttaacagatacactttaattttttttgttgttgtatcaattaaaatattatttggttttgtatttatattcttttcgtgtaataaaaaacctttagatagtataaaatattataaataaaatgggaaataaaaaaaatgatgatattaaacatattattaaagaatatattagatggagaggaaacggtgaagatatatgcgaagaacgtgaactaaatattttttttaagaaactcaaaaaaatggactcgtttgtaaaaaaaaatattaaagaaagtaataatgatgaatatgatataatcaaatctatgaagttgtcgttggatgatggtccaaggatggataagcttccagaatatttgttggatgggttgaatgcagaagaaatactaggtctatgtggtataatatctgaaaaggttgttagtgcaacatatgaagtaaattgggatcgtgtttatgaatcgttatttaacatattagatgaaaaagatttaaactacattaaaagtaaaataatgtaaaacataaaataaataacttttaaaagtgattatatcatggacgaaagaaactcattttggagtttagtaaaaaaaataactacagaaaattcacaaaatataataaaccaaagctatattaatccaataagatgtataaaatcagatgatatttatcaatcttatacaagtgtcgttataaaagaaaatgatcaaaattacattcataaaggtatttttaataataaagaagttatcgttagaactttcaaaaaatcgcacacaagtcacaaaatactaatggatatttcaaataacgaaataaaaaatttaagaaggatagacagtaataatatattaaaaatttacgcattttatatagaaatgtgtgacggtcttccaaggctttcgttgatattagaatattgtaaaagaggatatttaaaaaatgtaataaaaaaagaaagagatttaacttttaaaacaaaattagatatggcaatagattgcagtgttggtttatataacgtttataaatacacaaataataaaccatatggatgtatttcaagcgttagttttttagtagaggaaaattataaagtaaagattatatgtcatggtttagaaaaaatactagccaaaccaccttttaaaaatataaacgctatagtttatcaatctcataaaatgttatcaaatgtgtttaatgaacgcactatggatgatgatatgtatagttttggcgttgttttgtgggaaatattttctggaaaaataccatttaaaaatctaacaacgaaagaaatatatgatttaatcattaataaaaatggacagttaaaacttcctgaaacgccgcatttaattaaatatacagtagaaaaatgtacttcacataccagtaagagaccaaatataaaagaaattttgtacaatttttcattgtataaattttacaactaaaaaatcgtctgttttttattttttttaaaaaatcttttaataaaaatgaaactaatttaataaaagaatttaaaaataataactcataactaagaggcgatataaatatacaaactatatatttttattttttaataaaacaaaaatatatagtttgagttttaaaaatatgtattcattttacgaattacgtaaatactgcgatgtatcaatatgttttaatgatgtgattaaaattaaaggtcataaaataattttatcaaattcatctaaatactttgataccatgtttagtaataaatattttatagaaaaccaaaaaaatgacataagtattaatatatcaaatttagataatccagaggtatcaataaatgagataattaaatttatgtataacggg
| 81 | 92 | 0.9 | 0 | 197 |
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] |
30 | 150,317 | 198 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
atcgtctgttttttattttttttaaaaaatcttttaataaaaatgaaactaatttaataaaagaatttaaaaataataactcataactaagaggcgatataaatatacaaactatatatttttattttttaataaaacaaaaatatatagtttgagttttaaaaatatgtattcattttacgaattacgtaaatactgcgatgtatcaatatgttttaatgatgtgattaaaattaaaggtcataaaataattttatcaaattcatctaaatactttgataccatgtttagtaataaatattttatagaaaaccaaaaaaatgacataagtattaatatatcaaatttagataatccagaggtatcaataaatgagataattaaatttatgtataacgggaaattagataaaactcttaaagattatgtaatcttaaaagatatgcttaaaatagcagattatcttattatagatgatattatcccactttgtataacatctatagttaaaattatagattttaataattgtctcgatgcgtgtattttttcagaattttataacttaaaaaaactaaataggtttacttataaatttatacgaaaaaatatacgtaaaatatatttaaaaaaagattttatttatttatcatttaacgttattaatcttcttttacgagataaaaaaactgtattttataatgaagatgatgtattatgtattatattacaatggcttaataatgaagaaaataataaatattttcatgatgttttaaaagtaataagattttcacttttgtcagaagaatgtgccaacaagcttaagataaaatataaatacttatttcctgatagtttattaagtaagtcattattttcctcaaaaatgtcacgcagagaatcaacgtttggatcgtttatatatatatccgacccaaattggtatagtaaaaaatatgatattatgtacataagaacatttaattatattacaaaaagagttaaaacaatagatagtataccgtttgttgaaaagtttcattctgtattacataatgacgttatttactttttaagatttgaaggtagtaataataaaaataaatttgataggaattttaacagttatgatattgtaactaaatcatggaacagttttccaaaaatagacgattgtgaaaatttttcatcctgtgtattaaataataaaatgtacctaattggtggtgaaattaatggtatttcaacaaatagggtattgtggtgggattttaaatctaattattggaaccaaacaactcctatgcgttttccaaaatctgaatcatgtgtggtaccggctgaaaattttatatttgtaataggtggaaaagatatgtactcattagatgtagttgaaaggtttgatacaaaaacacaatcttggtcaactttaatgcatttacctatacgattaaaaagaagttctggtatatatcataaaggatttatttatatagtagggggtatcagttacgctagtgctgagctcggaataggctatgaaggttttgttaataaaatatatagatatgatatatcaaataactattggattgaattaaacccattaagacatacaaaaataaatgttaatctgggtatattagataatgacaataaaatatatgcaattggaggcgataaaaataatacaatagaagtgtataatatatcaacaaatacatggagtatgtttggtagatcgttttgtaatttaattaactcaaagcaatgtaatatatttacaaaaagtgtttttttttgtaaaaacataaataaaagggtttaagtttatgagcaaaatcattaaaaatgattttgttatacgattacattacgcttacaaaatctagaaatatcaaagttaaaaatataataaaacttataaaaaatgatcagctaattgattttaactataaattatttacgttgtgtgaatatgtgagcaaaaaacatattcgtatagatgttttaaaaatattgtttgaaataggttgtaaaga
| 82 | 92 | 0.9 | 0 | 198 |
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] |
30 | 150,317 | 199 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ttagataatgacaataaaatatatgcaattggaggcgataaaaataatacaatagaagtgtataatatatcaacaaatacatggagtatgtttggtagatcgttttgtaatttaattaactcaaagcaatgtaatatatttacaaaaagtgtttttttttgtaaaaacataaataaaagggtttaagtttatgagcaaaatcattaaaaatgattttgttatacgattacattacgcttacaaaatctagaaatatcaaagttaaaaatataataaaacttataaaaaatgatcagctaattgattttaactataaattatttacgttgtgtgaatatgtgagcaaaaaacatattcgtatagatgttttaaaaatattgtttgaaataggttgtaaagaaaatttacataggttatcatattatactcttttaagtttctttaaaaactataaaattaagtataattttaatcatgttaaaagtattatagaattaataactagttatggcgtatcgtttaatgatgaaccaatcaaaaaagattcgtatcccattttatttttagtaagtaatgaaaaatttaatcatattagcctttatgaatatttagaaaataataatataaatttcaatatagtaagatctgatggttataacttgttgcatttatacttagaatcctgtaataatataaaactaagtgtattaaaactactcatcaaaaataatgtaaacgttaacggattaactagatttagaaacctaacaccgttacatatatatttgtgtaaaggttattgcttaaactatagtgtaataaattttttaatagacactggatctgaaataaattgcggcaaggaaactttattatattcattctttactacttgtgataatgaaaaagtattcaaatcactaactactaaacttattaaaaaaggagctgatataaatcaaaaatcagaaagtggattaacgccattaatgggatttgttgcatattcagatttagctactcctaataatataaaattcatactaagttgtgggggaaaccaattagttgtacatcctcaaagtaatgaaactttgttacatatttacttacgtaggtatgatgtatcattgtcaacaatatcaacgttgttagaaagtggcattaatataaattctgtcaattttaaaaattatactcctttacacgtatatgttgataaaaatatagaacatttatctttagatgtcgtggattatttaatctataaaggtgctactaccgaaagagttaacaggtatgattgttttgcaaaaactatattagaagtatttttagaaaaaaacaagtttttaaacaattcttcaagatattttattaactatattttaaagtattttccaataaatgaaaaagatctatatggatttaccccacttttatcttctgtatatgtaaataatgtaaacttttttaattattttttgagattaggatctagtataaatgtaatttctgaaataggtgaaacatgtgttagtattccaattgaaaatcagtataagcgttttttaaaaatagttttagatagtaaaccaaatataaaaacaataaaagctactcttagatatcttagcgataaggagtttaatacaagaacaaagtttaaattgatgaaacattgtattaaatatttattcactttggatcctgacgaatataaaaatcataggtttatttcttcaaagttcaaaagtgtcgtcaatgaatgtcaaaaagatattataactatgaaaagtacatttttaaagactgtatctgtttacgatttaatatttaacaaaaatggaacaatgcataaaaggtatttaaataccatggaagtaagaaaatacttaaaatcaaatatttatgctgaaagagttagatgtgtaataaataattcaatagaaaaagataaaaaaattgattccataatcaaaaaagttaatatattatgtaaacatactatttgggacatattacctgaagaaataaaagacaatatc
| 83 | 92 | 0.9 | 0 | 199 |
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] |
30 | 150,317 | 200 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
taatacaagaacaaagtttaaattgatgaaacattgtattaaatatttattcactttggatcctgacgaatataaaaatcataggtttatttcttcaaagttcaaaagtgtcgtcaatgaatgtcaaaaagatattataactatgaaaagtacatttttaaagactgtatctgtttacgatttaatatttaacaaaaatggaacaatgcataaaaggtatttaaataccatggaagtaagaaaatacttaaaatcaaatatttatgctgaaagagttagatgtgtaataaataattcaatagaaaaagataaaaaaattgattccataatcaaaaaagttaatatattatgtaaacatactatttgggacatattacctgaagaaataaaagacaatatctttaactgtatgtcgttgagggatattagagtaatctttcatatgtttgttgtgtataagccataagtcttactaatatttttttttgttttatgaatataaccatagtgttaagtggtatctttttatgttttaaataattaattatcttataaaatataatttaaaaaaaagtttaagataaaaatataattatgaaagattgtcacgaagatacaaaattggtaattgttgaaactataccatgtgatcttgacttattgtataatgtttcaacatatgatttttggatgaaacttatatcagaaacaaaggaaagtttgtatatagcatcgttttattggagcttatgtgatgaagatagtaaaaaagatgaaacttcaaataacggaaaaatggtattaaaagaactaatcaagttaacatctagagcatctttaaaaatagtagttaataaatctaatcaaccttctgaagatttattattattatctagttatggtgcacaggttatctacgtagatataaaaaatatttttggtggtgttttacatacaaaatttttaatttcggatgagttgcacgcatatattggaagcgctaatatggattggaggtctctttctcaagttaaagaacttggtataggtatctacaattcttcatgtttggtaatggatttaataaaaatctttaatgaatattgttatattgggtatactaacgtgccttgtttttggtcaagtgaatatcaactatgttataatatcgataatccattaagtttaataaatagcaattataaaatgtttatagcatcttcgccgccatcgttaagtaaaaacaatggtaccgacgatttatattcgttattatctgccataaaaaacgcagaaaaatttatttatatttctgtaatgaattatattccagtaatatatcaaaataataaaacactattctggcctgatatagatatagaattacgaagagttgctatagataaaaaaataaatataaagctattggttagtttttgggatcatacacctttaataatgaaaggatttttaaaatcactaaaagatataaactataaaaatattaatatagaggtaagatttttcataataccaaaaaatcaattaaatataccgtacactagagtaaaccatacaaaatacatggttactgataaagttgcatatgtgggcacgtcaaattggtcaggtaattattttactgatacctgtggagtttcattaaatataattgattttaatgaattagcgataaggtcaaagttagaaaatatctttataagagattggtattccgtatattcatttcctatttcatatgttaccacaccaaaagataataatgaaaaagtacctataaaacaagatagagattttttagattataagctataaaaaggtgtattttattgaaaatacatgttattattttgatcatcttctcaccaaaaaaaaaaaaatgtcactgttatatgaatacgtcttacattctccaacagtagataaagatgcagtagaattattaattagaacgggatttgatgtaaatgaagaaaattgtgacaatgaatcaatattattactatatttaaaaaggaaagatgtga
| 84 | 92 | 0.9 | 0 | 200 |
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] |
30 | 150,317 | 204 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
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] |
30 | 150,317 | 205 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ccatcggtcgatattgtaaaattattaattattttaggtggtaatgttaatggattagaaaatgaatactcaacacctttatgtacaattttatcaaatataaaaaaatataaacatatgttagatgttgttaaaatattaatcgaaaacaatgcagatgttaacaaaaaaaattccgatggagagacacctttatattgtttactatcaaatggatatataaaaaataataaagaaattttgttatatatgatacaaatgggtgccgaaacaacattgctatctaaagatggatatacaatgcttcaagtatatgttaaaacaaatcatcatatcattgacatagaaattataaaaatattgttagaaagtggtattgatataaatacaataagtaataaagaaaagtatgatacattagattgctatttcaagtataatatcgataggatagatgcaaatattttgaaattatttgttgataatggatttataataaaaaaagaggataaatctcataaaaaaaaactcatggaatacttaaactcgttattatacgataatcgaagagttaaaaaaaatatactcgattttatatttacatatattaacgttaatcaagtagatgaattaggatttaacccactatactattcagtttctcataataataggacgatatttgaatatattatccaattgggtggtaatattaattgtatatcggagttaggcgacactttattatttaaagcatttgagaatcggagtcttttcatatttaattcaatacttgaaaaaaaaccaaacaaaaaaacaatttcttatacatattataaactaagaaaacatcttttagatgtaggcgattttattaatcaaatagagtttgatattattaaaaagtttatagcgcacgtaattttgtatgtaaaaaatttcagcgttcgaaatcgaacaaaagcatttatttattttgatgattttatagaaaaatgtacaaaatcttctaattacattcataatacgtacataaataatgaaacaatttttcaactttgttttaataaaaaatatataccaataagtgtgataagtaataacgaaaaactgttaaaaaaacatacaaaattattttactatggaaatattttaaagaaaaacatagaaaagtctaaaaaatattatgaaaatatttacaaggtatcgtgttgcatttctaatttatgtgatacatgtagttattggaatacaataccgttagaaataaaatttaaaatagtaaataatttatcacttaatgacatagaaatgtttttgaaaaataataaaaaatagaaaaaaatatttttattttttatatttaaatacaaacaacaactatgatttcatatattttaagccctttactaagtgttttttattttgttataggtaaagtaactaatcttgttacatttttatttttgaagtttttttgggcaatgatagggttaatgaatccttataacatgattacctcatcgacaaaaaatctgttttcgtttaatataaacccctttaggcaaaagaaaaaaagtttcagttttctatcatatataaatccttttaagaaagaggaaaaaaagaaaggtttgttttcaagtttttttagttaataatagaaaaaaaagttcagtagtatcgaggtggtttgtgtcgtcaatacgtcaaaacaaccaaccaatatgtcatcattaactttgttcattttctttttgcaactattcatttttactagtagtgtaagcggaatatcaataaagagatgcacagaagaagaaaataacacatgggaaatcgaagtaggattatgtatccaaacagagaattttagagcgattaaaactggctgttataaaattcaaggacctggaggacttctaacagagggaaatggatttaaaattttcgcacatgatgattgttccaaagaagaaacacaaaacaactttatattagatagtgttaacgaagcagtttatgcattgggtaaatatgtatatatg
| 89 | 92 | 1 | 0 | 205 |
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] |
30 | 150,317 | 206 |
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ttttagttaataatagaaaaaaaagttcagtagtatcgaggtggtttgtgtcgtcaatacgtcaaaacaaccaaccaatatgtcatcattaactttgttcattttctttttgcaactattcatttttactagtagtgtaagcggaatatcaataaagagatgcacagaagaagaaaataacacatgggaaatcgaagtaggattatgtatccaaacagagaattttagagcgattaaaactggctgttataaaattcaaggacctggaggacttctaacagagggaaatggatttaaaattttcgcacatgatgattgttccaaagaagaaacacaaaacaactttatattagatagtgttaacgaagcagtttatgcattgggtaaatatgtatatatggaaatatcaaccagtaatataacaactctgtattcgctgccacagtgtgctaagagaatatcattgtcaatttcttgtgatcaagtaactacagaaatgaaatcatacgttgagagtgtaagttttaaagattatgatttagaatttgttataacaacagatattagttgtgtaaaacatgtaagttcaagtgttatagttagaaatgaatgtgaaaaaaaatatatatctacaggaaaaaagatttttgggtttaataataaaatagattgctcagctgtaaaatttagtgaacatgtaaattatttaaaaacgtgcagtgttgggaaatttgatagaaaaaaatattatgaacatcagcataattatattaaaaaaatatttcatcataatgaactataggattgttatacaaaagacgatataatatttattttgttctttttcacatatataaattatgaataagaaacaggagttttccgtttttttttagtctggtggatttttgcattaattcataaaataatctttagtatatggagatgtgtaagagggacattagttcttatactaaagattttaggatttgtgatatatgcaataaaaggattttgtcaactactcattaatagcttagctaaagtttgtatgttgtgtattttttatatagctagattatgtaatttaattatatatagtttgtattcattattaatgtttccaatgcaaaagcttatctccttcatgtttggaaacctaaatccgttcgattctgtcttggataaggatgaaaaaatccaagacaatataaacactaatcacaaacctatagaaagtaaagaaataaataatgatctaccattaactgtattagataaaaaagatacaagcgatataaatattagaaatgataatggagtttttgattttattaaaattcctaatccatttaaaaaacactacgaatactactgtaatcaaaacacaataaaggaaccacctagaaaaggattagttgaaaggatgatgaatatggttgaataattttgaaaaataagcacaggaaataacaagttcgggttaaaagagacttttttcccgttcattttacaagatgtcttccggcaactatgtctaccgaaacaacttttcagatgatgatgatatcacaaccgccatctctgattatttgttttggtcatcactggcattttcctccagggaggttgctggaaaggtgttcttagtttttgaatctttcaaaaaggatgcctcacttgtatttggaaatgatctaacagcttttgtcaaaaacatgtttttggattctaaaattggatttgaacaatcaaaaattatgattaattccatgttaaaaaaagaaaattacattagggaatcatgtgcagtgattggcattttagcaagagcagcagaatattggggtggtgaatcatctccaacttgttcttctgtgaaagtgttggtattgcttcgagacctcgtttctgacaacgatatttcgctagtgaaatcagcactaataattagacttaaaagattgaatgaaaaaagtatccatttacaggtttaa
| 90 | 92 | 1 | 0 | 206 |
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32 | 8,103 | 208 |
KT968663.1
|
Bos grunniens
|
Foot-and-mouth disease virus A
|
Foot-and-mouth disease virus
|
Picornaviridae
|
Aphthovirus
|
ssRNA(+)
|
KT968663.1 |Foot-and-mouth disease virus A isolate A/HY/CHA/2013, complete genome|set:KT968663|Foot-and-mouth disease virus A||2016-03-29T00:00:00Z|Sichuan University, College of Life Science|China|Yang,X., Yang,J., Wang,H., Zeng,F.|A/HY/CHA/2013|Foot-and-mouth disease virus|Aphthovirus|complete|Picornaviridae|ssRNA(+)|8103|GenBank|A|||China|China||Bos grunniens||2013-08-15||
|
aatcaggcaacactggcagcattattaacaactactacatgcagcagtaccagaactccatggacactcaacttggagacaacgctattagcggaggctccaatgaggggtccacggacacaacctctacacacacaaccaacacccaaaacaacgactggttctcaaagctggcgagttctgccttcaccgggcttttcggcgcactgctcgccgacaaaaagaccgaagaggcaactctcctggaggaccgcatcctcaccactcgcaatggacacaccacctccacaactcaatcgagtgtgggggtcacctgcgggtattcaactggtgaagaccacgtttctgggcctaacacatcaggtttggagacgcgggtggtgcaggctgagaggttttttaagaagcacttgtttgactggacaacggacaaaccctttggtcacattgaaaaattggaacttcccactgaacacaaaggtgtctacggacagctggtagaatcctttgcatacatgagaaatggctgggacgtggaggtgtctgctgttggcaaccagttcaacggcgggtgccttctcgtggccatgatacccgagttcaaagagttcacccagcgtgagaaataccagctcaccttgttcccacaccagtttatcagccccagaaccaacatgactgcgcacatcacggtcccgtaccttggtgtgaacagatatgaccagtacaagaagcacaaaccctggacgttggtggtgatggtggtctcaccacttaccactagctccattggtgcaacacagatcaaggtctacgccaacatcgccccgacccacgtacacgtggccggcgagctcccctcgaaagaggggatcgtgccggtcgcttgctcggacgggtacggtggcctggtgacaacagaccccaaaacagctgaccctgcttacggtatggtgtacaacccacccaggaccaattaccctgggcggtttacaaatttgttggatgtggcagaggcgtgccccaccttcctctgtttcgacgacgggaaaccgtatatcgtgacaaggacggacgaacaacgcctcttagccaagtttgacctctctcttgctgcaaagcacatgtcaaacacctacctgtcagggatagcacagtactacgcacagtactctggcaccatcaatttgcacttcatgtttactggttccactgactcaaaggcccgctacatggtggcgtatgttccacccggagtggaaacgccaccggacacgcctgagaaggctgcacactgcatccacgcagaatgggacacgggcctaaattccaaattcaccttttcaatcccgtacgtatctgctgcagactacgcgtacacagcgtctgacgaggcagaaacaacaaacgtacagggatgggtctgcatctaccaaattacccacgggaaggccgaacaagacactctggtcgtgtcggttagcgccggcaaagacttcgagctgcgcctccccattgacccccgtgcgcaaaccaccgccaccggggaatcagcagaccctgtcacaaccaccgttgagaactacggtggcgagacgcaagtacagcggcgttaccacaccgacgtcggcttcttaatggacaggttcgtgcagatcaagcctgtgggccccacacatgtcattgacctcatgcagacacaccaacacgggctggtgggcgccatgttgcgcgcggccacctactacttttctgatcttgagattgtggtgaaccacacgggtaacctaacgtgggtacccaacggagcacccgaggcagcactgcaaaacacgagcaaccccactgcttaccacaaagcgccgttcacgaggcttgcgctcccctacaccgcgccacaccgcgtgttggcaactgtgtacagtgggacgagcaagtactccgcacctcaaaaccggcgaggtgacttgggtcctctcgcggcgagactcgctgcacagctccctgcctccttcaacttcggtgcaattcgggccacggagatccgc
| 1 | 5 | 0.4 | 0 | 208 |
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|
32 | 8,103 | 210 |
KT968663.1
|
Bos grunniens
|
Foot-and-mouth disease virus A
|
Foot-and-mouth disease virus
|
Picornaviridae
|
Aphthovirus
|
ssRNA(+)
|
KT968663.1 |Foot-and-mouth disease virus A isolate A/HY/CHA/2013, complete genome|set:KT968663|Foot-and-mouth disease virus A||2016-03-29T00:00:00Z|Sichuan University, College of Life Science|China|Yang,X., Yang,J., Wang,H., Zeng,F.|A/HY/CHA/2013|Foot-and-mouth disease virus|Aphthovirus|complete|Picornaviridae|ssRNA(+)|8103|GenBank|A|||China|China||Bos grunniens||2013-08-15||
|
aacttgtactcgggtttcaccccgaggactatggtgtgcccggacgcgctgaaccgaaggtttcactttgacattgatgtgagtgccaaggatgggtataaaattaacaacaaattggacataatcaaagctcttgaggacacccacaccaacccagtggcgatgttccaatacgactgcgcccttcttaacggcatggcagtcgaaatgaagagaatgcaacaggacatgttcaagccccaaccgcctctgcagaacgtgtaccaactcgttcaggaggtgattgatcgggtggagctccacgagaaggtgtcgagccacccgattttcaagcagatctcaattccttcccaaaagtccgtgctgtactttctcattgagaagggccaacacgaggcagcaattgaattctttgaggggatggtacacgactccattaaggaggaactccgacccctcgtccaacagacctcatttgtgaaacgcgctttcaagcgcctgaaggaaaactttgagatcgttgccctatgtttgactcttctggcaaacatagtgatcatgatccgcgagactcgcaagagacaacaaatggtggatgatgcagtgagcgagtacatcgagaaggcaaacatcaccacagatgacaagactcttgacgaggcggaaaagaaccctctggagactaccggtgccagcaccgtcggcttcagagagagaactctcccgggacacaggacgggcgatgacgtgaattctgagcccgccaaacctgtggaagagcaaccacaagctgaaggaccctacgccgggccgcttgagcaccagaaacctctgagagtgagagccaaactaccacagcaggaggggccttacgctggtccgttggagagacagaaaccactgaaagtgaaagtgaatgccccggtcgtgaaggaaggaccttacgagggaccggtgaagaagcctgtcgctttgaaagttaaagccaagaacttgattgtcactgagagtggtgcccccccgaccgacttgcaaaagatggtcatgggcaacaccaagcctgttgagctcatcctcgacgggaggacagtagccatctgctgtgctactggagtgtttggcactgcctacctcgtgcctcgtcacctcttcgctgagaagtatgacaagatcatgttggacggcagggctatgacagacagtgactacagagtgtttgagtttgagattaaagtaaaaggacaggacatgctctcagacgctgcgctcatggtgctgcaccgtgggaaccgcgttagagacatcacgaaacactttcgtgatacagcacgaatgaagaaaggcacccccgtcgttggcgtgatcaacaacgctgacgttgggagactgattttctctggtgaggccctcacctacaaggacattgtagtgtgcatggacggagacaccatgccgggcctgtttgcctacaaagccgccaccaaggcaggctactgtgggggagccgttctcgccaaggacggagccgacgcgttcatcattggcactcactccgcgggtggcaatggagttgggtactgctcatgcgtatccagatccatgcttctcaagatgaaagcacacatcgaccccgaaccacaccacgaggggttaattgttgacaccagagatgtggaagagcgcgtgcacgtcatgcgcaaaaccaagcttgcacccaccgtggcacacggcgtgttcaaccccgaatacggccctgctgccttgtccaacaaggatccacggctgaatgaaggggttgtcctcgacgaggtcatcttctccaaacacaaaggagacacaaaaatgtcaccagaggacaaagcgctgttccgccgctgtgccgctgactacgcgtcacgcttgcacagtgcgctgggtacggcaaacgccccactgagcatctacgaggccatcaaaggtgtcgacggactcgacgccatggaaccagacacagcgcctggtctcccctgggccctccaggggaagcgccgcggcgcgctgattgactt
| 3 | 5 | 0.8 | 0 | 210 |
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] |
|
32 | 8,103 | 211 |
KT968663.1
|
Bos grunniens
|
Foot-and-mouth disease virus A
|
Foot-and-mouth disease virus
|
Picornaviridae
|
Aphthovirus
|
ssRNA(+)
|
KT968663.1 |Foot-and-mouth disease virus A isolate A/HY/CHA/2013, complete genome|set:KT968663|Foot-and-mouth disease virus A||2016-03-29T00:00:00Z|Sichuan University, College of Life Science|China|Yang,X., Yang,J., Wang,H., Zeng,F.|A/HY/CHA/2013|Foot-and-mouth disease virus|Aphthovirus|complete|Picornaviridae|ssRNA(+)|8103|GenBank|A|||China|China||Bos grunniens||2013-08-15||
|
ggttaattgttgacaccagagatgtggaagagcgcgtgcacgtcatgcgcaaaaccaagcttgcacccaccgtggcacacggcgtgttcaaccccgaatacggccctgctgccttgtccaacaaggatccacggctgaatgaaggggttgtcctcgacgaggtcatcttctccaaacacaaaggagacacaaaaatgtcaccagaggacaaagcgctgttccgccgctgtgccgctgactacgcgtcacgcttgcacagtgcgctgggtacggcaaacgccccactgagcatctacgaggccatcaaaggtgtcgacggactcgacgccatggaaccagacacagcgcctggtctcccctgggccctccaggggaagcgccgcggcgcgctgattgacttcgagaacggcacggtcggacccgaagttcaggctgccctagagctcatggagaaaagagagtacaagtttgtttgccagaccttcctgaaggacgagattcgcccgatggagaaagtgcgtgccggtaagacccgcattgtcgatgtcttgcctgttgaacatattctttataccaggatgatgattggcagattttgtgcgcaaatgcactcaaacaacggcccgcaaattggatctgcggttggctgtaaccctgatgttgattggcaaagatttggcacacatttcgcccaatacagaaacgtgtgggatgtggactattcggccttcgatgctaaccactgcagtgatgcgatgaacatcatgtttgaggaggtgttttgcacagactttggcttccacccaaacgctgagtggatactgaagacccttgtgaacacggaacacgcctacgagaacaaacgcattactgttgaaggcgggatgccctctggttgttccgcaactagcatcattaacacaattttgaacaacatctacgtgctctacgcgctgcgtaggcactatgagggagttgagctggacacttacaccatgatctcctacggagacgacatcgtggtggcgagtgatcatgacctggactttgaggctcttaagcctcacttcaaatctcttggccaaaccattactccggctgacaaaagtgacaaaggttttgttcttggtcattccattactgatgttactttcctcaaaagacacttccacatggattacggaactgggttttacaaacctgtgatggcctcgaagaccctcgaggctatcctctcctttgcacgccgtgggaccatacaggagaagttgacctccgtggcaggactcgctgtccactctggacctgacgagtaccggcgtctctttgagcccttccagggcctctttgagattccaagctacagatcactttacctgcgttgggtgaacgccgtgtgtggcgacgcataatccctcagatgtcacaattggcagaaagactctgaggcgagcgacgccataggagtgaaaagctcaaaagggcttttcccgcttcctttttccaaaaaa
| 4 | 5 | 1 | 0 | 211 |
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|
33 | 11,896 | 212 |
OU524416.1
|
Myotis nattereri
|
Lyssavirus bokeloh
|
Lyssavirus bokeloh
|
Rhabdoviridae
|
Lyssavirus
|
ssRNA(-)
|
OU524416.1 |Bokeloh bat lyssavirus isolate 45500 genome assembly, complete genome: monopartite||Lyssavirus bokeloh||2021-12-01T00:00:00Z|Friedrich-Loeffler-Institute, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems, Mecklenburg - Western Pomerania, 17493|Germany||45500|Lyssavirus bokeloh|Lyssavirus|complete|Rhabdoviridae|ssRNA(-)|11896|GenBank||||Germany|Germany||Myotis nattereri||2014|SAMEA9534145|PRJEB46019
|
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|
33 | 11,896 | 213 |
OU524416.1
|
Myotis nattereri
|
Lyssavirus bokeloh
|
Lyssavirus bokeloh
|
Rhabdoviridae
|
Lyssavirus
|
ssRNA(-)
|
OU524416.1 |Bokeloh bat lyssavirus isolate 45500 genome assembly, complete genome: monopartite||Lyssavirus bokeloh||2021-12-01T00:00:00Z|Friedrich-Loeffler-Institute, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems, Mecklenburg - Western Pomerania, 17493|Germany||45500|Lyssavirus bokeloh|Lyssavirus|complete|Rhabdoviridae|ssRNA(-)|11896|GenBank||||Germany|Germany||Myotis nattereri||2014|SAMEA9534145|PRJEB46019
|
cgaggtggatgctcttccagaggatatgaggaggctccagataagtgagcatgcaccttgtcacccatcagagggtgcttgcaagaaagaagacgggagtgatgatgacttctacatggctgagagtgaggacccctatgtacctcttcagtcttatctggacagtgtagggattcagatcgtgaggcagatgaaaaatggggagagattcctcaaaatctggtcccagaccgtagaagagatcatatcatatgtaactgtcaactttcctctgccgtcgggaaaaccaaccgatgacaaatccacccagactgtaggggagaagcccaggtcaaatgtccagccgggatctgccaagaaagaggatcacctgtctaaggccaaaatgacttctcaagaagcatctgggcctcctgcactcgagtggtccaccaccaacgatgaggatgatgcatcaatagaagcagagatagcccatcaaattgcagaaagtttctctaaaaagtataaattcccttctagatcttctggaatatttctatacaactttgagcaactgaagatgaatctggacgacatcgtgggagaggccaaaaagatccccggtgtgacaagattggctcaggatggtcttaagctcccactcaggtgcatattaggaggggtggcctcgacccattcaaagaagttccaactcctggttggttccgataagctgggcaagatcatgcaggatgatcttaaccgatatttggcctactaacttatcctccaagggtccccccaccccgcaaggccatctagtgcctcatctgactcatgaaaaaaacaggcaacaccactgacgcaatgaacttcttcagaaagatagtgaaaagttgcaaagatgaggaggatcaaaagccagctctaatgtcggctcctccagatgatgacgatctgtggcttcccccgccggagtatgtacctcttaccgagatcacagctaaaaagaatatgaggaacttttgtgtcaatggtgagattaagatttgcagccctaacgggtattcctttaggatcctgagacatattctgagatcgtttgatggagtatattctggaaatcggagaatgataggacttgtcaaggttgtgattggtttggccctctcaggtgctccggttccggaggggatgaattgggtctacaagataagacgcacccttgtgttccagtgggcagagtctcacggcccattagatggagaagagctggaatactcacaggagataacctgggatgatgattcagagttcataggtctacaaataaggataagtgcaagacaatgtcacatccaaggaaggatatggtgcatcaacatgaactccagggcgtgtcagttatggtccgatatgtctctcaagacccagcaggccgacgaggacaggaacacctctttattgctagaatgacctccccttcacatagcatcttactcagttacctctacaaaaggatgtacatgattttatcctccacctcttatgagcaatagaacaaaaatatgtaatggtgccactctaccgctgcattttattgagacaccctattgaacatcttcacatgtgaaacctctgcaatgtgaaaaaacatttaacatccctcaagaatccaaggcaccatgccaacccaagctgtcctcaccgcattcctcacaacaatcacagtttgtgtagggaaattccccatctacacgatccctgacaaactgggtccatggagccccatagatatcaatcacctcagctgcccaaacaatctggtcgtggaagatgaggggtgtacgaacttgtccgggttcacatatatggagttgaaggttggatacataacaacaataaaggtaggcgggttcacctgtacaggagtagtcaccgaggcagagacctataccaactttgtaggttatgtcacaaccactttcaagaggaagcacttccgtccacgtcctgatgcatgcagggaagcttatgattggaagacagcaggagaccctagatac
| 1 | 8 | 0.2 | 0 | 213 |
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|
33 | 11,896 | 215 |
OU524416.1
|
Myotis nattereri
|
Lyssavirus bokeloh
|
Lyssavirus bokeloh
|
Rhabdoviridae
|
Lyssavirus
|
ssRNA(-)
|
OU524416.1 |Bokeloh bat lyssavirus isolate 45500 genome assembly, complete genome: monopartite||Lyssavirus bokeloh||2021-12-01T00:00:00Z|Friedrich-Loeffler-Institute, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems, Mecklenburg - Western Pomerania, 17493|Germany||45500|Lyssavirus bokeloh|Lyssavirus|complete|Rhabdoviridae|ssRNA(-)|11896|GenBank||||Germany|Germany||Myotis nattereri||2014|SAMEA9534145|PRJEB46019
|
tcaaagggtgttaagccatgagatcctccagatgtcatcttcaattctggaaaggaggaagtcccgtgtccaagccagggatgaggagtgagatcatttgcagttgatcggtatacagggtatagtgatggtgacatcaattactggtgcttcagttgattcgggatgcatttattcagtcctttctgcgataaagggaagtaatcatattattctgtatttgatgtagacatttcaatacgccttgagataaggtacattctggaaagcagggatgtgggattctcacggtcggagaatctcttgatcagatgacgctcagctattttactaactaagtgtatatattgacaatgagtgctatcatctagattacattatcatgaaaaaacatgacactgggaaagaatcaacacctctcttctgagaaaccgcctcaatatgctggacccccaagaggtctatgatgatcccgtggacccggtggaacctgagacggatcttagaaacaactctgtggtgccgaacatcctcagaaactcagactacaatctgaactcccccctgatagaagacccttcaaggcttatgttggactggctgacaacagggaatagaccaaatcgattaaacatgactgacaatgcatttagatcatacaaagtgctcaagagttacttcaaaagattagacattgggtctctgaaggttggtggcattggggctcaagccgtgatgtcattgtggttgcacggagcccactctgagtccactagaagcaggaagtgtctgtctgatctgacccacttttatcagagagcatcccccattgagaagcttttgaactataccttggaaaatagaggacttcaaaccccgccagagggagttctctccagcttgaagaaggttgattatgaccaggcattcggtcgatatctgggcaatgtttattcctcttacttgttctttcatgtcataatattatatatgaacgcattggattgggaggaagaaaagacaattctagcattgtggaaagacctgagctccgtggacatcaaaaaggatcaagtaaagtttagagatcagatatgggggtctctggtagtaaccaaggactttatctattctcagagtgccaactgcctattcgataggaactacactctaatgttgaaggatctgtttctgtctaggtttaactcacttcttatcttactgtcacctccagagcccagatactcagatgacttgatctctcagctatgtcaactctatattgcaggagatcacgttctggcaatgtgtggcaactccggatatgatgtaatcaaaatgttggagccgtatgtcgtaaacagcctagtacagagggccgaaggattcaggcctttgatccactccttgggagattttcccctttttataaaagacaaggttacgcaacttgaaggtatcttcgggccaagtgcaagaaacttttttcatatcctggatcaactcgacaatatacatgatttggtatttgtttatggctgttataggcactggggacacccatatatagactatcgaaaggggctatctaagctgtatgatcaggttcatctcaaaaaggttatcgacaaggattatcaggaatgtttagctagcgacttggctaaaagaatcctcagatggggatttgacaaatactcaaagtggtatctagattctaaactacttgcacatgaccatcctttaaccccctatgtcaaaacccaaacttggccacccaaacatatagtagatatagtaggaaacacatggcacaggctcccaatcactcaaatctttgagattcccgagtctatggacccctccgagatcttagatgacaaatctcactctttcactagaaccaagttggcttcctggctctctgataatcgagggggtcccgtcccgagtgagaaggtgataatcacggctctctccagaccccctgtcaaccctcgtgagttcttaaagtcgatagatttaggaggcctgccggatgatgatct
| 3 | 8 | 0.5 | 0 | 215 |
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|
33 | 11,896 | 216 |
OU524416.1
|
Myotis nattereri
|
Lyssavirus bokeloh
|
Lyssavirus bokeloh
|
Rhabdoviridae
|
Lyssavirus
|
ssRNA(-)
|
OU524416.1 |Bokeloh bat lyssavirus isolate 45500 genome assembly, complete genome: monopartite||Lyssavirus bokeloh||2021-12-01T00:00:00Z|Friedrich-Loeffler-Institute, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems, Mecklenburg - Western Pomerania, 17493|Germany||45500|Lyssavirus bokeloh|Lyssavirus|complete|Rhabdoviridae|ssRNA(-)|11896|GenBank||||Germany|Germany||Myotis nattereri||2014|SAMEA9534145|PRJEB46019
|
tagctagcgacttggctaaaagaatcctcagatggggatttgacaaatactcaaagtggtatctagattctaaactacttgcacatgaccatcctttaaccccctatgtcaaaacccaaacttggccacccaaacatatagtagatatagtaggaaacacatggcacaggctcccaatcactcaaatctttgagattcccgagtctatggacccctccgagatcttagatgacaaatctcactctttcactagaaccaagttggcttcctggctctctgataatcgagggggtcccgtcccgagtgagaaggtgataatcacggctctctccagaccccctgtcaaccctcgtgagttcttaaagtcgatagatttaggaggcctgccggatgatgatctcataatcgggctgaagcccaaggagagggagctaaagattgagggtcggttctttgctctaatgtcgtggaatttgagactctattttgtaataacggagaagcttctagcaaactatattctacctctatttgatgccttgaccatgacagacaacctgaataaagtgttcaaaaagctcattgacagagttacaggacaagggttgcaggattactccagggtgacatatgctttccacttagactatgaaaaatggaacaaccaccaaagattggagtctacaaaagatgtgttctccgtactggatcatgtgttcggattgaagagggttttctccagaactcatgagttctttcagaagtcttgggtttactattccgacaggtcagaccttatagggctgtgggaaggccaaatatactgtctggatatgtcagatggccccacttgttggaacgggcaagacgggggtctagaagggttgagacagaagggttggagtttagtgagtcttttgatgatagatcgagagtcacagacaaggaacacgaggacaaagatcttggcacagggggacaaccaagtcctgtgccccacatacatgttgtcctccgggctgactgaagaggggcttctttatgagctggatagcatatcgaggaatgctctctccatatatcgagccattgaggatggggcatctaagttgggactgataataaaaaaggaggagacaatgtgcagttacgacttccttatatatggaaaaactcctttgttccggggcaacatcctggtccctgagtccaagaggtgggccagggtctcatgtatctccaatgaccagattgttaatcttgcgaacattatgtccacagtgtctactaatgctctgacagtggcacagcattcacaatccctaataaaacctatgagagactttttactcatgtcagtccaagctgtcttccactatttactgttcagccctatattgaaagacagagtttataagatcttaagtgcagaaggggacgatttcctccttgccatgtcaagaattgtttatctggacccatcactggggggtgtatcaggtatgtcattgggccgttttcacatacgacagttctctgaccctgtatctgaagggttggcgttttggaaggaaatttggtcaagctcttcggaggcttggatccactctttgtgtcaggaggcaggcaatccggatctgggtgacaggagtctagaaagtttcacccgtcttcttgaggaccccaccacgttgaacataagaggaggagccagcccaactattttgttgaaggatgccatcagaaaggccctttatgatgaagtcgacaaggtggaaaactcagagttcagagaggcaatattattgtctaaaacccatagagataattttatcctatttctgagatcagtggagccacttttccctagatttcttagcgagttattcagttcatcttttctcgggataccggagtctattattggactcattcagaactctagaacgattcggcggcaattcaggaggagtctctctaggaccttggaagaatccttcttcaactcagaggttcatggaatcaaccgaatgacccaagtaccacaa
| 4 | 8 | 0.6 | 0 | 216 |
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|
33 | 11,896 | 217 |
OU524416.1
|
Myotis nattereri
|
Lyssavirus bokeloh
|
Lyssavirus bokeloh
|
Rhabdoviridae
|
Lyssavirus
|
ssRNA(-)
|
OU524416.1 |Bokeloh bat lyssavirus isolate 45500 genome assembly, complete genome: monopartite||Lyssavirus bokeloh||2021-12-01T00:00:00Z|Friedrich-Loeffler-Institute, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems, Mecklenburg - Western Pomerania, 17493|Germany||45500|Lyssavirus bokeloh|Lyssavirus|complete|Rhabdoviridae|ssRNA(-)|11896|GenBank||||Germany|Germany||Myotis nattereri||2014|SAMEA9534145|PRJEB46019
|
gagtctagaaagtttcacccgtcttcttgaggaccccaccacgttgaacataagaggaggagccagcccaactattttgttgaaggatgccatcagaaaggccctttatgatgaagtcgacaaggtggaaaactcagagttcagagaggcaatattattgtctaaaacccatagagataattttatcctatttctgagatcagtggagccacttttccctagatttcttagcgagttattcagttcatcttttctcgggataccggagtctattattggactcattcagaactctagaacgattcggcggcaattcaggaggagtctctctaggaccttggaagaatccttcttcaactcagaggttcatggaatcaaccgaatgacccaagtaccacaaagaatagggaaggtgtgggcatgctcggcagagagagcagatctcctgagagagatttcctggggtagaaaagtggtaggcaccactgtgcctcatccagcagagatgctagttctagtgcctaggtcttccatctcgtgtgtatgtacccaaactggagaagatagcccccgaatctctgtatctgtattaccctcattcgatcgatctttcttctctagaggtcctctgaaagggtatctaggctcctcaacatctatgtcaacccagttgttccatgcttgggagaaggtgaccaacgtccatgtggtaaagagagcgttgtccctaaaagagtccataaactggtttatagataggaaatccaatctagctcagacactgatcaaaaacatcatctcgctgacagggcctctattccctcttgaagagacccctgtgttcaagaggacaggatctgcactccaccggttcaagtcagcgagatacagcgaagggggttactcttctatctgccccaatctgttgtcccacatctccgtcagtacagatacaatgtctgacttgacacaagatggaaggaactttgactttatgttccaacccctcatgctgtacgcccaaacatggacctctgagcttgtgcagaaggacatcagattgagagattcaacatttcattggcatcttcgctgtcttaaatgtatcagaccaattgatgaaataaccctagaagctcctcaagtcttcaccttcccagatgtgtctaagaggatctcaaggatggtgtcaggcgcagtccctcagtttcagagactcccagaagttgttttgaagcctgggaagtttgaatccttgaatggtaaagagaaatccagacatataggcactgcccaagggttgttgtattccatactggtggccacccatgatgcaggatacaacgatggtaccatatttcctgttaatatatacagcaaggtgtctccaagggattatctgagggggttggccaggggtgttttgataggatcatcgatctgttttctgaccagaatgaccaacatcaatattaatagacctttagagcttatatctggtgttatatcctatatattgctaagacttgacaatcatccatcattgtatgtgatgctcaaggagtcctctcttaggtcagagatattctcaatcccccagaaaatccctgcagcttatccgaccacgatgaaagagggcaacagatctgttttgtgttatctccagcatgtactccgttatgagagagacatgatcacgtcctcccctgacaatgactggctttggatattctctgacttcaggagtgccaagatgacctacttgaccctggtaacttatcagtcacatatcttacttctaaagattgaaaagagcctctccaagcagatgagaatcaggcttagacagttgagttcactgatgagacaggtcttaggaggtcatggagaggattcgctagagtctgatgaggacattcaggggttgttaagagatgccctgcaaagaactcgatgggtggatcaagaggtccgtcatgcagcaaagactatgacgggagatcacagccctagtaggaagattcctcggaaaggaggttgttcagaat
| 5 | 8 | 0.8 | 0 | 217 |
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] |
|
33 | 11,896 | 218 |
OU524416.1
|
Myotis nattereri
|
Lyssavirus bokeloh
|
Lyssavirus bokeloh
|
Rhabdoviridae
|
Lyssavirus
|
ssRNA(-)
|
OU524416.1 |Bokeloh bat lyssavirus isolate 45500 genome assembly, complete genome: monopartite||Lyssavirus bokeloh||2021-12-01T00:00:00Z|Friedrich-Loeffler-Institute, Federal Research Institute for Animal Health, Institute of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems, Mecklenburg - Western Pomerania, 17493|Germany||45500|Lyssavirus bokeloh|Lyssavirus|complete|Rhabdoviridae|ssRNA(-)|11896|GenBank||||Germany|Germany||Myotis nattereri||2014|SAMEA9534145|PRJEB46019
|
gttttgtgttatctccagcatgtactccgttatgagagagacatgatcacgtcctcccctgacaatgactggctttggatattctctgacttcaggagtgccaagatgacctacttgaccctggtaacttatcagtcacatatcttacttctaaagattgaaaagagcctctccaagcagatgagaatcaggcttagacagttgagttcactgatgagacaggtcttaggaggtcatggagaggattcgctagagtctgatgaggacattcaggggttgttaagagatgccctgcaaagaactcgatgggtggatcaagaggtccgtcatgcagcaaagactatgacgggagatcacagccctagtaggaagattcctcggaaaggaggttgttcagaatgggtttgttctgcccaacaagttgcaatttcaacttcttctaatcctgccccaatgtctgaattagatgttagagctttatccaggaagctccagaacccactaatatcgggtttgagggtggtacaatgggccacaggtgctcactacaaattaaagccgatacttgacgatcttgatgcatatccatccctctgtctagttgtaggagatggatccggcgggatctcaaggactgtgcttagcatgttccccgatgctagattggtttttaatagcttgttagaggttagtgatctaatggcctctgggacacatccattacccccctcagcgatcatgagtgggggaagtgatatagtgtctagggtcatagatttcgggtcaatctgggagaaaccttcagacctaaggaacctttctacctggagatactttcagtctatccagggtcgccttaacatgtcctatgatttgatcatctgcgatgcagaagtgacggacatcccatcagtcaacaaaatcactctgttgatgtctgatttctcactctcaattaatggccccctcaacctaatctttaaaacctatgggaccatgctggtgaactcagattataaagccatccagcatctctcaagggctttcccgtctgtcgcaggatatatcacccagatgacatcatccttttcatctgaaatctacctgaagttctctaagaggggtaaattctttagagattctgagtatctgacctcctctactctgcgggagatgagtcttgtgctattcaattgtagcagtcctaaaagcgagatgcaaagggcccgttccttgaactatcaggacttggtgcgaggttttcctgaggagattatttcaaacccttacaatgagatgataataacccttatagacagtgaagtagagtccttccttgttcacaagatggtggatgatttggagcttcagagggggactctgtcaaagatgtccatcattatcgccattgtcgtagtcttttcgaatagggtgttcaatgtgtcaaagccattgagcggctcagtgttctacccaccttcagacccgaagattttgagacacttcaacatttgttgcagcactctgatgtatctgtcgactgctttgggtgatgtgatgaattttgctcgactccatgagctctataacaacccggtcacttactattttaagaagcaagtcgtcaaggggagcatatatctatcgtggagctggtcggatagcacatctgtcttcaagagggtggcatgcaactccaatctaagtctatcctctcactggataagactgatttacaaggtagtccggacaactcggtttgttggaaacaccaatgaactctctaaagaggtagaaaaacacttaaggggatacaacagatggatcaatctcaaagatatccgatctcggtcctccatattagattacagtagcttatgactttgctgagcacctcatataggctcttccatcttattatacactaaatcttgaaaaaacacacctaagggccataaccggtacctctctgggggtttcttttctttattgttttttttgttaagcg
| 6 | 8 | 0.9 | 0 | 218 |
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|
34 | 15,267 | 223 |
MF965226.1
|
Homo sapiens
|
Mumps virus genotype G
|
Orthorubulavirus parotitidis
|
feces
|
Paramyxoviridae
|
Orthorubulavirus
|
ssRNA(-)
|
MF965226.1 |Mumps virus genotype G strain MuVs/Massachusetts.USA/22.16/[G], complete genome|set:MF965226|Mumps virus genotype G|SRR11741470,SRR11741471,SRR8143060,SRR8143061,SRR8143085|2017-11-01T00:00:00Z|Broad Institute, Infectious Disease Initiative|USA|Byrne,E.H., Chak,B., Grad,Y.H., Hennigan,S., Krasilnikova,L.A., Matranga,C.B., Metsky,H.C., Park,D.J., Piantadosi,A., Sabeti,P.C., Schaffner,S.F., Siddle,K.J., Smole,S., Wohl,S., Yozwiak,N.L.||Orthorubulavirus parotitidis|Orthorubulavirus|complete|Paramyxoviridae|ssRNA(-)|15267|GenBank||||USA: Massachusetts|USA|MA|Homo sapiens|feces|2016-06-03|SAMN07362272|PRJNA394142
|
tgccacctttgcacctgggcctgttagcaatgcggctaacaagaagacattccgaacctgcttccgaatactggcactatctgtacaagctgtcacccttatattagttattgtcactttaggtgagcttgtaaggatgatcaatgatcaaggcttgagcaatcagttgtcttcaattacagataagataagagagtcagctactatgattgcatctgctgtgggagtaatgaatcaagttattcatggagtaacggtatccttacccctacaaattgagggaaaccaaaatcaattgttagccacacttgccacaatctgcaccagccaaaaacaagtctcaaactgctctacaaacatccccttagtcaatgacctcaggtttataaatgggatcaataaattcatcattgaagattacgcaactcatgatttctctatcggccatccactcaatatgcccagctttatcccaactgcaacttcacccaatggttgcacaagaattccatccttttctttaggtaagacacactggtgctacacacataatgtaattaatgccaactgcaaggaccatacttcgtctaaccaatatgtgtccatggggattctcgttcagaccgcgtcaggttatcctatgttcaaaaccttaaaaatccaatatctcagtgatggcctgaatcggaaaagctgctcaattgcaacagtccctgatgggtgcgcgatgtactgttatgtctcaactcaacttgaaaccgacgactatgcggggtccagtccacccacccaaaaacttaccctgttattctataatgacaccgtcacagaaaggacaatatctccatctggtcttgaagggaattgggctactttggtgccaggagtggggagtgggatatattttgagaataagttgatcttccctgcatatggtggtgtcttgcccaatagtacactcggggttaaatcagcaagagaatttttccggcctgttaatccatataatccatgttcaggaccacaacaagatttagaccagcgtgctttgaggtcatacttcccaagttatttctctaatcgaagaatacagagtgcatttcttgtctgtgcctggaatcagatcttagttacaaattgtgaactagttgtcccctcaagcaatcagacaatgatgggtgcagaagggagagttttattgatcaataatcgactattatattatcagagaagtaccagctggtggccgtatgaactcctctacgagatatcattcacatttacaaactctggtccatcatctgtaaatatgtcctggatacctatatattcattcactcgtcctggttcaggcaattgcagtggtgaaaatgtgtgcccgactgcttgtgtgtcaggggtttatcttgatccctggccattaactccatatagccaccaatcaggtattaacagaaatttctattttacaggtgctctattaaattcaagtacaactagagtaaatcctaccctttatgtctctgctcttaataatcttaaagtattagccccatatggtactcaaggactgtttgcctcgtacaccacaaccacctgctttcaagataccggtgatgctagtgtgtattgtgtttatattatggaactagcatcaaatattgttggagaattccaaattctacctgtgctaactagattgactatcacttgaatcatagtgaatgcagcgggaagccctattggcgtgtctcaatttttatcgattattaagaaaaaataggccagaatggcgggcctaaatgagatactcctacctgaagtacatttaaactcacccatcgttagatataagcttttctactatatattacatggccagttaccaaatgatttggagccagatgacttgggcccactagcaaatcagaattggaaggcaattcgagccgaagaatcccaggttcatgcacgtttaaaacagatcagagtagaactcatcgcaaggattcccagtctccggtggacccgctctcaaagagagattg
| 4 | 10 | 0.5 | 0 | 223 |
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] |
34 | 15,267 | 224 |
MF965226.1
|
Homo sapiens
|
Mumps virus genotype G
|
Orthorubulavirus parotitidis
|
feces
|
Paramyxoviridae
|
Orthorubulavirus
|
ssRNA(-)
|
MF965226.1 |Mumps virus genotype G strain MuVs/Massachusetts.USA/22.16/[G], complete genome|set:MF965226|Mumps virus genotype G|SRR11741470,SRR11741471,SRR8143060,SRR8143061,SRR8143085|2017-11-01T00:00:00Z|Broad Institute, Infectious Disease Initiative|USA|Byrne,E.H., Chak,B., Grad,Y.H., Hennigan,S., Krasilnikova,L.A., Matranga,C.B., Metsky,H.C., Park,D.J., Piantadosi,A., Sabeti,P.C., Schaffner,S.F., Siddle,K.J., Smole,S., Wohl,S., Yozwiak,N.L.||Orthorubulavirus parotitidis|Orthorubulavirus|complete|Paramyxoviridae|ssRNA(-)|15267|GenBank||||USA: Massachusetts|USA|MA|Homo sapiens|feces|2016-06-03|SAMN07362272|PRJNA394142
|
ctagcatcaaatattgttggagaattccaaattctacctgtgctaactagattgactatcacttgaatcatagtgaatgcagcgggaagccctattggcgtgtctcaatttttatcgattattaagaaaaaataggccagaatggcgggcctaaatgagatactcctacctgaagtacatttaaactcacccatcgttagatataagcttttctactatatattacatggccagttaccaaatgatttggagccagatgacttgggcccactagcaaatcagaattggaaggcaattcgagccgaagaatcccaggttcatgcacgtttaaaacagatcagagtagaactcatcgcaaggattcccagtctccggtggacccgctctcaaagagagattgctatactcatttggccaagaatacttccaatcctccaagcatatgatcttcggcaaagtatgcaattgcccacagtatgggagaaattgactcaatccacagttaatcttataagtgatggtctagaacgagttgtattacacatcagcaatcaactgacaggcaagccaaacttgtttaccagatctcgaacaggacaagacactaaggactactcaattccatccactagagagctatctcaaatatggtttaacaatgagtggagtggatctgtaaagacctggcttatgattaaatatagaatgaggcaactaatcacaaaccaaaagacaggtgagttaacagatttagtaaccattgtggatactaggtccactctatgcattattaccccagaattagttgctttatactctaatgagcacaaagcattaacgtacctcacctttgaaatggtactaatggtcactgatatgttggagggacgactgaatgtttcttctttgtgcacagctagtcattatctgtccccactaaagaaaagaatcgaaattctcctaacactagttgatgaccttgctctactcatgggggacaaagtatacggtgttgtctcttcacttgagagttttgtttacgcccaattacagtatggtgatcctgttgtagacattaagggtacattctatggatttatatgtaatgagattctcgatctgctgactgaggacaacatttttactgaggaggaggcaaacaaggttctcctggacttgacttcacagtttgacaatctatcccctgatttaactgctgaactcctctgcattatgagactttggggccaccccacattaaccgccagccaagcagcatccaaggtccgagagtccatgtgcgctcccaaggtgttagatttccaaacaataatgaagaccctggctttctttcacgcaatccttattaacggttataggaggagccataatggaatctggcctcctactactcttcatggcaatgcccccaagagcctcattgagatgcggcatgataattcagagcttaagtatgagtatgtcctcaagaattggaaaagtatatctatgttaagaatacacaaatgctttgatgcatcacctgatgaagatctcagcatattcatgaaggataaggcaataagctgtccaaagcaagactggatgggagtatttaggaggagcctcataaaacagcgatatcgagatgcgaatcgacctctaccacaaccattcaaccgacggctactgttgaattttctagaggatgacagattcgatcccattaaagagcttgagtatgtcaccagtggagaatatcttagggacccagaattttgtgcatcttactccctcaaagagaaggagataaaggctacaggtcgaatatttgcaaaaatgacaaagagaatgagatcgtgccaagtaattgcggaatcattgttggccaatcatgcaggtaaattaatgagagaaaatggagttgttttagaccagttaaaattgacaaaatctttgttaacgatgaaccaaattggtattatatcagagaacagccgaagatccactgctgacaacatgactttggcacactccggttcaaataa
| 5 | 10 | 0.6 | 0 | 224 |
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34 | 15,267 | 225 |
MF965226.1
|
Homo sapiens
|
Mumps virus genotype G
|
Orthorubulavirus parotitidis
|
feces
|
Paramyxoviridae
|
Orthorubulavirus
|
ssRNA(-)
|
MF965226.1 |Mumps virus genotype G strain MuVs/Massachusetts.USA/22.16/[G], complete genome|set:MF965226|Mumps virus genotype G|SRR11741470,SRR11741471,SRR8143060,SRR8143061,SRR8143085|2017-11-01T00:00:00Z|Broad Institute, Infectious Disease Initiative|USA|Byrne,E.H., Chak,B., Grad,Y.H., Hennigan,S., Krasilnikova,L.A., Matranga,C.B., Metsky,H.C., Park,D.J., Piantadosi,A., Sabeti,P.C., Schaffner,S.F., Siddle,K.J., Smole,S., Wohl,S., Yozwiak,N.L.||Orthorubulavirus parotitidis|Orthorubulavirus|complete|Paramyxoviridae|ssRNA(-)|15267|GenBank||||USA: Massachusetts|USA|MA|Homo sapiens|feces|2016-06-03|SAMN07362272|PRJNA394142
|
atgcgaatcgacctctaccacaaccattcaaccgacggctactgttgaattttctagaggatgacagattcgatcccattaaagagcttgagtatgtcaccagtggagaatatcttagggacccagaattttgtgcatcttactccctcaaagagaaggagataaaggctacaggtcgaatatttgcaaaaatgacaaagagaatgagatcgtgccaagtaattgcggaatcattgttggccaatcatgcaggtaaattaatgagagaaaatggagttgttttagaccagttaaaattgacaaaatctttgttaacgatgaaccaaattggtattatatcagagaacagccgaagatccactgctgacaacatgactttggcacactccggttcaaataagcacagaattaataatagtcaattcaagaagaataaagacaataaacatgagatgcctgatgatggttttgagatagcagcctgctttctaacaactgacctcacaaaatactgcttaaattggaggtaccaagtcatcatcccctttgcgcgtacattgaattcaatgtatggtatacctcacctgttcgaatggatacatttaaggctaatgcgaagcactctctatgtcggtgatcccttcaatcctccatcagatcctacccaacttgaccttgatacagctctcaatgatgatatatttatagtttctcctcgaggaggaatcgagggtttatgtcaaaaattatggactatgatttccatctcaacaatcatattatctgcaactgaggcaaacactagagttatgagcatggtccagggtgacaaccaggcgattgcaatcaccactagagtagtacgctcgctcagtcattccgagaagaaggagcaagcttataaagcaagtaaattattctttgaaaggcttagagccaacaatcatggaattggacaccacttgaaagaacaagaaacgatcctcagttctgatttcttcatatacagtaagagagtgttttacaaaggtcggattttgactcaagcattaaagaacgtgagcaagatgtgcttaacagccgatatactaggggactgttcacaagcatcatgctccaatttagctactactgtaatgcgcctgactgagaatggggttgagaaagatttgtgttactttctgaatgcattcatgacaatcagacagttatgttatgatctagtatttccccaaactaaatctcttagtcaggacatcactaatgcttatcttaaccatccaatacttatctcaagattgtgtctattaccatctcaattggggggcctaaactttctctcatgtagtcgcctgttcaatagaaacatcggagacccattagtgtctgcaattgctgatgtgaaacgattaattaaagctggctgtctagatatctgggtcctgtataacatccttggaaggaggcctggaaaaggtaagtggagcactctggcagctgatccttatactctaaacatagattatttagttccttcaacaacttttttaaagaaacatgcccaatatacattgatggaacggagtgttaatcccatgctccgtggagtattcagtgaaaatgcagctgaggaagaagaggaactcgcacagtatctattagatcgtgaggtagtcatgcccagggttgcacatgtaatacttgcccagtctagctgcggtagaagaaaacagattcaaggttacttggattccactagaactattatcaggtattcactggaggtgagaccattgtcagcaaagaagctaaatacagtaatagaatataacttattgtatctatcttacaatttggagattattgaaaaacccaatatagtacaaccttttttgaatgcaatcaatgttgatacttgtagcatcgatatagccaggtcccttagaaaactatcctgggcaactttacttaatggacgtcccatcgagggattagaaacacctgatcccattgaattggtacatgggtgtttgataattgggtcagat
| 6 | 10 | 0.7 | 0 | 225 |
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] |
35 | 10,672 | 228 |
EU179861.1
|
dengue virus type I
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU179861.1 |Dengue virus type 1 isolate DS212-110306, complete genome|set:EU179861|dengue virus type I||2007-11-20T00:00:00Z|University of Malaya, Medical Microbiology, Faculty of Medicine|Malaysia|Osman,O., Fong,M.Y., Sekaran,S.D., Devi,S.|DS212-110306|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10672|GenBank|1||1|Brunei|Brunei||||2006||
|
gtggaccgcaaagaacagtttcgaatcggaagcttgcttaacgtagttctaacagttttttattagagagcagatctctgatgaacaaccaacggaaaaagacgggtcgaccgtctttcaatatgctgaaacgcgcgagaaaccgcgtgtcaactgtttcacagttggcgaagagattctcaaaaggattgctttcaggccaaggacccatgaaattgatgatggcttttatagcattcctaagatttctagccatacccccaacagcaggaattttggctagatggagctcattcaagaagaatggagcgatcaaagtgttacggggtttcaagaaagagatctcaaacatgttgaacataatgaacaggaggaaaagatctgtgaccatgctcctcatgctgctgcccacagccttggcgttccatctgaccacccgaggaggagagccgcacatgatagtcagcaagcaagaaagaggaaaatcacttttgtttaagacctctgcaggtgtcaacatgtgtacccttattgcaatggatttgggagagttatgtgaagacacgatgacttacaaatgccctcggatcactgagacggaaccagatgacgttgactgttggtgcaatgccacggagacatgggtgacctatggaacatgttcccaagctggtgaacaccgacgagacaaacgttccgtcgcattggcaccacacgtagggcttggtctagaaacaagaaccgaaacgtggatgtcctctgaaggcgcttggagacaaatacaaaaagtggagacttgggctctaagacacccaggattcacggtgatagccctttttctagcacatgctataggaacatccatcacccagaaagggattatttttattttgctgatgctggtaactccatccatggccatgcggtgcgtgggaataggcaacagagacttcgtggaaggactctcaggagctacgtgggtggatgtggtgctggagcatggaagttgcgtcactaccatggcaaaagacaaaccaacactggacattgaactcctgaagacggaggtcacaaaccctgcagtcctgcgcaaattgtgcattgaagctaaaatatcaaacaccaccaccgattcgagatgtccaacacaaggagaagccacgctggtggaagagcaggacacgaactttgtgtgccgacgaacgttcgtggacagaggctggggcaatggttgtgggctattcggaaaaggtagcttaataacgtgtgctaagtttaagtgtgtgacaaaactggaaggaaacatagtccaatatgaaaacttaaaatattcagtcatagtcaccgtacacactggagaccaacaccaagttggaaatgagaccacagaacatggaacaactgcaaccataacacctcaagctcccacgtcggaaatacagctgacagactacggagctctaacattggactgctcacctagaactgggctggactttaatgagatggtgctgttgacaatgaaagaaaaatcatggcttgtccacaaacaatggtttctagacttaccactgccttggacctcgggggcttcaacatctcaagagacttggaacagacaagatctgctggtcacatttaagacagctcatgcaaagaagcaggaagtagtcgtactggggtcacaagaaggagcaatgcacactgcgttgactggggcgacagaaatccagacgtcaggaacgacgacaatcttcgcaggacacctgaaatgcagactaaaaatggataaactgaccttaaaaggggtgtcatatgtaatgtgcacagggtcattcaagctagagaaggaagtggctgagactcagcatggaactgttctagtgcaggtcaaatacgaaggaacagatgcaccatgcaagatccccttttcgaccaaagatgagaagggagtgacccagaatagattgataacagccaaccccatagtcattgacaaagaaaaaccagttaacattgaagcggagccaccttttggtgagagctac
| 0 | 7 | 0.1 | 0 | 228 |
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||
35 | 10,672 | 230 |
EU179861.1
|
dengue virus type I
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU179861.1 |Dengue virus type 1 isolate DS212-110306, complete genome|set:EU179861|dengue virus type I||2007-11-20T00:00:00Z|University of Malaya, Medical Microbiology, Faculty of Medicine|Malaysia|Osman,O., Fong,M.Y., Sekaran,S.D., Devi,S.|DS212-110306|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10672|GenBank|1||1|Brunei|Brunei||||2006||
|
agaaccacaacagtcacaggaaagataatccatgaatggtgctgcagatcttgcacgttaccccccctacgtttcaaaggagaagacgggtgctggtacggtatggaaatcagaccagtcaaggagaaggaagagaacctagtcaaatcaatggtctctgcagggtcaggagaagtggacagtttttcactaggactgctatgcatatcaataatgatcgaagaggtaatgagatccagatggagtagaaaaatgctgatgactggaacattggctgtgttcctccttcttacaatgggacaattgacatggaatgatctgatcaggctatgtatcatggttggagccaatgcttcagacaagatggggatgggaacaacgtacctagctttgatggccactttcagaatgagaccaatgttcgcagtcgggctgttgttccccagactaacgtctagagaagttcttcttctcacagttggattgagtctagtggcatctgtagaactaccaaattccttggaggagctaggggatggacttgcaatgggcatcatgatgttgaaattactaactgattttcagtcacaccagctatgggctgccttgctgtctctaacatttgtcaaaacaactttatcattgcactacgcatggaagacaatggctatgatactgtcaattgtatctctcttccctctatgcctgtccacgacttctcaaaaaacaacatggctcccggtgttgctgggatctcttggatgcaaaccactaaccatgtttcttataacagaaaacaaaatctggggaaggaaaagttggcctctcaatgagggaattatggctgttggaatagttagtattcttctaagttcactcctcaaaaatgatgtgccgctagctggcccactaatagctggaggcatgctaatagcatgttatgttatatctggaagctcggccgatttatcattggagaaagcggctgaggtctcctgggaagaagaagcagaacactctggtgcctcacacaacatactagtggaggtccaagatgatggaaccatgaagataaaggatgaagagagggatgacacacttaccattctcctcaaagcaactttgctagcaatctcaggggtgtacccaatgtcaataccggcgaccctctttgtgtggtacttttggcagaaaaagaaacagagatcaggagtgctatgggacacacccagccctccagaagtggaaaaagcagtccttgatgatggcatttatagaattctccaaagaggactgttgggcaagtctcaagtaggagtgggagtttttcaagaaggtgtgtttcacacaatgtggcacgtcaccaggggagctgtcctcatgtatcaagggaagagattggaaccaagttgggctagtgtcaaaaaagacttgatctcatatggaggaggttggaggtttcaaggatcctggaacacgggagaagaagtgcaggtgattgctgttgaaccggggaagaaccctaaaaacgtacagacagcgccgggtacctttaagacttctgaaggcgaagttggagctatagctctagactttaaacccggcacatctggatctcctattgtgaacagggagggaaaaatagtaggtctttatggaaatggagtggtgacaacaagtggaacctacgtcagtgccatagcccaagccaaacattcacaagaaggacctctaccagagattgaggacgaggtgtttaggaaaagaaacttaacaataatggacttacatccaggatcgggaaaaacaagaagataccttccagccatagtccgtgaggctataaaaagaaagttacgcacgctagtcttagctcccacaagagttgtcgcctctgaaatggcagaggcgctcaagggaatgccaataaggtaccagacaacagcagtgaaaagtgaacacacgggaaaggagatagttgaccttatgtgtcatgccacttttaccatgcgtctcctttcccctgtgagagttcccaattataatat
| 2 | 7 | 0.4 | 0 | 230 |
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] |
||
35 | 10,672 | 231 |
EU179861.1
|
dengue virus type I
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU179861.1 |Dengue virus type 1 isolate DS212-110306, complete genome|set:EU179861|dengue virus type I||2007-11-20T00:00:00Z|University of Malaya, Medical Microbiology, Faculty of Medicine|Malaysia|Osman,O., Fong,M.Y., Sekaran,S.D., Devi,S.|DS212-110306|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10672|GenBank|1||1|Brunei|Brunei||||2006||
|
gtctttatggaaatggagtggtgacaacaagtggaacctacgtcagtgccatagcccaagccaaacattcacaagaaggacctctaccagagattgaggacgaggtgtttaggaaaagaaacttaacaataatggacttacatccaggatcgggaaaaacaagaagataccttccagccatagtccgtgaggctataaaaagaaagttacgcacgctagtcttagctcccacaagagttgtcgcctctgaaatggcagaggcgctcaagggaatgccaataaggtaccagacaacagcagtgaaaagtgaacacacgggaaaggagatagttgaccttatgtgtcatgccacttttaccatgcgtctcctttcccctgtgagagttcccaattataatatgattatcatggatgaagcacatttcactgatccagccagcatagcagccagagggtacatctcaacccgagtgggtatgggtgaagcagctgcaattttcatgacagccactccccccggatcgatggaggcctttccacagagcaatgcagctatccaagatgaggaaagagacattcctgaaaggtcatggaactcaggttatgactggatcaccgatttcccaggtaaaacagtttggtttgttccaagcatcaaatcaggaaatgacattgccaactgtttaagaaagaatgggaaacgggtgatccaattgagcagaaaaaccttcgacactgagtaccagaagacaaaaaataacgactgggactatgttgttacaacagacatatccgaaatgggagcaaacttccgagcagacagggtaatagacccgaggcggtgcctgaaaccagtaatactaaaagatggcccagagcgtgtcattctagccggaccgatgccagtgactgtggctagcgccgcccagaggagaggaagaattggaaggaaccaaaataaggaaggtgatcagtatatttacatgggacagcctctaaacaatgatgaggaccacgcccattggacagaagcaaaaatgctccttgacaacataaacacaccagaagggattatcccagccctctttgagccggagagagaaaagagtgcagcaatagacggggaatacagactacggggtgaagcgaggaaaactttcgtggagcttatgagaagaggagatctacctgtctggctatcccacaaagttgcctcagaaggcttccagtactccgacagaaggtggtgctttgatggagaaaggaacaaccaggtgctggaggagaacatggacgtggagatctggacaaaagaaggagaaagaaagaaactacgaccccgctggctggatgccagaacatactctgacccactggctctgcgcgaattcaaagagttcgcagcaggaagaagaagcgtctcaggtgacctaatattagaaatagggaaacttccacaacatttaacgcaaagggcccagaatgccttggacaatctggttatgctgcataactctgaacagggaggaaaagcctacagacacgccatggaagaactaccagacaccatagaaacattaatgcttctggctttgatagctgtgctgactggtggggtgacgctgttcttcctatcaggaaggggtctaggaaaaacatccattggcctactctgcgtgatggcctcaagtgcactgttatggatggccagtgtggaaccccattggatagcggcctctatcatactggagttctttctgatggtgctgcttattccagaaccggacagacagcgcactccacaagacaaccagctagcatacgtggtgataggtctactattcatgatattgacagtggcagccaatgagatgggattactggaaaccacaaagaaggacctagggattggtcatgcagctgctgaaaaccaccatcatgctgcaatgctggacgtagacctacatccagcttcagcctggaccctctatgcagtggccacaacaattattactcccatgatgagacacacaattgaaaacacaacg
| 3 | 7 | 0.6 | 0 | 231 |
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] |
||
35 | 10,672 | 233 |
EU179861.1
|
dengue virus type I
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU179861.1 |Dengue virus type 1 isolate DS212-110306, complete genome|set:EU179861|dengue virus type I||2007-11-20T00:00:00Z|University of Malaya, Medical Microbiology, Faculty of Medicine|Malaysia|Osman,O., Fong,M.Y., Sekaran,S.D., Devi,S.|DS212-110306|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10672|GenBank|1||1|Brunei|Brunei||||2006||
|
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| 5 | 7 | 0.9 | 0.000488 | 233 |
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||
36 | 7,401 | 234 |
MF662692.1
|
Homo sapiens
|
Enterovirus A71
|
Enterovirus A
|
feces
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
MF662692.1 |Enterovirus A71 strain KW24/YN/CHN/2012, complete genome|set:MF662692|Enterovirus A71||2019-08-08T00:00:00Z|Institute of Medical Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Medical Genetics|China|Yu,L., Sun,H., Ma,S.||Enterovirus A|Enterovirus|complete|Picornaviridae|ssRNA(+)|7401|GenBank||||China|China||Homo sapiens|feces|2012-06-17||
|
ttaaaacaggcctgtgggttgcacccacccacagggcctactgggcgcaagcactttggtattttggtacctttgtgcgcctgttttataccccccccccagtgaaacttagaagcagcaaatcacgatcaatagcaggcataacgctccagttatgtctcgatcaagcacttctgtttccccggactgagtatcaatagactgctcgcgcggttgaaggagaaaacgtccgttatccggctagctacttcggaaaacctagtaacaccatgaaggttgcggagagcttcgttcagcactcccccagtgtagatcaggtcgatgagtcaccgcattccccacgggcgaccgtggcggtggctgcgttggcggcctgcccatggggtaacccatggggcgctctaatacggacatggtgtgaagagtctactgagctagttagtagtcctccggcccctgaatgcggctaatcccaactgcggagcacacgcccacaagccagcgggtagtgtgtcgtaatgggtaactctgcagcggaaccgactactttgggtgtccgtgtttccttttatctttatattggctgcttatggtgacaattaaagaattgttaccatatagctattggattggctatccggtgtgcaacagggcgattatttacctatttattggttttgtaccattaactttgaattctgtgaccacccttaattacatcttgacccttaacacagctaaacatgggttcgcaagtgtctacacagcgctccggttctcacgaaaactcaaactcagccactgagggttctaccataaactacaccaccattaattactacaaagactcctatgctgccacagcaggcaaacagagtctcaagcaggatccagacaagtttgcaaatcctgttaaagacatcttcactgaaatggcagcgccactgaagtccccatccgctgaggcatgtgggtacagtgatcgagtggcgcaattaactattggcaactccaccatcaccacgcaagaagcggctaacatcatagtcggttatggtgagtggccttcctactgctcagattctgacgctacagcagtggataaaccaacgcgcccggatgtttcagtgaacaggttttacacattggatactaaattgtgggagaaatcgtccaagggatggtactggaagttcccggatgtgttaactgaaactggggtttttgggcaaaatgcacaattccactacctctaccgatcagggttctgcatccacgtacagtgcaatgctagtaaattccatcaaggagcactcctagtcgccgtcctaccagagtatgtcattgggacagtggcaggcggtacagggacggaagatacccaccccccttacaagcagactcaacccggcgctgatggcttcgagttgcaacacccgtacgtgcttgatgctggcatcccaatatcacagttaacagtgtgcccacaccagtggatcaatttgaggaccaacaattgtgctacaataatagtgccatacattaacgcactgccttttgattctgccttgaatcattgcaactttggcctgttagttgtgcctattagcccactagactacgaccaaggagcgacgccagtaatccctataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggccgtcacgcaaggattccccaccgaactgaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccatcctggaggttaacaatgtgcccacgaatgccactagcttaatggagagactgcgcttcccggtttcggcacaagcagggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatgggccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtca
| 0 | 5 | 0.2 | 0 | 234 |
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] |
36 | 7,401 | 235 |
MF662692.1
|
Homo sapiens
|
Enterovirus A71
|
Enterovirus A
|
feces
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
MF662692.1 |Enterovirus A71 strain KW24/YN/CHN/2012, complete genome|set:MF662692|Enterovirus A71||2019-08-08T00:00:00Z|Institute of Medical Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Medical Genetics|China|Yu,L., Sun,H., Ma,S.||Enterovirus A|Enterovirus|complete|Picornaviridae|ssRNA(+)|7401|GenBank||||China|China||Homo sapiens|feces|2012-06-17||
|
tataactattacattggccccaatgtgttctgaattcgcaggtcttaggcaggccgtcacgcaaggattccccaccgaactgaaacctggcacaaatcaatttttaaccaccgatgatggcgtttcagcacctattctaccaaacttccaccccaccccgtgtatccacatacctggtgaagttaggaacttgctagagttatgccaggtggagaccatcctggaggttaacaatgtgcccacgaatgccactagcttaatggagagactgcgcttcccggtttcggcacaagcagggaagggtgagctgtgtgcggtgtttagagccgatcctgggcgaaatgggccatggcaatccaccttactgggtcagttgtgcgggtactacacccaatggtcaggatcattggaagtcaccttcatgtttactggatccttcatggctaccggcaagatgcttatagcctatacaccgccaggaggtcctctgcccaaggaccgggcgaccgccatgttgggcacgcacgttatctgggattttgggctgcaatcgtctgttacccttgtaataccatggatcagcaacactcattatagagcacatgcccgagatggagtgtttgactactacaccacagggttagtcagtatatggtatcagacgaattacgtggtcccaatcggtgcgcccaacacagcctatataatagcattagcggcagcccaaaagaacttcacaatgaaattgtgtaaggatgctagtgatatcctacagacgggcaccatccagggagatagggtggcagatgtaatagaaagctccataggagatagcgtgagcagagccctcactcacgctctaccagcacccacaggccagaacacacaggtgagcagccatcgactggatacaggcaaggttccagcactccaagctgctgaaattggagcatcatcaaatgctagtgatgagagcatgattgagacacgctgtgttcttaactcgcacagtacagctgagaccactcttgatagtttcttcagcagggcgggattagttggagaaatagacctccctcttgagggcacaactaacccaaatggttatgccaactgggacatagatataacaggttacgcgcaaatgcgtagaaaggtagagctattcacctacatgcgctttgatgcagagttcacctttgttgcgtgcacacccaccggggaagttgttccacaattgctccaatatatgtttgtgccacctggagcccctaagccagattcaagggaatcccttgcatggcaaaccgccactaacccctcagtttttgtcaagctgtcagaccctccagcgcaggtttcagtaccattcatgtcacccgcgagtgcttaccaatggttttatgacggatatcccacattcggagaacacaaacaggagaaagatcttgaatacggggcatgccctaacaacatgatgggcacgttctcagtgcggactgtggggacctccaagtctaagtaccctttagtagttaggatctacatgagaatgaagcacgtcagggcgtggataccccgcccgatgcgtaaccagaactatctattcaaagccaacccaaattatgctggcaactccattaagccaaccggtgccagtcgcacagcgatcaccacccttgggaaatttggacaacagtctggggctatttatgtgggtaattttagagtggtcaaccgacatcttgccactcacaatgattgggcaaatcttgtttgggaagacagttctcgcgacttgctcgtgtcatccaccaccgcccaaggttgtgacacgattgctcgttgcgattgccagacaggggtgtactactgtaactcgatgagaaaacattacccagtcagtttttcaaaacccagcttgatctatgtagaggctagcgagtattacccagccaggtaccaatcacatctcatgctcgcacagggtcactcagaacctggtgattgcggtggtatccttagatgccaacatggcgtcgtcggca
| 1 | 5 | 0.4 | 0 | 235 |
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] |
36 | 7,401 | 237 |
MF662692.1
|
Homo sapiens
|
Enterovirus A71
|
Enterovirus A
|
feces
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
MF662692.1 |Enterovirus A71 strain KW24/YN/CHN/2012, complete genome|set:MF662692|Enterovirus A71||2019-08-08T00:00:00Z|Institute of Medical Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Medical Genetics|China|Yu,L., Sun,H., Ma,S.||Enterovirus A|Enterovirus|complete|Picornaviridae|ssRNA(+)|7401|GenBank||||China|China||Homo sapiens|feces|2012-06-17||
|
tccaacttagagatagaaagtctaaagtcagatacagtgtggatacggtggtttcagaacttattagggaatatagcaataggtccgccattggcaacacaatcgaggctcttttccaaggtccacccaagttcaggccaattaggattagccttgaagaaaaaccagctccagacgctattagcgatctccttgctagcgtagatagtgaagaggtgcgccagtactgcagagagcaaggctggattattcctgaagcccccaccaatgtggagcggcaccttaacagagcggtgcttgttatgcaatctatcgccacagtagtggcggttgtctcattggtatatatcatctacaagctctttgcagggtttcagggtgcgtattctggtgctcctaagcaagtgcttaagaaacctgctcttcgcacagcaacagtgcagggcccgagccttgactttgctctctccctactgagaaggaatatcaggcaagtccaaacagaccaggggcatttcactatgttgggtgttagggatcgcttagcagtcctcccacgccactcacaacctggcaaagctatttggattgagcacaaactcgtgaatgtccttgatgcagttgaactggtggatgagcaaggagtcaacctggaattaaccctcatcactcttgacactaacgaaaagtttagggatatcaccaaattcatcccagaaaatattagcactgctagtgatgccaccctagtgatcaacacggagcacatgccatcaatgtttgtcccggtgggtgacgttgtgcagtatggctttttgaatctcagtggtaagcctacccatcgcaccatgatgtacaactttcctactaaagcaggacagtgtggaggagtggtgacatctgttgggaaggttgtcggtatccacattggtggcaatggcagacaaggtttttgcgcaggcctcaaaaggagttactttgctagtgaacaaggagagatccagtgggttaagcccaataaagaaactggaagactcaacatcaatggaccaacccgcaccaagttagaacctagtgtgttccatgacatcttcgagggaaacaaagagccagctgtcttgcacagtaaagacccccgacttgaggtagattttgaacaggccctgttctctaagtatgtgggaaacacactacatgagcctgacgagtacatcaaagaggcagcccttcattatgcaaaccaattaaagcaactagaaattaatacctctcagatgagcatggaggaggcctgctacggtactgagaatcttgaggctattgatcttcacactagtgcaggttacccctatagtgccctggggataaagaaaagagacatcttagaccctaccaccagggatgtgagtagaatgaagttctacatggacaagtatggtcttgatcttccttactccacttatgtcaaggatgagctgcgctcgattgacaaaattaagaaagggaagtcccgtctgatcgaagccagtagtctgaatgattcagtgtacctcagaatggctttcggacatttgtatgaggcctttcacgcaaatcctgggacgataactggatcagctgtggggtgcaatcctgatacattctggagcaagctgccaattttgctccctggttcactctttgcctttgactactcaggttatgatgccagccttagccctgtctggttcagagcattagaattggttcttagggagatagggtatagtgaggaggcaatttcactcattgagggaatcaaccacacacatcatgtgtatcgtaataagacctattgtgtgcttggtgggatgccctcaggctgttcgggaacatccattttcaactcaatgatcaataacattatcatcagagcactgctcataaaaacatttaagggcattgacttggatgaactcaacatggttgcttatggagacgatgtgctcgctagctatcccttcccaattgattgcttggaactagcaaagactggtaaggagtatggt
| 3 | 5 | 0.8 | 0 | 237 |
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] |
37 | 17,262 | 239 |
LC168750.1
|
Melopsittacus undulatus
|
Avian metaavulavirus 5
|
Metaavulavirus kunitachiense
|
Paramyxoviridae
|
Metaavulavirus
|
ssRNA(-)
|
LC168750.1 |Avian metaavulavirus 5 APMV-5/budgerigar/Japan/TI/75 viral cRNA, complete genome|set:LC168750|Avian metaavulavirus 5||2016-07-16T00:00:00Z|Graduate School of Veterinary medicine, Laboratory of Microbiology; Kita-18, Nishi-9, Kitaku, Sapporo, Hokkaido 060-0818|Japan|Hiono,T., Matsuno,K., Tuchiya,K., Lin,Z., Okamatsu,M., Sakoda,Y.||Metaavulavirus kunitachiense|Metaavulavirus|complete|Paramyxoviridae|ssRNA(-)|17262|GenBank|5|||Japan: Tokyo|Japan||Melopsittacus undulatus||1975||
|
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| 1 | 11 | 0.2 | 0 | 239 |
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] |
|
37 | 17,262 | 243 |
LC168750.1
|
Melopsittacus undulatus
|
Avian metaavulavirus 5
|
Metaavulavirus kunitachiense
|
Paramyxoviridae
|
Metaavulavirus
|
ssRNA(-)
|
LC168750.1 |Avian metaavulavirus 5 APMV-5/budgerigar/Japan/TI/75 viral cRNA, complete genome|set:LC168750|Avian metaavulavirus 5||2016-07-16T00:00:00Z|Graduate School of Veterinary medicine, Laboratory of Microbiology; Kita-18, Nishi-9, Kitaku, Sapporo, Hokkaido 060-0818|Japan|Hiono,T., Matsuno,K., Tuchiya,K., Lin,Z., Okamatsu,M., Sakoda,Y.||Metaavulavirus kunitachiense|Metaavulavirus|complete|Paramyxoviridae|ssRNA(-)|17262|GenBank|5|||Japan: Tokyo|Japan||Melopsittacus undulatus||1975||
|
actgggtgtcagttcattgggaaccccgaccttcacaacatctgctgcatcaatattatctgatagcctcaatcggaagagttgcagtatagtagcaacaactgagggttgtgacgtactctgcagtatagttacacaaacagaagaccaagattatgctgatcacactcctactccaatgatacatggtagattatggtttaatggcacatacacagagagatccttatcccagagtttattccttggaacatgggctgcgcaatatccggctgtaggatctggtataatgacacctgggcgagttatattccctttctatggaggtgtgatccctaactctcctctcttcttggatctcgaaagattcgctttattcacacataatggagacttagaatgcatgaacttaacacaatatcagaaagaagcaatttactctgcatataagcctcccaagattagaggatcactgtgggcacaaggcttcatagtatgttcagtaggagacatggggaattgctctcttaaagtgatcaatacaagcacagttatgatgggtgcagaaggtcggctacaattagttggggactccgttatgtactatcagagatcatcatcctggtggcctgtaggaattctttatcggttgagtcttgtagacatcatcgccggagatatacaggtcgtcataaacagtgaaccactccctctgagcaagttcccgcggccaacctggactccaggagtgtgtcaaaaaccaaatgtatgccctgcagtttgtgtaactggggtctatcaagacctttgggcaatttccgcaggggagacactatctgaaatgacattctttggaggatatttagaggcatccacccaacgaaaagatccatggataggcgttgctaatcaatatagttggttcatgagaagaagattattcaagacaagcactgaagctgcatattcgtcatcaacgtgttttaggaacactagactggatcgaaatttctgcctattagtctttgaattaactgataacttacttggagactggagaattgtccccctcttatttgaattaaccatcgtataatgtatgcaatgaagttagtaatctcggctaataacctgaatgaacgacttaagaatgataagactacaaaggtaagttatgaggtcatacgagctgttgatgcagaatttaattaataataaagggttaattcactggtatcataagtaattagcaacggcattaatctaattcattggttactaattaattacagttttagatgataattgtaagtgataagagaatatattaatgatcatagaactcatcaatattgtaattaaattacctattattgttgataacatggaatgattagaattgttatgccataagtggttataaattgctctcaatcgtagtaaggagttcggaatcagtagattaagaaaaaaagttaggggggaaaattatctcattagagaagaatttcccttctgttagtcaagaaattaagaccttgagtaatggaatcgcaagttcaatgggcacaagtaatccatccagaagctcaccttgactcaccaatcgttggcaacaaactgatctacttttggaagttatcaggtctaaaactaccagatgatctcttagagtatgctagcacagttactataaatgaacgtgcagttaaagattatgactactcaatatacaactctataacagctcaacgagatcgcttttgtcttggtctccaatctaaaggtctatttcttgacctcttagatcctattgtccatccgcgaactttgcccctcttgccaattattactctagaggaagcaaagcaattggctcacactgagaaaaagattatactgagagcggtcaagggtcactgttcccaaatagtggaattgttttccaccctttccaagaagttaataaatcgtgatgggctgttctcagggactgcagatagcccgtgggatcaatgcagacatccaacactgagtgatggttcaat
| 5 | 11 | 0.5 | 0 | 243 |
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] |
|
37 | 17,262 | 244 |
LC168750.1
|
Melopsittacus undulatus
|
Avian metaavulavirus 5
|
Metaavulavirus kunitachiense
|
Paramyxoviridae
|
Metaavulavirus
|
ssRNA(-)
|
LC168750.1 |Avian metaavulavirus 5 APMV-5/budgerigar/Japan/TI/75 viral cRNA, complete genome|set:LC168750|Avian metaavulavirus 5||2016-07-16T00:00:00Z|Graduate School of Veterinary medicine, Laboratory of Microbiology; Kita-18, Nishi-9, Kitaku, Sapporo, Hokkaido 060-0818|Japan|Hiono,T., Matsuno,K., Tuchiya,K., Lin,Z., Okamatsu,M., Sakoda,Y.||Metaavulavirus kunitachiense|Metaavulavirus|complete|Paramyxoviridae|ssRNA(-)|17262|GenBank|5|||Japan: Tokyo|Japan||Melopsittacus undulatus||1975||
|
taaaactaccagatgatctcttagagtatgctagcacagttactataaatgaacgtgcagttaaagattatgactactcaatatacaactctataacagctcaacgagatcgcttttgtcttggtctccaatctaaaggtctatttcttgacctcttagatcctattgtccatccgcgaactttgcccctcttgccaattattactctagaggaagcaaagcaattggctcacactgagaaaaagattatactgagagcggtcaagggtcactgttcccaaatagtggaattgttttccaccctttccaagaagttaataaatcgtgatgggctgttctcagggactgcagatagcccgtgggatcaatgcagacatccaacactgagtgatggttcaatatctatacttgaagatccaactatcttccttggtggttcatctcaacttcacattcactcctggtatttacttcgccagactcagagacacataattgaatcaaagaggactcaagttcgacaatcaacaagttacacgttttctggtgaaaatacacttgcagtggtaggcccagatgtcattatgattgctttgataaaagaacggaaattcacattgttgacatttgaaatggtacttatgtataccgacctagtagaaggacgagcaatgattctagcagttactcgtgtagaacctcatttaaatgacctctctgaaagattggtatccctatggtctctcatagacactatcgcatataccattggagagcaggtgtttaacataataggagcattagaaaatatggcatatgctgccgtccaattacatgatgctgatattgaccaatgtggtgaattcttctcctttaacttggcggagattggctcctgtcttgatcaatttttgccatctttgcagaaaaagcggattattgagactatttcgacactttactcagggttgactgtagatcagggagcagaaatgctttgtgtattgaggacttggggacatcctttgctgtatgcagagaaggctgcaaagaaagtaagagagtctatgtgtgcaccaaaactaataaattttgatatcgtccagcaagtactcagtttctttgtcactgacttaattaatggctttagaagggctcattcaggattgtggcctaaaatagtccctcagagtattacggaccccgttataaatcaactctggaaggattgctcagagataccatatcatatatctctgtctcattatcggagtattgctcagattgagtttgaaaagagcattgaatatgatctgatatcggatttgagtgtgttcctaaaagataaggcaatatgcagaccaagatcacaatggttggatatcttcaaaccaacattattaagctcgaataagaaggcaactgaccagagaagccagagaaataataggctccttcttgattttctatcatctgacaattttgatcctcatgaagagtttagttatgtcaccacaagaagctatttagaggaccaagaattttgtgcatcatactcgcttaaagagaaagaaatcaagattgacggacgaatctttgcaaaaatgactagaaaaatgagaaactgtcaagtactactagagagcttacttgcaactcatgtctgtgacttctttaaagagaatggagttgttcaagaacagttatcattgactaaatcactattggcaatgtcacagctagccccaagggtgtctgaatatcaagggaaaataatgcgatctagccatagattatgtattaataataaaactaaaggtgcaaaggcatattctcaattctcaagtccgaaatgtaaggcttctactcaggaaacacaactcaagagtggatcacctttctgtgtaaatgtagaagccccgagtgagccacaaaagaagaaaaccttgattgcaagcttcctaaccactgatctgcaaaagtattgccttaattggagatacccgaccattaaattgtttgccatgaaattaaaccagatcctaggg
| 6 | 11 | 0.6 | 0 | 244 |
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|
37 | 17,262 | 246 |
LC168750.1
|
Melopsittacus undulatus
|
Avian metaavulavirus 5
|
Metaavulavirus kunitachiense
|
Paramyxoviridae
|
Metaavulavirus
|
ssRNA(-)
|
LC168750.1 |Avian metaavulavirus 5 APMV-5/budgerigar/Japan/TI/75 viral cRNA, complete genome|set:LC168750|Avian metaavulavirus 5||2016-07-16T00:00:00Z|Graduate School of Veterinary medicine, Laboratory of Microbiology; Kita-18, Nishi-9, Kitaku, Sapporo, Hokkaido 060-0818|Japan|Hiono,T., Matsuno,K., Tuchiya,K., Lin,Z., Okamatsu,M., Sakoda,Y.||Metaavulavirus kunitachiense|Metaavulavirus|complete|Paramyxoviridae|ssRNA(-)|17262|GenBank|5|||Japan: Tokyo|Japan||Melopsittacus undulatus||1975||
|
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| 8 | 11 | 0.8 | 0 | 246 |
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|
38 | 29,136 | 248 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
gataaaaggtaatagctgcgtgctagagccaatctcccccccgtttcgtcttgtacgaatcacttttgaacgaacttaaaattgcgtcatacgtcacagtgggtttcgtcttgctgtgcgtaagttgcacacctattttagtgaagcttttagactaactacttcccttcttgcaagcaacgggtttcgtcctgtctgtgcgccctgtacaggttcggccgtgcagtgatggagggtgtgcctggtccatctaagcttagaagtatggtgactatcactcttaagtggatagatcccaatattatgcccagtgtcactggctgggatatgcctatgtgtgaggctttggagatcgttaaggacgagctccgtaagcctgaacctgacttggtgtttgtgcccaagtatttgtgccatacaccacttataggtaggaatcgcgttgttataaccgatgccacctaccgtaccactgttctcgggtggatccctatacgggagctcgcctatgatgagagtgagactagatatggtcgcagtggtacttatggtgttctgctacccatgcaggattccaagtatattatgggttctattgacatcgacatgcgtaagtacggtgccggtgctgggtctgataggcctgaaccaatgttgtgggatggatttgtagacctcccacgttcccagaagcagtatctggattatccagacaactgccgccccacaaagcctaaggctaaacgtggtggtaatgtttatatgtcggaccagtatggttttgacaacaatggtaacctggtaaaacctgttttggaattactgggtggcataaaaccagatctcactttggagaagcttacgctggcccttagtgagtatagaaactctgatgggtatgacctacctggtggctttgttcgagtcgccgttagtgtcatacgtaaacctgtgcctgttgtaaaacagacaattttcactgttcagggggtcgttgaacaacatgtggaagggttttattacccttattccactatgagtgtggtaaagcacaccaaacctcgatctgacaagccacttggcaagaccgttgagtctattatgctgagcttgtatggcactagtggctacagccctgctacacctgtggtgcgcttgcgctgtagttactgtgacttctatggctgggtccccccgcgggatatgggcacagttgtttgttcatgcggtgctgagtttcagctcacatcggcgtgtgtggatgcagaatccgctggtgcgataaagcctggttgtgtcatgctgttggacaggagtcccggcatgcgccttatacctggtaaccgcatatatgtggcctttggtggtgctatttggtcaccgataggcactgtgaacggcgtatctgtatgggtaccacgttcttattccgtagtagcaggcgatcactctggagccgtaggttcgtgtgatgtcactactatgaataaggagatcatggcctttatcattgagggctttaaaattgatgaagacacactggaaaaaccatcgtgtgcaacttttattgctaacatgcagtgtgatgagaagacaccagttgtgcacactgtagaaactatagtacagctttgccttgacaacaaggttgttttaggcaaccatcctttgccagatgacgagtttcatccagttattgttggtttgaattactacactcagcgtactttgtggtatgctgccctaaactccaagacctttgctgccatgcgggattatgtgtgcagggaagaggaaaggctgcgtgctttttgcggcagggcttttatacctgtaggtgctggtttgcatatggcttaccagacaggtaaggtgacattaacatctgcatatcacgtattggaggcggctctaacaaagactaaggatgcatttggtggagcagctgctgtggttgttgacttgctcaaacctgttatggattgggtgcttaacaagatgtccctggctaaaggtatatggcttcggtatgctgaggctattttggc
| 0 | 18 | 0.1 | 0 | 248 |
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|
38 | 29,136 | 249 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
ttgttttaggcaaccatcctttgccagatgacgagtttcatccagttattgttggtttgaattactacactcagcgtactttgtggtatgctgccctaaactccaagacctttgctgccatgcgggattatgtgtgcagggaagaggaaaggctgcgtgctttttgcggcagggcttttatacctgtaggtgctggtttgcatatggcttaccagacaggtaaggtgacattaacatctgcatatcacgtattggaggcggctctaacaaagactaaggatgcatttggtggagcagctgctgtggttgttgacttgctcaaacctgttatggattgggtgcttaacaagatgtccctggctaaaggtatatggcttcggtatgctgaggctattttggcactttttagggctcagtttacctttattgaaggtaaatttcattttgtgcgcgatactttgaatagttcgtgcggtgccctacgtgacctgctgtcagcgcttttgagcaagttactcacatctgcgcgctgggcaggttgtaaggtggaagctgtttacacaggaacgtaccactactttgctaagtttggtgttgtctctgagttgcagattcgcgctaaggcactgggcgttttattaacaccacgccagcagaagatggaggtggaggttttagaaggtaaggctgacgcccctgtggagcttacgagccttgagcttgaggaattacacggtacactggaagaggtttttggttattcagatcttggacttgttaagggtagcctggtaactatggctagtaaggtatttgtgcgcacggatgatggtgttctatatcgctatgtaaaatctggtggtgttttattaaaggccttcagacttcgtggcggtggaccacctaaagttacctttggtgatgaggaggttcgcactatacctaatactgtgactgtaaattttagttatgacatttgcgaaggactcaatgaaatccttggtaaagtcatggcgccttttcaagttgaagagggaactgatctcgctgatttagcttgtgtagtgcaacaggcagttcatgagaaattgtcagaattgctttcggagtgcccagctgaactacgtccgataaatttggaggagttttctgaggcagagtgctatgtgtacagtagggattacgagaaagtcctcgaatccgaaatgtacttttccctagaggatgtgactccagttgaagatgatgttagtgaagctgacatcatcgaggaggatgaagtagaccaaaccactgatagtgacgaccagtggctaggtgatgagtccccttccgaagacgttgaacagatcgctgctgatgaacaagagtcttctgatgaccctggtttgccgctagaatctgttgtcgttagtaaccagctggagggacccgctggttacaagcagcttacagagtgcgtttatataaaatgcgcagatattgtgcaagaagcacgtgcttataagtatgcagttttggttaatgctgctaacgtcaatttacatcatggcggtggcgttgcaggagcccttaatagagctacaggcaatgccatgcaaaaggagtctaatgactacactagagctaatggccctcttcaacctggtgggcatgttttactaggcgctcatggccttgcgaatacaggtatactgcacgtcgtaggaccggataagcgcctaggtcaggacattaagttgcttgatagtgtgtatcaggcatatgcagggtttgatactgtgcttacgcctttggtgtctgcaggtatctttggctttacggtggaggagtctctacttagccttgtcaacaatgtaagttgtaagacttacattgttgtttatgataggcagctatacgagcgggcattagccgtagatgtgaagcccgctcctgcgcctgatacatcaaccgccgcgctagattgggctgcggctgtggagttgcaagagtctgatgcgcctgttgtgacgcaacaggcgtgtgatgttgttagtgacactgat
| 1 | 18 | 0.1 | 0 | 249 |
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|
38 | 29,136 | 250 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
tgggcatgttttactaggcgctcatggccttgcgaatacaggtatactgcacgtcgtaggaccggataagcgcctaggtcaggacattaagttgcttgatagtgtgtatcaggcatatgcagggtttgatactgtgcttacgcctttggtgtctgcaggtatctttggctttacggtggaggagtctctacttagccttgtcaacaatgtaagttgtaagacttacattgttgtttatgataggcagctatacgagcgggcattagccgtagatgtgaagcccgctcctgcgcctgatacatcaaccgccgcgctagattgggctgcggctgtggagttgcaagagtctgatgcgcctgttgtgacgcaacaggcgtgtgatgttgttagtgacactgatgtgacagaagatgtcacagcgtgcatgagagacttgcttaggcgtgttgtacggcaagtaaagcgtgatacgcgttcattggctttaccagttgcggctactgaggttgagcgccctaaagaagtgcctgcttcggattccgctattttaaaggagaccacgccactagttgatgtggtgtgtttatctttttctgctatgttacagcgcggtaaagcacagggcttgcttacaccagttgtgatagattaccctgcctttaataaggtccttaagcgttatgaacctaaggagggtttttatacctttgatggtcaagatttttatggttacagtcgtgatacacctattgaggatgttagcaaggctttaaatgctttgggtaggtcgttgctcatgattccttttggttttatagtaaacggccaatccttagctgtttctgccgtcagtatgcgtaaacttactgtaccacatacggtagtgcttccttctgaatcgtgtgttccattgtatagagcctattttaatggttcatttaatggtgacaccaccgctgttcaggattttgtcgttgatattttagtcaatggcgtacagacttgggatgttatacaaacaacctgtacagttgatcgtcgtgtttacaaaacagtttgtaagcgcggtgatacttttatgtgctatgatgacacaaatttgtatgccatcacaggtaatgtagtgctaaagttcgctactgtgctaaaggcgcgtgcttacttgagtacacagcctaaagtccctgaaaccctaattaaggtgttaactacagtggatggtattaattataatactgttttagtgtcgcgtgagcagacataccgagcacagattggtacagtgttttgtgacggtagagattattcggatagacgtcccactattgctgacgaaggcgtacatttgttcaaacaggacaatttttctatggaagagttgcaatccatgcgcgaatattatggtgtcgaggaccctaatattgtagctcgcgccatgagtgtaaggaagatcgtccagcagtggccatatgcggttattgatgggcgggttctattagcacaaagggattctaattgctatgtcaatgtggctctgtctttactgcaggatgtggacgtcacttttaccaccccgtgggtggcacgtgcatattcagcacttaagggtggcaacccgctgcccatggcagaggtacttatagcacttagtaaggctacaccaggagagtgtgatgacgctcatatggtgttgtctactgtattaaaccacggtactgttgatgcacgacgcgttatgcagactgtgtgtgaagtttgtggtgtgagtcaatttgtgtttactggcacagatgcctgcacgttttatggttcagtcatgctagatgatttgtatgaacctgttagtattgtttgtgcatgtggacgttcagccatacggtatgtgttggaacagaggtcaccttggttacttatgtctcacacacctacacaggtacctttggatactagtggcaattggcaggctgctattgtttttaggggaccagtgacagcgggacattatatgtatgctgttaacggtacattgatttccgtttttgacgcta
| 2 | 18 | 0.2 | 0 | 250 |
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] |
|
38 | 29,136 | 251 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
agtaaggctacaccaggagagtgtgatgacgctcatatggtgttgtctactgtattaaaccacggtactgttgatgcacgacgcgttatgcagactgtgtgtgaagtttgtggtgtgagtcaatttgtgtttactggcacagatgcctgcacgttttatggttcagtcatgctagatgatttgtatgaacctgttagtattgtttgtgcatgtggacgttcagccatacggtatgtgttggaacagaggtcaccttggttacttatgtctcacacacctacacaggtacctttggatactagtggcaattggcaggctgctattgtttttaggggaccagtgacagcgggacattatatgtatgctgttaacggtacattgatttccgtttttgacgctaatacgcgtaagcgtactagcgacttaaagcttccagctacggatattttgtacggtcctaccagctttactagtgctagtaaggttgagacctattaccttgatggtgtgaagcgtactactatagatcctgatcttagtaaatacgtgaagcgtggtgactactactttacagctgcacccctagatgtggtggcagcccctaagttggtcacaccatatgatgggttttacttgtcatcgtgccaaaatgcaaagttggccgatgagtttaataaggccattaatgctacaaagcagggccctatgaagttgcttactgtgtacccaaacacagctggcgatgttatagctgtggttgatgacaatgtggctgttcacccgtatggttcactccatatgggtaagcctgtattgtttgttaataagcctaacacttggaagaagttagtgccgttgttgtcttcgcttgtagtggagacgacgaataaatacactgtgctacctgtggatcctttaccaaaaggggaaagtacgactaaagcggtcagtgtgaaagccactgtaccgctttatggtttaaaatcttctatggttttggatggtacaacatacgtacctggtaaaaagggtgaccttttgtgtttgagggaattaactctcactgatttgcagactttttatgtggagggtgtccaaccttttgtcatattaaaggcttctcatttaagtaaagttttaggtttgcgtgtaagtgatactaagttacacgtaaatcgtttgagtgctggccttgtctatgcgtatgcagcgacgaggtgtacagcacgtgttacaaagacagttcttggtgatgttgttaccagggttgtcaggaagacggcagacttcgtgcggggtactaatcctggcgcgaagtgtgtgggtttattgtgtttgttttaccagttacttgtgcgttgctggttagtagttacaaaaccacctatatttaaagtgtcaggtatagtggcttataatacaggatgtggtgttacatcgtgtgtcttaaattatttgaggcaacggtgtggtaacatatcgtggacacgcctaatcaaatggcttaggtacgtgttatatgtatggtttgtatggacgtgtttgactatatgtggcgtatggttatcagaaccatatgcaccagattggttgaatagagtccggtcattcattggtttagttatgccatgtgactatgtccttgttaatgagacaggcactggttggttacatcatttgtgtatggcgggtatggataatttagactatccggccctccgtatgcaacagcacaggtatggtagtccttatgactatacatatatacttatgttattggaagctttccttgcctaccttttgtacacaccggctttgccaatagttggtgtgttggcagtactacaccttgttgtgttatacttgcctatacccttgggtaatagttggctggtagtgtttctttattatttaataaggttggtaccttttactagtatgttgcgcatgtacatagttatggcttttttatggttgtgctacaaagggtttttgcacgttagatacggatgcaataatgtggcctgtctaatgtgttataaaaagaa
| 3 | 18 | 0.2 | 0 | 251 |
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|
38 | 29,136 | 252 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
atgagacaggcactggttggttacatcatttgtgtatggcgggtatggataatttagactatccggccctccgtatgcaacagcacaggtatggtagtccttatgactatacatatatacttatgttattggaagctttccttgcctaccttttgtacacaccggctttgccaatagttggtgtgttggcagtactacaccttgttgtgttatacttgcctatacccttgggtaatagttggctggtagtgtttctttattatttaataaggttggtaccttttactagtatgttgcgcatgtacatagttatggcttttttatggttgtgctacaaagggtttttgcacgttagatacggatgcaataatgtggcctgtctaatgtgttataaaaagaacgttgctagacgtatagagtgttctacggttgttaatggcgtaaagcgtatgttttacgtcaatgccaatggaggtacacatttttgtactaaacataattggaattgtgtgtcgtgtgacacctacactgtggatagcactttcatttcgcggcaagtagctttggatttgagtgctcaatttaaaagacctatattgcctacagatgaagcctattatgaggttacttctgttgaggtacgtaatggctatgtgtattgttattttgacagtgatgggcagcgcagttatgagcgtttccctatggatgcgtttactaacgttagtaaattgcattatgcagagctaaaaggtgcggcgccagcttttaatgttttggtgtttgacgcaactaaccgtatagaagagaatgctgttaaggcagctgccatttactttgcacaattagcttgtaaacctattttattggttgacaagcgtatggttggtgtcgtcggtgatgatgctaccattgccaaggctatgtttgaggcttatgcacagaattatcttcttaagtacaacattgctatggataaagtcaagcacttgtatagtactgctttgcaacaaatatcctcgggtatgactgttgaggctgtacttaaagtgtttgttggatccacacgctcagaggcaaaagatttggaatctgatgttgacactaatgatttggtgtcttgcatgagattgtgtcaccaagagggttgggactggaccactgattcgtggaataaccttgtgccaacctacattaaacaggatacactgagcacactagaagtgggccagtttatgactgcaaatgctcggtatgttaatgcgaacgtagctaagggggcagccgttaatttagtgtggcggtatgcggactttgttaagttaagtgagtctgtgcggcggcaacttcgcgttgctgcacgtaagactggtcttaatttattagttacaacgtccagccttaaagcggatgtgccttgtatggtgaccccttttaagattataggtggtcacaggcgtttagtaccatggaagcgtgttttattacacgtttttatgttgattgttgtattaaaccctcagtggttcacaccttggtatataatgcggcctattaattataatgtagtggatttccgtgttatagacaatgctgtaataagagatataactcctgcagatcagtgctttgctaacaagtttagtacttttgatgcctggtattctaatagatatggtagttatgttaattcacgtagttgtcctatggttgttggtgttgttagcgacgttgtaggtaatcttgttcctggtttaccggcaagatttttacgcgttggtgctacactattacctttggtaaattacgggttgggtgctgtaggtagtgtgtgttacacgcctcaccactctatcagctacgatgtttttgaaaccagtgcatgtgtgttagcagccacttgtactcttttttctagtgctaatggtgaacttatgccttattgtgcagactcagcgttaatacagaatgctagtcgttatgacacactgaacccacatgtgatgtatcctttttatgaacaatttgggtacatacgttttcctgaa
| 4 | 18 | 0.3 | 0 | 252 |
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|
38 | 29,136 | 253 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
ttttgatgcctggtattctaatagatatggtagttatgttaattcacgtagttgtcctatggttgttggtgttgttagcgacgttgtaggtaatcttgttcctggtttaccggcaagatttttacgcgttggtgctacactattacctttggtaaattacgggttgggtgctgtaggtagtgtgtgttacacgcctcaccactctatcagctacgatgtttttgaaaccagtgcatgtgtgttagcagccacttgtactcttttttctagtgctaatggtgaacttatgccttattgtgcagactcagcgttaatacagaatgctagtcgttatgacacactgaacccacatgtgatgtatcctttttatgaacaatttgggtacatacgttttcctgaagttatttccgccggcgtgcatatagtcaagactatggctatggagtattgtaaagtgggccgttgtgacgtatcggaagctgggttgtgcatgtcgttacaacctcggtgggtcgttaacaatgcctactttagacaacaaccaggtgtttactgtggtacaggcacactggatttatttttaaatatgctactgccaatatttacaccggtgggtgctgttgatataacaacatctatattgatgggtgccttgctggctgtagtagtttctatgtcgctttattatttgttaagatttaggcgtgcatttggtgattattcaggagtcatttttactaatattttggcttttgttctgaatgttatagttttatgcttagagggtccatatcctatgctacccagtatatatgctatggcatttttatatgcaacttgttacttcggtagtgatattgcatgtatgatgcatgtttcctttttgataatgtttgtaggcgtggtccccttatgggttacagcgctatacatagttgtggtgttgagcaggcatatattatggtttaccagtttgtgcacgaaacgtactgtacaagtgggtgaccttgcatttcactcatttcaagacgctgctttgcaaacttttatgttggacaaggaggtgtttttacggttgaagcgtgagatatcctcagatgcttatgctaagtatttggccatgtataacaagtacaagtactatagcgggcctatggacactgctgcgtatagagaggctgcatgttctcatttagtaatggctttagaaaagtattctaatggtggtggtgatactatatatcaaccacctcgctgtagtgtagcatcagctgcattacaggcgggtttggcacgtatggcgcacccatcggggttagtagaaccatgcattgtcaaagtgagttatgggtctatgacacttaatggtatatggcttgataactttgttatatgtcctagacatgtaatgtgttctagggatgagttgacaaatcctgattatgctcgtttatctatgcgggcagctaattatgattttcatgtagctcaaaatggccacaacatccgggttgtaggacatgttatggagggttcgctgttaaagctaaccgttgatgttaacaaccctaagacaccatcttactcgtttataagggtaagtacaggtcaggctatgagtttgctagcatgttatgatggcgttcctacaggtgtttacacatgtacgttaagatctagtggcacactaagagcttcatttttatgtggctcttgtggtagtcctggtttcgtaatgaatggcaaagaagtgcagttctgctatttgcatcagttggagttacctaatggtactcacactggtacagatttttcaggtgtgttttatggaccttttgaggataaacaagttcctcaattggctgcacctgataatactataacagttaacgttttggcatggctctatgcggctgtgctaagcggtgagaattggtttttgacaaaatccagcatttctccggctgaatttaataattgtgctattaagtacatgtgtcagtcggtaactagtgagagtttgcaagttttacaaccacttgcggcta
| 5 | 18 | 0.3 | 0 | 253 |
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|
38 | 29,136 | 254 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
acaggtgtttacacatgtacgttaagatctagtggcacactaagagcttcatttttatgtggctcttgtggtagtcctggtttcgtaatgaatggcaaagaagtgcagttctgctatttgcatcagttggagttacctaatggtactcacactggtacagatttttcaggtgtgttttatggaccttttgaggataaacaagttcctcaattggctgcacctgataatactataacagttaacgttttggcatggctctatgcggctgtgctaagcggtgagaattggtttttgacaaaatccagcatttctccggctgaatttaataattgtgctattaagtacatgtgtcagtcggtaactagtgagagtttgcaagttttacaaccacttgcggctaaaacaggtgtgtcagttgaacgcatgctttcagctttgaaggttttgctctcggctggtttttgtggacgtactataatgggctcatgtgcgctagaggatgaacatacaccttatgatatagggcgccaaatgctgggtgttaaattgcagggtaagtttcaatctgcttgtaagtggacactacagtggttttctatagtttttattcttactgtacttattttgctgcagttggcgcaatggacctttgtaggggcattgccattaagtttactattaccgcttatagggtttttggcttgctgtgtaggggctgtgtctttgcttgtaaagcataaacatgcgtaccttactgtgtacttacttcctgtagcaatggttacagcttattataatttccagtacacgccagaaggtgtacaaggttatttacttagtgtgtacaactacgttaacccaggtcgtattgacgttgttggtacagacatagtaactatgcttatcataagtgtcgcgtgcacattgttaagcgtgcgcatggttaggaccgatgcttacagtcgtgtgtggtacgtctgtactgcaattggttggttgtataattgctggaccggtagccctgatactgtagctattagttaccttacatttatggtctcagtttttactaattacacaggtgtagcctgtgtgtctttgtatgcagcgcaacttatgacatgggttcttatatacttggacccggccattttattgttgtatggtaagtttagatgcgtgttggtttgctatttgatagttggctacttttgcacatgttattttggtgtgtttaaccttattaataggttatttagatgcacccttggcaattatgagtatgtcgttagttctcaggaactacgatatatgaattcacatggcctactgccgcctactacatcatggcaggcgcttatgttaaatatgaagttggcaggtataggaggcattcctatttataaggtgtctactatacagtcaaatatgacagatttaaaatgcacgagtgttgtcttgctatctgtgttgcaacaattacgtgttgaatccagtagtaagttgtgggcactatgtgttaaattgcataatgagatattagcatctagctctcctactgaggcgtttgaagcttttgtttcattattgtcagtattgttatcattgccaggtgctataaacttggatgagttgtgtggtagcatcctggagaacaattctgttttgcaggctgttgctagtgagtttagtaatttatcctcttatgtggattatgaaaatgctcaaaaagcttatgacacagctgttgccacaggtgcaccggcgtccactgtcaatgctttaaagaaagctatgaatatagctaagagtgttttggataaagatgtagccacaactcgtaaattagagcgtatgtccgagttggctatgactgctatgtataagcaggctagagcagaagatcggcgctctaaggttacggctgccatgcaaactatgttgtttaatatgatacggcgtctagatagtgacgctcttagtaacatattgaacaatgcacgcaatggtgttgttccacttggtgtcatacctaggacatcagctaa
| 6 | 18 | 0.4 | 0 | 254 |
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|
38 | 29,136 | 257 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
agcattcgacttgttgtaatgcgtctgagcggttttatagacttgctaatgaatgtgcacaggttttgagtgagatggtcctttgtgggggcggtttctatgtaaaacctggtggtactagtagtggagactcaaccactgcatatgctaatagtgtttttaatatttgtcaggctgttagtgctaaccttaatacctttttatctatagatggtaataagatttacactacctatgtgcaagaactacagcgtcggttatacatgggtatataccgtagtaatactgtagataatgagttagtgttggactattataactatttgcgtaagcattttagtatgatgatccttagtgatgatggtgttgtctgttataattcggactacgcccaaaagggttatgtagctgatatacagggctttaaggagctcttgtattttcagaacaatgtgttcatgtctgaagctaagtgttgggtggaacctgatataactaaaggtcctcatgaattctgttcgcagcatactatgcttgtggacatgaaaggcgagcaagtttacttgccatacccagatccatctcgtatattaggagctggttgttttgtggatgacttgctgaagactgatggtactcttatgatggaacgatatgtgtctcttgccattgatgcatatccgcttacgaagcattccgaccctgagtaccaaaatgtgttctggtgttatctgcaatatataaagaagttacatgaggagttaacaggtcacttactagacacttatagtgtcatgttggctagtgataacgcttctaagtactgggaggtggatttctatgaaaatatgtacatggagtccgccacgttacagagcgtaggtacgtgtgtcgtgtgtaattcacaaacatctttgcgttgtggtggttgcatacgtaggccgttcctgtgctgtaaatgctgttacgaccatgtggtgtccactacacataagttagtgttatctgtgacgccatatgtttgtaatcatcctagttgtgatgttgcagatgtcacccaattgtacttgggtggcatgtcttattattgtagagaacataggccgccgatatcattccctttatgtgcgaatggtcaggtgtttggtctctataagaatatttgtactggtagtccagatgtggccgactttaatagtctagccacttgtgactggagtaacagtaaggattatgtcttagccaatacagccactgagcgcttgaaacttttcgccgctgagacactgcgcgctaccgaagaaaatgctaaacaggcatatgcttctgcagtagttaaggaggttcttagcgatagggaacttgttttatcctgggagacaggcaaaatgcgcccgcccctaaatcggaattatgtgttcactgggtttcacattactaagaatagtaaggtgcaattaggtgagtacatatttgagaaaggtgactatggtgatgtagtcaactaccgttccagtacgacatataaattgcaagtcggtgattacttcgtgcttacatcgcattcggtgcaaccacttagttcacccaccttacttccacaggagcgttatactaagctcgtaggtttgtacccagctatgaatgtaccggagagttttgttagtaatgtcgtacattaccaacgtgttggtatggcgcgttacaccacggtccaaggcccaccgggtacgggtaagagccacttgtccatagggcttgcgctttattacccttctgcaaagattgtctacacagcatgtagtcatgctgctgttgacgcattgtgtgagaaggcccataagaacttacctattaataggtgtagtcgtattgtgcctgctaaagcgcgtgttgagtgcttttctaagtttaaagtaaacgatgtaagcgcccaatacgtgttttctacgataaatgctttacctgaaacaacagcagatatccttgttgtagacgaagttagtatgtgtactaactatgatttaagtatgattaatgccagggtt
| 9 | 18 | 0.6 | 0 | 257 |
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] |
|
38 | 29,136 | 258 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
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| 10 | 18 | 0.6 | 0 | 258 |
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|
38 | 29,136 | 259 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
tgctttatgtgtcctaagcgtgcaaccctatttagtagtgtctatggggcatattcatgctggagtcaccatagacacataggaggtgcagactttgtgtataacccatttttggtggatgtacagcaatggggttatgtaggtaacctacaggtaaaccatgataatgtctgcgatgtacataagggtgcacatgtggctagctgcgatgccataatgactagatgtttggctatccatgactgtttttgtggtgaagtcaattgggatgtggaataccctattatagctaatgagttagctattaataaggcatgtcgtagtgttcaacgcgtcgtgttgcgagcggcggttaaggcactacatatagatactatatatgatattggcaaccctaaggctattaaagtttatggtgtcaatgtaagtaattggaaattctacgacacaaagcctgtcgtagaaggtgttaagcagctacattatgtatatgatgtatataaagaccagtttaaagatgggcttgctatgttttggaattgtaatgtggattgttatccacacaacgccctggtctgtaggtttgacacacgtgtgttgtcaaaattgaacttagcagggtgcaatggcggctcgttttatgtgaaccaacatgcatttcatactgatgcatttaataaaaatgcttttattaatttgaagcccctccctttcttttactattcagatacagcatgtgagaatgccactggtttgtctactaattatgtcagtgaagtagattatgtaccacttaagtctaatgtttgtataacacgttgtaacttaggaggtgcagtttgtaaaaagcacgctgacgagtacagaatttttctggaaagttataatactatggtaagtgctggtttcaccttgtgggtggataaaacttttgacatttttaacttgtggtccacgtttgtaaagttacagtctttggagaatgtggcctacaatgtgttaaagtccgggcactttacaccagtagcaggtgaattacctgtagctatttttaatgaccgcctctatataagggaagacggtgttgataaattgttatttactaataatacatgcttgcccactaatgtagcctttgagctatgggcaaagcgttcagtaaatgtagtaccagaggttaagttattacgtaacttaggtgttacgtgtacatataacttagtcatatgggactatgaacataatgcgcctttagtgccaaatactgttggcgtttgtacttacactgatttaataaatttggatgaccaggttgtgttagttgacggcaggcagctagatgcttatagcaagttttgccagttgaagaatgccgtctatttctcaccaactaagcctaaatgcattagtgccaggggccctatgcacgcgtctataaatggcgtagtcgtagaagcgccagacaaaggtacagcgttttggtatgcggtgagaaaggatggtgcattcgtgcagccagctgatggttatttcacacagtctcgtacactggacaattttcaaccgcgcactcaattagagttagatttccttgatcttgatgagtcatgtttccttgatagatacgacttgcatgatctaggtttggagcatatagcctatggtcagtttgaaggcaccataggtggtttacatttgttattgggtgcagtgcgccgtaggcgcactgcaaacttggttatggagacggtgttaggtactgacactgtcacctcttatgctgtcatagaccagccgactgctgctaataagcaagtatgtagtgtctttgacatggtcttggatgattttgttgccttaattaagtcacaagatagaacagttgttagtaaggtggttcagtgttgccttgattttaagatgtttagattcatgctgtggtgtaaagatggcaagatagctaccttttatcctcagttgcaggctaagcaggattggaagccgggttatagtatgccggctttgtataaagtgcaaaatgcagtgct
| 11 | 18 | 0.7 | 0 | 259 |
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|
38 | 29,136 | 261 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
tagtctgtagtaacgcaaccctttgtgcgtaccctgcatttaatcgttggggtcctgcgagtagcatatacgcaagtgatgcttttgtagaccatggtaattcctgttttgtaaacaacagttttgatatacctattaatacgtctcgtattaatttggcttttaggttcttggatggtaacctattgctgtaccattctaggtggcttccaggttctgggcttaatttagccacagattaccccctacacttctttatgagtgtgggtgttggcgctaatttgcctaatgcacagtttttccaatccgtagtccgctataaccggggtgttgatgaagcgcgatgtcatacttttcagaataatttgtatatagcacctttgagtttacgtgaagttttagtgtcttacagtgatagtggcttgccacttaaggtggctgattgtgcggccgatgcaggtgatgagctattttgtgttactggctcatttgaacctgccattggtgtgtaccctcttagtaggtaccgtgctcaggttagtgattatgtgcacattacacagcaatcacaggcctgcaaactgccttacgctgacattgtatcaccacctcagcctattgtctggcgtcgatatacagtgtctagttgctcatttgactttgagagcatagttaataatttacctacctatgatctcaagtgctatggtgtatcacccgcgcggcttgcacaaatgtgctatgcgggtgttactctggacgttatgcgcataaacaagacgcattatagcaatttaattggtaatgtgcctgatttatttacaaagtataattatgccctgcccaccaatttttatggttgtgttcacgcatattatattaatgttactgatggccgctatgctttagcgactcattacccggccactgtcattacaccaggaggtagacagccttataatagctatgtggctactgttttgaatacagttaataactggtgtaccagagctaattgttttggtcttgtagttataggattgaagcctgcatcaggtaggcagttagtctgccctaaggctaatgatactgaagttatagtgcagcaatgtgttaagtataatttgtacggttacacaggtaccggcgttttaagcccgtctaatttaaccataccagatggtaagttgtttgtggctaataacgcaggtaatattgttgctgttaatgcttctggcaccgtatatggcatttcatcttgcgtgtcagttcctgtctcagtaggatataacccctcatttgagcaggcgctactatttaatggtttagcgtgttcagagagagcagttgctgttaatatgccggcgtcaacttattggctatcggtgtctagaaacgcagccccacctgatggtggtgtgtttgacacaccttctggttgtgtttataatgtacgcaatttaactaccatggtagttaattcgtgtgatatgcctattggcaacagcctttgtttaactaatgtaacttatgctaatagggctacagatagtttacctaggttgagtttagtcacttatgatccaacggctgctaatgctgtccagttgctcacaccagtttactgggttagtatacccactaattttactctggctgctacttctgagtatatacaaactagctcaccaaagatcaatgtagattgcgcgaagtatttatgtggcgactctgataggtgtatgaatgtgttgctgcagtatggcacattttgtgatgacgttaataaggcgctggccgaggtcagtgctacaattgacgcatccgttgtgtcattgatgtcagaactcacatcggacgttgtacgtaatgaaaacatgcagtttgacactacatacaactttacctcacttatgggttgtttgggatcagattgtgattctaaaatgtacaggtccgctttatcggacttgttgtataataaggtcaaggtcacggaccctggctttatgcagtcctatcagaagtgcatttctcagtggggtggt
| 13 | 18 | 0.8 | 0 | 261 |
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|
38 | 29,136 | 262 |
EF065515.1
|
Chiroptera
|
Bat coronavirus HKU9-3
|
Rousettus bat coronavirus HKU9
|
Coronaviridae
|
Betacoronavirus
|
ssRNA(+)
|
EF065515.1 |Bat coronavirus HKU9-3, complete genome|set:EF065515|Bat coronavirus HKU9-3||2007-02-07T00:00:00Z|The University of Hong Kong, Microbiology|China|Woo,P.C., Wang,M., Lau,S.K., Xu,H., Poon,R.W., Guo,R., Wong,B.H., Gao,K., Tsoi,H.W., Huang,Y., Li,K.S., Lam,C.S., Chan,K.H., Zheng,B.J., Yuen,K.Y., Woo,P.C.Y., Lau,S.K.P., Xu,H.F., Poon,R.W.S., Guo,R.T., Wong,B.H.L., Li,K.S.M.||Rousettus bat coronavirus HKU9|Betacoronavirus|complete|Coronaviridae|ssRNA(+)|29136|GenBank|||1|China: Guangdong province|China||Chiroptera||||
|
tactctggctgctacttctgagtatatacaaactagctcaccaaagatcaatgtagattgcgcgaagtatttatgtggcgactctgataggtgtatgaatgtgttgctgcagtatggcacattttgtgatgacgttaataaggcgctggccgaggtcagtgctacaattgacgcatccgttgtgtcattgatgtcagaactcacatcggacgttgtacgtaatgaaaacatgcagtttgacactacatacaactttacctcacttatgggttgtttgggatcagattgtgattctaaaatgtacaggtccgctttatcggacttgttgtataataaggtcaaggtcacggaccctggctttatgcagtcctatcagaagtgcatttctcagtggggtggtgaaattagagaccttatgtgtactcaaacctttaatggtattgctgttttaccacctattgtttctccaggcatgcaagccttgtacacatcattacttgtgggtgcggtagcatctgcaggttatacatttggcattacttctgtcggggttgtgccttttgcgacgcaattgcaatttagattaaatggcataggcgtcactacgcaggtgcttgtagagaatcagaaacttattgctaattcttttaacaatgcccttactaatatacagaagggttttgatgccactaatgaggcgattagtaagatgcagcttgttattaaccagcatgctcagcaattgcagactttggtgaaccagttaggtaattcatttggtgctatatctgcttctattaatgaaatatttagtcgtttagatggtttagaggctgatgctcaagtggataggcttattaatggacgcactgttgtgcttaatacttatgtaactcagttgcttattaaagctacagaagtgcgtagtcaggccctgttagctaagcagaaaattagtgagtgcgttaaagcacaatctcttcgtaatgatttctgtggcaatggcacacatgttttgtctataccacagttagctcctaatggtattttgtttttgcattatacctataaaccgacggcttttgctgttgtgcaaactgctgctggtctgtgttataatggcacagggtatgcacctgtaggtggcatgtttgtgttacctaatggtacgcaggcctggcactttactaaaatgaatttttataatcctgttagtattacagttgagaacacgcaggttttatctacatgtggcttgaattattcacatgttaactacactgtggtgaacccgtcggtacctagtgattttgattttgaggaagagtttaataagtggtataaaaaccatacctctatatttaataatacattcgaccctagtgcttttaatttttctatggtcgatgtaaataagcaactggctactcttacagatgttgttcagcagctaaacaagtcgtatattgatttgaagcaattaaatgtttatgaacagaccattaaatggccgtggtatatatggctcgctatgatagcgggccttgttggcttagcccttgcagtggtcatgcttttatgtatgactaactgttgttcatgcttcaaaggcatgtgttcatgcaagcagtgccattatgatgaggtagatgatgtatatcctgctgttcgtgtatataataaacgaacagcatgaatctataccgtttggtagcggatgcgctttacgcgacacctgctatatcaaccgtggacatacaacccaccgctgaagtggtacgtggtgttaaggactatgtacatctaacaatgacggtggctcttattttgtatgctactgtcactcttatattgtggtttctcggtagatccagatatccatacttacgtgtattgtctcatatagcgctatgcttattacaagcgggcgtgttggtatggctcagcttctcgagtaacaaaatcattagtatttgtgctcagggcattgtggtcgtttgcgcatttatttgtgtttttgagcgcttagccatggccattaaattacg
| 14 | 18 | 0.8 | 0 | 262 |
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] |
|
41 | 7,227 | 266 |
ON226515.1
|
Sus scrofa
|
Swine hepatitis E virus
|
Paslahepevirus balayani
|
Hepeviridae
|
Paslahepevirus
|
ssRNA(+)
|
ON226515.1 |Swine hepatitis E virus isolate SMU/HP8/2021, complete genome||Swine hepatitis E virus||2023-02-07T00:00:00Z|College of Animal & Veterinary Sciences, Southwest Minzu University|China|Zhang,B., Song,X.|SMU/HP8/2021|Paslahepevirus balayani|Paslahepevirus|complete|Hepeviridae|ssRNA(+)|7227|GenBank||||China|China||Sus scrofa||2021-05||
|
ttcgtatgtgggtgacgccatggaggcccaccagttcataaaggctcctggcgtcactactgctattgagcaggcagctctagcagcggccaattctgccttggcgaatgctgtggtggttcggccctttttatcccgccaacagacagagatactaattaacttgatgcaaccccggcagcttgttttccggcctgaggttctgtggaatcaccccatccaacgtgtgatccacaatgagctagagcagtactgtcgagctcgtgctggccgctgcctcgaagtgggtgcccacccacgttcaattaatgacaaccctaatgttttgcatcgttgttttcttaaacctgtcggccgtgatgttcagcggtggtataccgcccccacccgtggccccgcggcaaactgccgccggtctgctcttcgtgggctcccacctgctgaccgtacatactgctttgacggcttctctggctgcacttttgcggccgagacaggcatcgccctttactcactgcatgatttgtggcccgctgatgttgctgaggcgatggcccgccatgggatgactcggctctatgcggccctccatctcccccctgaagtgctactaccccctggcacataccacaccacttcatatcttttaattcatgatggggaccgtgcagtgattacatatgagggggactccagtgctgggtataatcatgatgtgtctattttgcgggcatggatccgtaccaccaaagtcaccggtaaccacccactggtgattgagcgggtccgggccgtggggtgtcattttgtgcttctacttacagccgctcccgaaccgtcaccgatgccctatgtcccatacccacgctcaactgaggtttatgtccggtctatcttcggccctggaggctcgccatctctctttccgtccgcctgctctactaagtcaacatttcatgccgtccctgtgcacatatgggataggcttatgctttttggtgcgactcttgacgaccaagccttttgctgctccagactcatgacgtacctccgtggcattagttataaggttacggtaggtgctcttgttgccaatgagggctggaatgcctctgaggatgcgctgaccgccgtaatcactgcggcttatctcactatctgccatcagaggtacctccgtacgcaggctatttcgaaggggatgaaaaggttggagctagagcatgcacagaaatttataacacgcctttacagttggttattcgaaaagtctgggcgtgactatatccccggccgccaactgcagttttatgctcagtgccgccggtggctatctgcaggtttccaccttgatcctcgtgtgctcgtttttgatgaggccgccccctgccgctgtcggagctttctgcgcaaagccgcccacaagttttgttgctttatgcggtggctaggtcaagactgcacctgcttccttcagcctattgaagggagggttggtgaacaaggttacgataatgaggcatttgaggggtcggatgttgaccctgctgaggaggccaccgtgagcattgccgggtcgtacattgttaccggccgccagctgcagcctctataccaagcgcttggcataccatctgatctcgctgcgcgtgccggtcggcttgctgccaccgttgaagtctcagatgcagagggtcgtcttacctgcaagaccattttgggcaacaaaactttttcaacggtattcactgatggtgctcagctagaggccaacgggccagagcagtacgttctatcatttgacttgactaaacaaactatggctgctggcccgcatagtctcagttacacccttacatctgaaggtcttgaagtgcatattatttctgctgggctcgattgcaaggctgttttcccgcctggcgtcgcaaccccctccgcttccggggaggtgtctgctttttgttcagctctttacaggtttaaccgctgcattcagcggcattctcttgttggaggcttgtggtattaccctgagagtttagttg
| 0 | 5 | 0.2 | 0 | 266 |
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] |
|
41 | 7,227 | 268 |
ON226515.1
|
Sus scrofa
|
Swine hepatitis E virus
|
Paslahepevirus balayani
|
Hepeviridae
|
Paslahepevirus
|
ssRNA(+)
|
ON226515.1 |Swine hepatitis E virus isolate SMU/HP8/2021, complete genome||Swine hepatitis E virus||2023-02-07T00:00:00Z|College of Animal & Veterinary Sciences, Southwest Minzu University|China|Zhang,B., Song,X.|SMU/HP8/2021|Paslahepevirus balayani|Paslahepevirus|complete|Hepeviridae|ssRNA(+)|7227|GenBank||||China|China||Sus scrofa||2021-05||
|
agtggtggcatcttacccataggtgccctgcggatgtctgtgagctgattcgtggtgcatacccaaagatccaaactgcgagccgtgtcctccgctctttgttttggggggagccccctgtgggccagaagctggtgtttacccaggcggccaaggccgctaaccccggtgcaattacagttcatgaagcccagggcgcaacattcaccgagaccacaatcatcgccacggcggatgcccgtgggttgattcagtcttctagggctcatgccattgtggccctaactcgccacacggagaagtgtgtggtagttgacgccccagggcttctccgtgaggtgggtatctccgatgctattgtcaataatttcttccttgctggcggcgaaattggtcagcatcgcccgtcagtcgtaccccgtggtaccattagcagcaacgttgacacgcttgatgcattccccccttcttgccagtttagtgcgtaccatcagctggccgaagagcttggtcaccggcccgcgccgattgctgctgttttgcccccttgtccagagcttgaacagggcttgctttatatgcctcaggagctaactacatcggacagtgttctcacctttgaactgacggacattgtgcattgccgtatggcggcacctagccagcgtatggcggtcctgtcgactcttgtcggcaggtatggccgccgtacgaagctttacgaggctgcacacgcggatgtccgcggatctctgaatcattttattcctgagcttggccctattaatgttactacttgcgagctctatgagcttgtggaggctatggtagaaaagggccaagacggctctgcagttctggagcttgacctatgtaatcgtgatgtgtcccggataaccttcttccagaaagactgcaataaattcacaacgggtgagacgattgcgcatggtaaagtcggtcagggcatatctgcatggagcaagaccttctgcgctttatttggcccgtggttccgcgctattgaaaaggagattttggcagcgcttgcacccaatatcttttatggtgatgcttatgaagacacagttttggccgctgccgttgcaggcgcctcaggctgtaaggtctttgagaacgacttttctgaatttgatagcacccaaaataatttctcgcttgggcttgagtgtataattatggaggagtgtggcatgccacaatggatggtgcggctttaccatcttgtccgctccgcctgggtcttgcaggccccaaaagagtccctgcgcggcttctggaagaagcactctggtgagcctggtaccctgctgtggaataccgtctggaatatggcggttatagcacactgttatgagtttcgtgacctcaaagttgcggcatttaagggggatgactctgttgtgctttgcagcgattaccggcagagtcgtaatgcggctgccttgattgctgggtgtgggctgaagcttaaggtggatttcaggcctattggactgtatgctggtgttgttgtggccccgggtcttgggacccttcctgatgttgttaggttcgctggacggctctcagagaagaattgggggccaggcccggagaggatggagcagcttcggctggccgtttgtgactttttgcgaaagctaacgaatgtggctcaggtctgtgtggatgttgtttcgcaggtctatggtgttagccccggtttggtacataacctgataggtatgcttcaaactatcgcggatggtaaagcgcacttcaccgagacgattaagcctgttcttgaccttactaactcaatagtatatcgggtggaatgaataacatgtttctttgctctttgcatggcgatgccaccatgcgctctcgggctcttctgtttttgctcctcctgcttttgcctatgttgcccgcgccaccggccggtcagccgtctggccgtcgtcgtgggcggcgcagcggcggtgccggcggtggtttctggggtgaccgggttgattctcagcccttcgccctcccctata
| 2 | 5 | 0.6 | 0 | 268 |
[
3,
5,
6,
5,
5,
6,
5,
5,
4,
3,
6,
4,
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42 | 1,698 | 270 |
KX815359.1
|
Equus caballus
|
Influenza A virus (A/equine/Argentina/E37-18/1993(H3N8))
|
Alphainfluenzavirus influenzae
|
oronasopharynx
|
Orthomyxoviridae
|
Alphainfluenzavirus
|
ssRNA(-)
|
KX815359.1 |Influenza A virus (A/equine/Argentina/E37-18/1993(H3N8)) segment 4 hemagglutinin (HA) gene, complete cds|set:743bf0e1f8b8426a7df8e36ac535c3ccee668336|Influenza A virus (A/equine/Argentina/E37-18/1993(H3N8))||2016-10-28T00:00:00Z|INTA, Virology|Argentina|Olguin Perglione,C., Golemba,M.D., Torres,C., Barrandeguy,M.||Alphainfluenzavirus influenzae|Alphainfluenzavirus|complete|Orthomyxoviridae|ssRNA(-)|1698|GenBank|H3N8|4|1|Argentina|Argentina||Equus caballus|oronasopharynx|1993-03-30||
|
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43 | 5,678 | 271 |
MK012651.1
|
Triticum aestivum
|
Barley yellow dwarf virus PAS
|
Luteovirus pashordei
|
Tombusviridae
|
Luteovirus
|
ssRNA(+)
|
MK012651.1 |Barley yellow dwarf virus PAS isolate Rannu1, complete genome|set:MK012651|Barley yellow dwarf virus PAS||2019-05-15T00:00:00Z|Tallinn University of Technology, Chemistry and Biotechnology|Estonia|Somera,M., Massart,S., Tamisier,L., Soovali,P., Sathees,K., Akkerman,A., Truve,E., Kvarnheden,A.|Rannu1|Luteovirus pashordei|Luteovirus|complete|Tombusviridae|ssRNA(+)|5678|GenBank||||Estonia|Estonia||Triticum aestivum||2014-07-23||
|
agtgaaggttgaccacctacacaaaaagactttgtgcttgaagtctacagctcacctgttttgtattcaggacgttgtctgcaaaaaaaacggtcaacagtacgcctgacaccgtactgccacctccctatcccccccgccaacatgcttctttttgaacttttgatcggcgctagcgtcaaagctgttaaggacttcatcagccactgctattcacgacttaaaagcatatattatgctttcaagagatggctgttggagatatccgggcaattcaaggcccatgacgcttttgtcaacatgtgctttgggcacattgctgacatcgaagacttcgaggctgaactcgctgaagagttcgccctgaaggaggaagagatcgaggaggcaagaagcctcatgcgactgctcaccgcccaaaaagccaaatctggggtggtggaggcttggaccgacttcttcttgaagtcgagaggcggggtttatgccccgctttcctgcgagccttccaaggcagagcttgaggtcaaagccgaaaagctcgaaagactacttgaggacatgcacaaatttgaagtgcaagcggcaaagaagtatataaaagaaaaaggccgcgggtttatcaactgctggaacgatctccgttccagactcaagttagtcaaggaggtaaaagacgaggccaatgacaacatcaaggccgcctccaagatcggcgtggaattctccgcacccaccaacatccaggacctatacaccttcacaaaggttgaaaaagtcgagactggcctcatgaaggaggtcacaaagatggtgcaaggggaggaaaccaagcacatggagcccatcactgaggacatgcgctccattaaggacacagcggaagaccgagaggccgcctccaagtggataacggaggtggttaaattgaaaaattcaaccctgtctgccgatgaactgtccatggccaccatcgcccggtatgtggaaaatatcggagaaaaatacaaactcgacattgcttccaagacatatctcaagcaatgtgcaatgatgtctgtcccaattcccactcaaaaagacatcaaaatgaagatggtgatccagagccctgctgcacgagctgcgcgtgagcgcgtagctgtgcttgattcccagggtttttagaggggctctgtgcctcctccggttttgaaagtcccttttctctattaggactgccggagattaaggtcacagacggagcccgtttacgtaaggttagtagtaatattaggtacctaacccaaacccacctcggcttggtatacaaagccccaaacgcctccctgcacaatgccttggttgcagtggagagaagagtgtttacagttggtaagggggacaaagctatctaccccccccacccagagcatgacattttcactgagactatggactacttcgccgagtccgtaattgaaaaagtgggacactgtaagacttacactccacagcagctagctcttagttatagcgcagggaaaagagcccaatacttcaaagccgtcgagtcacttaagaaagaaccttatcagatgaaggactcgaatgttcaggcattcctcaagaaggagaagcattggatgaccaaagccatcgcccctcgcctgatctgcccccgctccaagcggtacaatatcatccttggaactcgcttgaaattcaacgagaagaagatcatgcacgctatcgatagtgtgtttggatcccccactgtgctttccggctatgatagcttcacccagggtgaaattatagccgaaaagtggcaaaagtttgcatcaaccgtcgccatcggtgttgatgctagccgctttgaccagcatgtgtcagagcaggcgcttaagtgggaacacgggatatacaatggcatatttggcgacattgaattggccaccgctctcgaacatcagcttgtaaataatatcaaaatgttcgttgaggataaaatgcttacatttaaggtgagaggccataggatgtccggggacataaacaccagcatg
| 0 | 4 | 0.2 | 0 | 271 |
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|
43 | 5,678 | 272 |
MK012651.1
|
Triticum aestivum
|
Barley yellow dwarf virus PAS
|
Luteovirus pashordei
|
Tombusviridae
|
Luteovirus
|
ssRNA(+)
|
MK012651.1 |Barley yellow dwarf virus PAS isolate Rannu1, complete genome|set:MK012651|Barley yellow dwarf virus PAS||2019-05-15T00:00:00Z|Tallinn University of Technology, Chemistry and Biotechnology|Estonia|Somera,M., Massart,S., Tamisier,L., Soovali,P., Sathees,K., Akkerman,A., Truve,E., Kvarnheden,A.|Rannu1|Luteovirus pashordei|Luteovirus|complete|Tombusviridae|ssRNA(+)|5678|GenBank||||Estonia|Estonia||Triticum aestivum||2014-07-23||
|
cctgatctgcccccgctccaagcggtacaatatcatccttggaactcgcttgaaattcaacgagaagaagatcatgcacgctatcgatagtgtgtttggatcccccactgtgctttccggctatgatagcttcacccagggtgaaattatagccgaaaagtggcaaaagtttgcatcaaccgtcgccatcggtgttgatgctagccgctttgaccagcatgtgtcagagcaggcgcttaagtgggaacacgggatatacaatggcatatttggcgacattgaattggccaccgctctcgaacatcagcttgtaaataatatcaaaatgttcgttgaggataaaatgcttacatttaaggtgagaggccataggatgtccggggacataaacaccagcatgggaaacaaactcataatgtgtggcatgatgcacgcatattttaaraagctgggtgttgaagctgagttgtgcaacaacggagacgactgtgtcatcatcactgagagagccaatgagaagctctttgatggcatgtacgaccatttcttgaaatacggcttcaacatggtgacggaagccccagtttatgaactcggggaactcgaattttgtcaatcaaaacccgtcagaatagatggcaaatacagaatggtaaggagaccagactgtattggaaaagacagctgcacacttttgagcatgttgaatgaggctgacgtcaagagttacatgtcagctgtggctcagtgtggactcgttttgaatgcgggtgtgcccattctggaaagcttctaccgctgcctgtacagaagctctgggtacaagaaagtgagtgaggaatacatcaaaaacgtcatatcatatggaacagatgaacgccttcaaggtagacgtaccttcaaggagacacctatcacaaacgacaatcgaatgtcgtactgggaatcattcggagttgaccctaagatacaacaactcgtcgagcggtacttcgacggtcttacggtaagtgcccaactccagagagtgaaggtgacatctccacatctgcaatcaatcctcctctccattccggagaacaactcgcaaaacgaatattaattaccaaatcttagccgggtttgggatagggtttatagtaagtattccctgtacattagctctcacgtactttatttacaataaagtttcagacaccactagagaggtggtgaatgaattcagtaggccgtagaggacctagacgagcaaatcaaaatggcccaagaaggcggcgccgtagagcaattcggccagtggttgtggtccaacccaatcgagcaggacccagacgacgaaatggtcgacgcgcaggaagaagagggccaaattctatacctggatcagcaggcaggactgaggtattcatattctcagtcgacaaccttaaagccaactcttccgggacaatcaaattcggccccagtctatcgcaatgcccagcgctttcagacggaatacttaagtcctaccaccgttacaagatcacaagtatcggtgttgagtttaagtcacacgcgtccgccactacgtcgggcgctatctttgttgaactcgacaccgcgtgcaagcaatcagccctgggtagctacattaattccttcaccatcagcaaaactgcctccaaatccttcagagccgaggcgattaatgggaaggacttccaagaatcaacgatagaccagttctggctactatacaaggcaaatgggacaactactgacactgctggacaatttataataaggataaatgtcagtatgttgactcccaaataggtagactcctcaacaccggaaccgaaaccagcaccagaaccagaaccaactccaacaccagaacccacaccagcgccgcagcctacacctgagcccactcctgcaccagcccccaagagattctttgagtatgtcggaactccaaccggcacaatctcaaccagagagaattctgacagcatctctgtcagcaaacttggcgggcagtcgatgcagtacatagagaatga
| 1 | 4 | 0.5 | 0.000488 | 272 |
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|
43 | 5,678 | 273 |
MK012651.1
|
Triticum aestivum
|
Barley yellow dwarf virus PAS
|
Luteovirus pashordei
|
Tombusviridae
|
Luteovirus
|
ssRNA(+)
|
MK012651.1 |Barley yellow dwarf virus PAS isolate Rannu1, complete genome|set:MK012651|Barley yellow dwarf virus PAS||2019-05-15T00:00:00Z|Tallinn University of Technology, Chemistry and Biotechnology|Estonia|Somera,M., Massart,S., Tamisier,L., Soovali,P., Sathees,K., Akkerman,A., Truve,E., Kvarnheden,A.|Rannu1|Luteovirus pashordei|Luteovirus|complete|Tombusviridae|ssRNA(+)|5678|GenBank||||Estonia|Estonia||Triticum aestivum||2014-07-23||
|
tcagcaaaactgcctccaaatccttcagagccgaggcgattaatgggaaggacttccaagaatcaacgatagaccagttctggctactatacaaggcaaatgggacaactactgacactgctggacaatttataataaggataaatgtcagtatgttgactcccaaataggtagactcctcaacaccggaaccgaaaccagcaccagaaccagaaccaactccaacaccagaacccacaccagcgccgcagcctacacctgagcccactcctgcaccagcccccaagagattctttgagtatgtcggaactccaaccggcacaatctcaaccagagagaattctgacagcatctctgtcagcaaacttggcgggcagtcgatgcagtacatagagaatgagaaatgtgaaacaaaagtcattgactctttctggagcactaacaacaacgtatctgcccaggcagcattcgtttatccagtgccagaaggttcatacagcgtcaacatttcgtgtgaaggctttcaatccgttgaccacattggtggcaacgaggatgggtactggattggtcttatagcctactccaattcatcaggcgacaattggggagtaggtaattatagagggtgcagtttcaaaaacttcttggcaaccaatacttggagaccaggccacaaagatctcaagttgaacgattgccagttcacagatggacaaatagttgaaagggatgccgtgatgtcttttcacgtcgaagctacaggtactgatgcctgtttctacctaatggctcccaaaacaatgaaaactgacaagtacaactatgttgtctcttacggagggtacacaaacaaacgaatggaattcggtaccatatctgtgacatgcgatgaatccgatgttgaggcaagacgcataacaaggcactctgaaactcccatccgctccaagcacatccttttgtccgagcggtatgaggagccatcacccaccataaccgatcaaggcttgtgtgatgtgaaaacttccgagcaagaacaaacattggtggatgaagaagacagacaaactgtttccactgaacctgatatagcactccaggaatacgaagctgccacagctgaaattcctgatgctgaagaggatgttttgccctccaaggaacagttgtcttctaagccattggacacgtctggcaatataatacctaaacccaaggaacctgaagtacttggaacataccaaggccagaacatttaccctgaagacgtgccaccgctagcgcggcagagattgcgcgaagccgcgaaagcaccctccacgttgctatatgagcgaacgccgaagaagagcaacaacttcttgactcgttttgtggaggcgaataggtcccctaccactcccgctgccccaacagtgtcaactacatcaaacatgacaagggaacagcttgcggagtacactagaattaggaaatcccttggactcacagcagcwaaggaatacaaggcgcaatttcagtgaaggtaccaccactagcacaaatcggatcctgggaaacaggcagaactacggttcataagctcgggtaggccgtcaacctaccgccgtatcgtattgtgtttggccgatggatgacctccacgttatcgccgtttgtatttttgctctaactgtgttgacagggttaggcgcggtgatcggctgttgtgccggttgccttctcccccctccctccttccgctcttctgtttaagcaaaaatctctcggtctgtgcgagagaaactcaaaaatatcggggagcttcggctcagtgaggggattaacgacccccagcaatggctggtcttggcggacatgaataacccgctataagacgaagtggtaaccgccactgatcaaaaggtaaacatgcttctgtgttgtacactgccccggggcctaccgggtcaacaaggctatcccaccaactcaatgaaatgagagtggagtgggcggagtgggtgacttcgtgatgtacacccgatcgtcaggattgaagacgt
| 2 | 4 | 0.8 | 0.000488 | 273 |
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|
44 | 1,665 | 274 |
MF445943.1
|
Homo sapiens
|
Human respiratory syncytial virus A
|
Orthopneumovirus hominis
|
oronasopharynx
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
MF445943.1 |Human respiratory syncytial virus A strain FJ131009-12 fusion protein (F) gene, complete cds|set:MF445943|Human respiratory syncytial virus A||2019-12-31T00:00:00Z|Fujian Provincial Hospital, Department of Clinical Laboratory|China|Su,Y., Wu,Y., Tian,R., Liang,G.||Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|1665|GenBank||||China|China||Homo sapiens|oronasopharynx|2013-10-09||
|
atggatttgccaatcctcaaaacaaatgcaattactgcaatccttgctgcagtctcactctgtttcgtttccagtcaaaacatcactgaagaattttatcaatcaacatgcagtgcagttagcaaaggctatcttagtgctttaagaactggttggtatactagtgttataactatagaattaagtaatatcaaggaaaataagtgtaatggaacagacgctaaggtaaaattgataaaacaagaattagataaatataaaaatgctgtaacagaattgcagttgctcatgcaaagcacaccagcagccaacaatcgagccagaagagaactaccaaggtttatgaattatacactcaacaataccaaaaataacaatgtaacattaagcaagaaaaggaaaagaagatttcttggctttttgttaggtgttggatctgcaatcgccagtggcattgctgtatctaaagtcctgcacctagaaggagaagtgaacaaaatcaaaagtgctctactatccacaaacaaggctgtagtcagcttatcaaatggagttagtgtcttaaccagcaaagtgttagacctcaaaaactatatagataaacagttgttacccattgtgaacaagcaaagctgcagcatatcaaacattgaaactgtgatagaattccaacaaaagaacaacagactactagagattaccagggaatttagtgttaatgcaggtgtaactacacctgtaagcacttatatgttaacaaatagtgaattattatcattaatcaatgatatgcctataacaaatgatcagaaaaagttaatgtccaacaatgttcaaatagttagacagcaaagttactctatcatgtccataataaaggaggaagtcttagcatatgtagtacaattaccactatatggtgtaatagatacaccttgttggaaactacacacatcccctctatgcacaaccaacacaaaggaaggatccaacatttgtttaacaagaaccgacagaggatggtactgtgacaatgcaggatcagtttctttcttgccacaagctgaaacatgcaaagttcaatcgaatcgagtattttgtgacacaatgaacagtttaacattaccaagtgaagtaaatctctgcaacattgacatattcaaccctaaatatgattgcaaaattatgacttcaaaaacagatgtaagcagctccgttatcacatctctaggagccattgtgtcatgctatggcaaaactaaatgtacagcatccaataaaaatcgtggaatcataaagacattttctaatgggtgtgattatgtatcaaataagggggtggacactgtatctgtaggtaatacattatattatgtaaataagcaagaaggaaaaagtctctatgtaaaaggtgaaccaataataaatttctatgacccattagtgttcccttctgatgaatttgatgcatcaatatctcaagtcaatgagaagattaaccagagcctagcatttattcgtaaatctgatgaattattacataatgtaaatgttggtaaatccaccacaaatatcatgataactactataattatagtgattatagtaatattgttattattaattgcagtgagtggtataaataatattgcatttagtaactga
| 0 | 2 | 0.5 | 0 | 274 |
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45 | 1,633 | 275 |
MN135942.1
|
Orthonairovirus haemorrhagiae
|
Orthonairovirus haemorrhagiae
|
Nairoviridae
|
Orthonairovirus
|
ssRNA(-)
|
MN135942.1 |Orthonairovirus haemorrhagiae strain 61T/Pakistan nucleocapsid protein (NP) gene, complete cds|set:c195d64b11953a2e9369806f2d42770e0a57154b|Orthonairovirus haemorrhagiae||2020-03-31T00:00:00Z|Wuhan Institute of Virology, Key Lab of Special Pathogens|China|Zohaib,A., Saqib,M., Athar,M.A., Hussain,M.H., Sial,A.U., Tayyab,M.H., Batool,M., Sadia,H., Taj,Z., Tahir,U., Jakhrani,M.Y., Tayyab,J., Kakar,M.A., Shahid,M.F., Yaqub,T., Zhang,J., Wu,Q., Deng,F., Corman,V.M., Shen,S., Khan,I., Shi,Z.L., Sial,A.-U.-R., Ahmed,F., Faiz,S., Furqan,M., Shu,S., Shi,Z.-L.||Orthonairovirus haemorrhagiae|Orthonairovirus|complete|Nairoviridae|ssRNA(-)|1633|GenBank||S|1|Pakistan|Pakistan||||2017-10-13||
|
gcccacagtgttctcttgagtgttggcaaaatggaaaacaaaatcgaggtgaacaataaagatgagatgaacaaatggtttgaggagttcaagaaaggaaatggacttgtggacacttacacaaactcatattccttctgtgaaagcgttccaaatctggacagattcgtgttccagatggctagtgccactgatgatgctcaaaaggactccatctacgcatctgctctggtggaagcaaccaaattttgtgcacctatatacgagtgtgcttgggcaagctccactggcattgttaagaaaggactggagtggtttgagaaaaatgcaggaaccattaaatcttgggatgagagttacactgagctaaaagttgaagttcccaaaatagaacaactttccaactaccaacaggctgctctcaagtggaggaaagacataggcttccgtgtcaatgcaaacacagcagctttgagtaacaaagtcctagcagaatacaaagtccctggcgaaattgtaatgtctgtcaaagagatgttgtcagatatgattagaagaaggaacctgattctcaacagaggtggtgatgaaaacccacgcggcccagtcagccgtgaacatgtggagtggtgtagggaattcgttaaaggcaagtacataatggccttcaacccaccctggggggacatcaacaagtcaggccgttcaggaatagcacttgtcgccacaggcctagccaagcttgcagagactgaagggaagggagtttttgacgaagccaagaagactgtagaggctcttaacgggtatctggacaagcataaggatgaagttgacaaggcaagtgccgacagcatgataacaaacctccttaagcatattgctaaggcacaagagctttacaagaactcgtctgctcttcgcgctcagggtgcacagattgacaccgtcttcagctcatactactggctctacaaggccggtgtgactccagagaccttcccgactgtctcacagttcctttttgagttagggaaacaaccgagaggtaccaagaaaatgaagaaggcactcctgagcaccccaatgaagtgggggaagaagctttatgagctctttgccgatgattctttccagcagaataggatctacatgcacccagctgtgctaacagccggcagaatcagtgaaatgggtgtctgctttggaacaatccctgtggccaatcctgatgatgctgctttaggatctggacacaccaagtccattctcaaccttcggacaaacactgagaccaacaatccgtgtgccaagacaattgttaagttgtttgaaattcagaaaacagggtttaacatacaggacatggatattgtggcttccgaacacctgctgcaccagtctcttgttggcaagcagtctccatttcaaaatgcctacaacgtcaaggggaatgccaccagtgccaacatcatctaaagttcagaatactctgcaatcaactttaccattcctgctctgctattcataactgcaatcatcaattatgtttattttaactgcttatgtaatcctgttttgttaacattttcttattttcttctgttttaaacacttaaagggctgtgcggca
| 0 | 1 | 1 | 0 | 275 |
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||
46 | 7,045 | 277 |
OK181470.1
|
Homo sapiens
|
rhinovirus A1B
|
Rhinovirus A
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
OK181470.1 |Rhinovirus A1B strain RvA1B/USA/2021/BKCCJ9, complete genome||rhinovirus A1B|SRR15570970|2021-09-28T00:00:00Z|UW Virology, DLMP|USA|Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.||Rhinovirus A|Enterovirus|complete|Picornaviridae|ssRNA(+)|7045|GenBank||||USA|USA||Homo sapiens||2021|SAMN20933007|PRJNA723895
|
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| 1 | 5 | 0.4 | 0 | 277 |
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|
46 | 7,045 | 278 |
OK181470.1
|
Homo sapiens
|
rhinovirus A1B
|
Rhinovirus A
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
OK181470.1 |Rhinovirus A1B strain RvA1B/USA/2021/BKCCJ9, complete genome||rhinovirus A1B|SRR15570970|2021-09-28T00:00:00Z|UW Virology, DLMP|USA|Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.||Rhinovirus A|Enterovirus|complete|Picornaviridae|ssRNA(+)|7045|GenBank||||USA|USA||Homo sapiens||2021|SAMN20933007|PRJNA723895
|
atagatactatccaataaaagtcactccacatgattggtatgaaattcaagaaagtgaatactatcctaagcacattcaatacaatctactaattggtgaaggaccatgtgagcctggtgattgtggtggaaaacttctctgtagacatggtgtcatcggcataatcacagcaggaggtgagggccatgtagcgtttacagatcttagacagttccaatgtgctgaggaacagggcataactgattacatacacatgttaggagaagcctttggtaatggttttgtagacagtgtcaaggaacaaattaatgcaataaatccaattaatagtatcagtaagaaagttatcaagtggctgcttagaataatttcagctatggtcatcataattagaaactcttctgatcctcaaacaatcatagcaactctgactctaattggctgtaatggctcaccatggagatttcttaaggaaaaattttgtaagtggactcaattaacctatattcacaaggaatctgactcgtggcttaagaaatttactgaaatgtgtaatgctgcacgtggtcttgagtggattggcaacaaaatttcgaagttcatagattggatgaaatcaatgctacctcaagctcagctaaaagtcaaatacctaaatgagataaagaaacttagtttattagaaaaacaaattgaaaatctgcgtgcagcggataatgccacacaagaaaagataaagtgtgaaattgacaccttgcacgatttgtcatgtaaatttcttcccttatatgcacatgaggcaaagagaattaaagtgctttacaacaaatgctctaatataattaaacaaagaaagagaagtgaaccagtggcagtgatgatacatggaccacctggtactggcaagtccataacaactaatttcttggctagaatgataacaaatgagagtgatgtgtattcattacccccagatcccaaatattttgatgggtatgataatcagagtgttgtgattatggatgacattatgcaaaaccctgatggggaggatatgacactattttgtcaaatggtctcaagtgttacatttataccacctatggctgacctaccagacaagggcaaaccatttgattcaaggttcattttgtgtagtaccaaccactcactcctagccccacctaccatatcttcattacctgcaatgaatagaaggtttttctttgatttagatatcgtagttcatgataactataaagatgcacaagggaaactagatgtatctaaggcttttcaaccctgtgatgtcaatactaaaattggaaatgcaaaatgctgtccatttgtgtgtggtaaggcagtatcatttaaggatcgtagcacttgctcaacatacaccttagctcaagtttacaatcacattctggaagaagacaagagaaggagacaagtggtagatgtcatgtctgcaattttccagggaccaatttctctagatgctccaccaccaccagctatagcagatctattgcaatcagttaggacacctgaagtgataaaatattgccaggataacaaatggatagtcccagcggagtgtcaaatagagagagacttaaatattgctaatagcataataactattatagcaaacatcataagtatagctggtattatatttgtgatttataaacttttttgcacactacagggaccatactcaggtgagcctaaacctaaaaccaaaatgcccgaaaggagagtagttgctcaaggtccagaggaagagtttggaagatcaattcttaagaacaacacttgtgtaattactacagataatggaaaatttacaggtcttggcatttatgacagaattttgattgttccaacacatgccgatccaggcaaagaagttcaagttaatggcatccagactaaagtcttagactcatatgacctttacaacagggatgggattaaacttgaaataacagttataaaactggacagaaatgagaagtttagggacattagaaaatacata
| 2 | 5 | 0.6 | 0 | 278 |
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|
46 | 7,045 | 279 |
OK181470.1
|
Homo sapiens
|
rhinovirus A1B
|
Rhinovirus A
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
OK181470.1 |Rhinovirus A1B strain RvA1B/USA/2021/BKCCJ9, complete genome||rhinovirus A1B|SRR15570970|2021-09-28T00:00:00Z|UW Virology, DLMP|USA|Greninger,A.L., Xie,H., Cruz,K., Phung,Q., Lin,M.J.||Rhinovirus A|Enterovirus|complete|Picornaviridae|ssRNA(+)|7045|GenBank||||USA|USA||Homo sapiens||2021|SAMN20933007|PRJNA723895
|
tatagcaaacatcataagtatagctggtattatatttgtgatttataaacttttttgcacactacagggaccatactcaggtgagcctaaacctaaaaccaaaatgcccgaaaggagagtagttgctcaaggtccagaggaagagtttggaagatcaattcttaagaacaacacttgtgtaattactacagataatggaaaatttacaggtcttggcatttatgacagaattttgattgttccaacacatgccgatccaggcaaagaagttcaagttaatggcatccagactaaagtcttagactcatatgacctttacaacagggatgggattaaacttgaaataacagttataaaactggacagaaatgagaagtttagggacattagaaaatacatacctgaaacagaagatgattatccagaatgcaatctagcactttcagctaatcaaactgaaccaactataattaaggtaggagatgtagtatcttatggtaacattctacttagtggaaatcaaacagccagaatgcttaaatataactaccccacaaaatcaggatattgtggaggtgtgttatataaaattggtcagattttgggtattcatgtgggtggaaatggaagagatggattttcagctatgttgcttaggtcatacttcacagacacccagggccagattaaaatctctaaacatgccagcgagtgtggtcttccaagtatacatacccctagcaagactaaacttcaacccagtgtgttttatgatgtttttccaggctccaaagaaccggctgttctcacagataatgatcctagactagaagttgattttaaagaagctttattttctaaatataagggaaatgtagaatgcaatcttaatgaacatatggaagttgctattgctcattactcagcacaattggcaacattggacattgaccccaaaccaatagcattagaagatggtgtgtttggtatagagggacttgaagccttagatttaaatactagtgctggtttcccctatgttacaatgggtatcaaaaagagagatttaataaataacaaaacaaaagacatatccaggcttaaagatgctttggataaatatggagtggacttgcctatgatcaccttcctaaaggatgagcttaggaagaaagagaaaatttcagcaggtaaaaccagagtcatagaagcaagtagcataaatgatacaatactgtttagaactacttttggcaacttattctctaaatttcatttgaacccgggtgtagttactggttctgcagtagggtgtgatcctgaagttttctggtcaaaaattccagttatgcttgatggagattgcataatggccttcgattacacaaattatgatggtagcatacaccctgtttggttccaagccttgaagaaagttcttgagaatttatctttccaatctgatttaattgatagattgtgttactctaaacatttgttcaaatcaacatattatgaagtagcaggtggagttccttctggatgttctgggactagcatattcaatactatgattaataatattataataagaacactagttttagatgcatacaagaacattgacttggacaaattgaagataattgcatatggtgatgatgtgatcttttcttacaagtacactttagatatggaagccattgctaatgaaggaaagaaatatggacttacaataactccagcagataaatccactgaatttaggaaacttgattataacaatgtaacttttctcaaacgtgggttcaaacaagatgagagacatacatttcttattcaccctacattcccagtagaagaaatatatgaatcaattagatggaccaagaaaccttcacaaatgcaagaacatgttttgtcattatgccatttaatgtggcacaatggacgtaaggtgtatgaggatttttccagaaagatacgcagtgtcagcgccggtcgtgcactgtatatcccaccttacgacctcttaaaacatgaatggt
| 3 | 5 | 0.8 | 0 | 279 |
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] |
|
48 | 2,873 | 282 |
MN770955.1
|
Homo sapiens
|
TTV-like mini virus
|
TTV-like mini virus
|
Anelloviridae
|
Betatorquevirus
|
ssDNA(-)
|
MN770955.1 |MAG: TTV-like mini virus isolate SAfiA-630A-25, complete genome||TTV-like mini virus||2021-12-19T00:00:00Z|University Hospitals of Geneva, Laboratory of Virology|Switzerland|Cordey,S., Laubscher,F., Hartley,M.A., Junier,T., Keitel,K., Docquier,M., Guex,N., Iseli,C., Vieille,G., Le Mercier,P., Gleizes,A., Samaka,J., Mlaganile,T., Kagoro,F., Masimba,J., Said,Z., Temba,H., Elbanna,G.H., Tapparel,C., Zanella,M.C., Xenarios,I., Fellay,J., D'Acremont,V., Kaiser,L., Hartley,M.-A., Zanella,M.-C.|SAfiA-630A-25|TTV-like mini virus|Betatorquevirus|complete|Anelloviridae|ssDNA(-)|2873|GenBank|||1|Tanzania|Tanzania||Homo sapiens||2015||
|
acattaatattcaacaggaaaacacctaatttaaattgccgaccacaaaccgtctttcacttctccttttttacaaacttccccttttcctcattattattcattaaattaattaatactcctcgtaattccggggaggagctaactatctatataactaagtacacttccgaatggctgagtttatgccgccagacggagacgggatcacttcagtgactccaggctgacattgggcgggtgccgaaggtgagtgaaaccaccgtagtcaaggggcttatcgggctatgtcagtctggcggaacgggctagaaacttaaaataatttttttacagatgcaaatagaaccaccatgcttgaaaaaaagagaattatctctacaatggcttaatggattagtccacattcacgacttcatctgcaaatgcaacaaacctcttgaacacacgcttgacacaattgttacagaagaaccaaacctgagactacctgaatctacaaaagaaaaacttaaaaaatgccttggtggtacaaaagaagatacccctggagaagacgacgttggcgttggagaaggagacctagacgcacttttcgcagaggattttatcgacgataccgggtaagatcaaaaacaaaaagaaaacttgctaaactaactctaaaacaatggcaaccagaaaaaattcaaaaactgagaataaagggactatatcctttattcctaactaaccaccaaagagtaactaacaatatgatacaatacctagactctatagctccgcaatattacccaggaggaggaggcttcagtattataaaattcacattacaatgcctctacgaacaatttataaagagcacaaactggtggacaaatacaaactgtaacttaccacttataagatacaatggatgtactataaaattgtatgctacagaaaaatatgattatattgtacatattgaccgctgttatcctctctatgctactgatcttatgtatatgggatgtcaaccaagtatactaatgcttactaaaaaggctatctttgtaccatgtagacagagtaatccaagaagaaaacattacaaaaaagtattcattagaccaccaacacaaatgtctaacaaatggatgtttcaacaagactttgcaaacaccacactttttgtactcagagcctcagtatgtagttttgacagatactacactagcagcaacgcaagctccactactgcaggcttcacaagcttaaattgtaactcatttacatatcacaactggaatcaaccacccactacaggatacagaccaaattccacacaatacctatattcagtaaaatgggcagacacagacaccatagacaaagtactacaaaaacattatgaagacttaatatacctaggaggcacaggaccatacacactaggaacaagtgctaaagactcaggcagcaaagacacatacatgtcaaaaaaacaattttggggaaacatattccacccaaaatacctcacaggatctattccagtactagtaacaactaaatcacccacagaaatacaacaaaaaataacatctgcatccaccacaaacatacaagaaaacttcacagttaaaccaacagcaaacataactcaatgcagatacaatccatttgcagacaaaggagtcggaaacttagtattcctcacaaaaaacacaggcacaccagaagaatgggcacctccacacgatgaaaaactagaaagagccaatttaccaatatggctatgtttatttggctttctagactggcaaaaaaaactaaatgaagtacaaaatatagacacatactggctttgtgtaattaaaagcccatatataactccagcccaaacttactacctaccactagacaaaacattcctacaaggatactctccatattcaaatcaactaacaacaccagatgacaaattcttttaccctaaatgcagtttccaagtacaagccattaatgaactaggtagtacgggcccaggaattgttaaactacca
| 0 | 2 | 0.5 | 0 | 282 |
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] |
|
48 | 2,873 | 283 |
MN770955.1
|
Homo sapiens
|
TTV-like mini virus
|
TTV-like mini virus
|
Anelloviridae
|
Betatorquevirus
|
ssDNA(-)
|
MN770955.1 |MAG: TTV-like mini virus isolate SAfiA-630A-25, complete genome||TTV-like mini virus||2021-12-19T00:00:00Z|University Hospitals of Geneva, Laboratory of Virology|Switzerland|Cordey,S., Laubscher,F., Hartley,M.A., Junier,T., Keitel,K., Docquier,M., Guex,N., Iseli,C., Vieille,G., Le Mercier,P., Gleizes,A., Samaka,J., Mlaganile,T., Kagoro,F., Masimba,J., Said,Z., Temba,H., Elbanna,G.H., Tapparel,C., Zanella,M.C., Xenarios,I., Fellay,J., D'Acremont,V., Kaiser,L., Hartley,M.-A., Zanella,M.-C.|SAfiA-630A-25|TTV-like mini virus|Betatorquevirus|complete|Anelloviridae|ssDNA(-)|2873|GenBank|||1|Tanzania|Tanzania||Homo sapiens||2015||
|
atgcagatacaatccatttgcagacaaaggagtcggaaacttagtattcctcacaaaaaacacaggcacaccagaagaatgggcacctccacacgatgaaaaactagaaagagccaatttaccaatatggctatgtttatttggctttctagactggcaaaaaaaactaaatgaagtacaaaatatagacacatactggctttgtgtaattaaaagcccatatataactccagcccaaacttactacctaccactagacaaaacattcctacaaggatactctccatattcaaatcaactaacaacaccagatgacaaattcttttaccctaaatgcagtttccaagtacaagccattaatgaactaggtagtacgggcccaggaattgttaaactaccacctgcacaatcctgtgaagctcattttaaatataactttcactttaagcttggaggctgtcctgctccaatggaaaaaatatgtaaccccgtcaaccaaccaaaatatcctgtacccgatactaagtctgcaacaccttcgttacagagtccagaaacagccttgcaaaccttcctatactccttcgatgaaagacaaggactccttacacaaacagctgcaaaaagaatcaaaacgcaccatggaactcaaaaacttattttgccgtttacaggagcagcaaccgacctccaaacaccccccgaaagaacatcggaggaggaaacatcggactcggaaaaagaagaagagaacatacagctccagctccagcacctcagaaaacagcaacacaagctcaagcagcgaatactccgactaatggaccaacaaaatttagaataactcatagcactgtaaaaattgatttgtttaatgatccaaagcctgtaaaaaatcgtagaatgactgctgaagaatttgaacaagagttaattgttgcaaaggcctttagaaggccaccatgtcattttatacatgataaaccattctatccatatgtaccaaaccttgatcgtttcatggtaaactttgacttaaacccccctcaataaacaaggccagcattatttcactctcggtgtccatttatttaagtttaaacctatataaacatccaccaccctccctaatacgcaggcgcacaagggggctccgcccccttgaacccccaagggggctccgcccccttaaacccccaagggggctccgcccccttacaccccc
| 1 | 2 | 1 | 0 | 283 |
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] |
|
49 | 2,376 | 284 |
KX708515.1
|
Gallus gallus
|
Avian gyrovirus 2
|
Gyrovirus galga1
|
spleen, liver, abdominal cavity
|
Anelloviridae
|
Gyrovirus
|
ssDNA(-)
|
KX708515.1 |Avian gyrovirus 2 isolate LN1511, complete genome|set:KX708515|Avian gyrovirus 2||2017-03-19T00:00:00Z|Harbin Veterinary Research Institute, Chines Academy of Agricultural Sciences|China|Yao,S., Gao,X., Tuo,T., Han,C., Gao,Y., Qi,X., Zhang,Y., Liu,C., Gao,H., Wang,Y., Wang,X.|LN1511|Gyrovirus galga1|Gyrovirus|complete|Anelloviridae|ssDNA(-)|2376|GenBank|||1|China|China||Gallus gallus|spleen, liver, abdominal cavity|2015-11-27||
|
ggatcctcccccccggaccccccgtcaataaataattaaataaaccaaatcgaattatttatttattttcggcgcgcgcgccagcagcctgtacacagagacgtcgctcgggtcctccggaccctcgctcctcaaccttttcttattaaaatcatcacccagcgcgacaaacgccacaaggcgtggtaaccaacgatatgtaagtaaactgagactcataccggtacaggggggtacgtcaccatgtacaggggggtacgtcaccatgtacaggggggtacgtcatcatgtacaggggggtacgtcaccatgtacaggggggtacgtcaccatgtacaggggggtacgtcacagccaatcagaattgagcacgcccaggaacgcccctgggcggggagatgctatcaatttagggatataagcagagcacataccggacggcggtaggtatgtcatccggcggtctcggggattgcagcgcctgtgagaaccgagccgctgggggcagtgaattgccgcttaggcaagaggggcaacttgggcccagcggagccggatccacgggcaagacactaaatgcagaccccccgctctcgccgacgagcaacaactactcagtcagaactattaacggcatacgagcatccaacaagttcgtctccgccagcagaaacgacctcgatagagatccaaattggtatcgggtcaactataattactctatcgctacctggctacgccagtgtgcgcgttctcacgacgagatctgcacctgcggacgatggaggagtcactggttccaggaggctagtggacttgtcacacaggagacccagacggaccagctcgccagagatctacgtcggcttcgccgcaaaggagaagcagcaaaaagaaaacttgattaccttaagggaaaacggaccccctataaaaaagctaagactgtaacatggcaagactacgaagaagacgacctcgcggacgctttggcttctaccacagaggacgatggcactggagacacagactgcgacgaagacgctattcccggaggggtaaatttcgatatgcgcgtagaagatcctttgatcgccgcgttaagaggaggatcttcaacccacacccgggctcctatgtggtaaggctaccgaacccttacaataagcttaccctctttttccaaggcattgtattcattccggaggctcaagcttttgttaaaagcacctataaaaagactaaccttacggtttgccatgtagcctccataaatgttaacctccgagaatttatgcttgcaacaatgcctttagatgcaaagagcaaaatcggaggccctaacccttatcctcagcacttgcaggggtgccaatggtcagcacaaacgacgcaggacgcatggccgtacgcagcgggcatgtcagagacaaaaagacccagcgtaccaccgagtgagtggtggcgctgggctctcctggtgatgcaccctagagcacctggcagattttacaatgccccaaagctaatgactctggacgctatgggagacctcttagggggctggcaactattccgtcatgttaaaaccaagttcagagtgctggccactatgggccagggtgcattctcaccggttgcaagcctccttgtgcaaaatgactattggagcaggaggcacttagagggcttcccagtgaaaggtgcaccgcctatgtgcaccatgcaaagaaagactcagcaatacggcaacgtggagtccaacgctccagcagatgagcagtggctaccggtgaatcccccagacccaccagtgtaccctaaccagggaggatgctcccaaaacgtggctccaggcatataccggcttgcaggcttagaagacagtagcagatgcttttattcaaaggcttgtttccccagctttgcagcgctttctgctatgggggcaccctggtcatttcctagcactcaaaaacccattcaaagaggctcatttaacaaacattccatcacggggacaggggacccccagggccgacggtggt
| 0 | 2 | 0.5 | 0 | 284 |
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] |
50 | 9,736 | 285 |
LC494711.1
|
Prunus mume
|
Plum pox virus
|
Plum pox virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
LC494711.1 |Plum pox virus strain M isolate K2 genomic RNA, nearly complete genome||Plum pox virus||2021-03-27T00:00:00Z|Research Division, Plant Pathology Section; 1-16-10, Shin-yamashita, Nakaku, Yokohama, Kanagawa 231-0801|Japan|Oya,H., Fujiwara,Y., Kasukabe,R., Motokura,Y.|K2|Plum pox virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9736|GenBank||||Japan:Kanagawa, Kawasaki|Japan||Prunus mume||2017||
|
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| 0 | 6 | 0.2 | 0 | 285 |
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|
50 | 9,736 | 286 |
LC494711.1
|
Prunus mume
|
Plum pox virus
|
Plum pox virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
LC494711.1 |Plum pox virus strain M isolate K2 genomic RNA, nearly complete genome||Plum pox virus||2021-03-27T00:00:00Z|Research Division, Plant Pathology Section; 1-16-10, Shin-yamashita, Nakaku, Yokohama, Kanagawa 231-0801|Japan|Oya,H., Fujiwara,Y., Kasukabe,R., Motokura,Y.|K2|Plum pox virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9736|GenBank||||Japan:Kanagawa, Kawasaki|Japan||Prunus mume||2017||
|
tgatactaatggcaattttgtgtggggacagagagagtatcatgccaaacgcttctttaggaattatttcgatgtgatcgatgttagcgagggctacagacgtcatattgttcgtgaaaatcctagaggcatccgcaaattggccattggcaaccttgttatgtcaacgaatctggcagcactacgtaagcagctcttgggtgaagagtgcattcattttgaggtctcaaaggaatgcactagcaagcgaggggaaaattttgtataccaatgttgctgtgtcacacacgaagacggtacaccactggagtctgaaataataagtccaacaaagaatcatttagttgttggtaactcaggtgattcgaagtatgtggatttgcctacagcaaagggaggtgcaatgttcatagcaaaggcaggttattgttacatcaacattttccttgctatgctgatcaacataaatgaagatgaagcaaaaagtttcacaaagacagtgcgtgacactattgtacccaagcttggaacatggccatcgatgatggacttagctacagcttgccactttctcgcagttctctacccagaaactcggaatgctgagcttccacgaatactcgttgatcatgaagcaaagatctttcatgtggttgactcattcggatcactgtcaactggaatgcatgttttgaaagcgaacacaatcaatcaacttattagctttgctagtgatacattggattcaagcatgaaaacatacctggttggaggtcttgaagtggataagtgtgacgaattcaaaaatgtcaagctcttgatcagaagcatttacaagccacaaatcatggagcaggtgcttaaggaagaaccatatttactgctcatgagcgttttgtcacctggtgtcttaatggcgctgttcaatagtggttcattggaaaaagccacacaatattggatcacacgatctcatagcttggcagcgatcacatcaatgttatcagcacttgcagccaaagtctcactagcaagtacactgaatgcacaaatgagtgtcattgacgaacatgcagcagttctgtgtgatagtgtctttgatggaaccaagccatatgcatcctacatgatggcagtaaagactttagaaagaatgaaggcacgaactgaatctgatcacaccctgaatgatttagggttttcagtactcagacaggcgacaccacatctggttgaaaaaagttatctccaggagttggagcaggcttggagagaattaagttggtcggaaaggttctctgcaatcttggaatcgcagcggtggcgaaaacatataccaaaacctttcatcccgaaagacgcagcagatttaggaggcaggtacgacatctccgttcggtcattacttggcagccaatacaaacgcctgaaagacgcagttcggcggaaaagagacgacgttgtttgttacacacaccagtcgatgggaaagctgttctgcaaagctatcggaatttccacaagttttcttccaagcactctgaagatgtttgacatgctcatcatatttggtctcctgctttcaataggagccacatgcaattcaatgattaatgagcacaaacatttaaagcaagttgctgccgatcgtgaagataagaaaagattcaagagattgcaggtcttgtacacgagactattagaaaagattggttgcacaccaacagcggatgaatttcttgaatatgtgcaaggtgagaaccctgatctattgaaatatgcagaggacttgatcggcgatgggcaagttgttgtgcatcaaagcaaaagagattcacaagctaatctggaacgagtcgtagcatttgtagcccttgttatgatgctttttgatgcggaacggagtgatggtgtttacaaaatcctcaataagcttaaaggcgtcatgggaagtattgatcagactgttcaccatcaaagtttggacgacattgaagacatgttggacgaaaagaaattgacagtcgattttgtcttgcaaagtaacg
| 1 | 6 | 0.3 | 0 | 286 |
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] |
|
50 | 9,736 | 288 |
LC494711.1
|
Prunus mume
|
Plum pox virus
|
Plum pox virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
LC494711.1 |Plum pox virus strain M isolate K2 genomic RNA, nearly complete genome||Plum pox virus||2021-03-27T00:00:00Z|Research Division, Plant Pathology Section; 1-16-10, Shin-yamashita, Nakaku, Yokohama, Kanagawa 231-0801|Japan|Oya,H., Fujiwara,Y., Kasukabe,R., Motokura,Y.|K2|Plum pox virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9736|GenBank||||Japan:Kanagawa, Kawasaki|Japan||Prunus mume||2017||
|
aaatttttcggttgctcaaaagctacagactgcgcgactcagaagtaattctgaataagttagccataccaaacagcaatgtgtgtgggtggatgagtgttcgtgattataagcgacaaggctgtaatttggacctcgatgaaaacatccgtgtgccattctatgtgaaggacattcctgaaactctacatgacaaagtttggcaagcagtggaaactcataagtcggatgcaggatttggaagaatttgcagttcgagtgcttgcaagatagcatacacattgcagacagatatccactccattcctcggacagtcaaaatcattgacgcattgttagagcaagaaaggacaaagcaagcacacttcagagcgatgaccagccaatcttgttcaagttcgaatttttctctatcaagcatcacatcagcaattcgctcgaagtatgccaaggatcacactgaggagaacattggtgttctgcagatggcgaagtctcaattgttggaattcaaaaatctgaacatcgatccaagttaccctgagctcgttcgcaactttggtgctctagaatgtgtgcatcatcagacaaaggagggagtctcaaagacactgcagctaaaagggcattggaacaagcgactcatcacacgtgacgcaacattgatgctcggagttcttggtgggggagcatggatgattttcacttatttgaaggatagttttcaagaagaagttgttcaccaaggcttcaaccgcaggcaaagacaaaagttaaagttcaggcaagcccgggataatagaatggcaagagaggtgtatggcgacgattcaactatggaggactacttcggttccgcatactcaaagaaagggaagagcaagggaaaaactagaggaatgggaacgaaaactcgcaagtttgtgaacatgtatggttatgaccctacagattataacttcgttcggttcgtcgatccgttaactggtcatactttggatgagaaccctctcatggacatcaacctggtgcaggagcatttttcgcaaatccggaatgactacattggagatgacaagatcacgatgcaacacataatgtcaaatcctggtatcgttgcgtattacatcaaggatgcaactcaaaaagccctcaaagttgatcttacaccacataacccattgcgcgtatgtgataagactgctactattgcaggatttccggagagagaatttgaattgaggcagacaggacacccaactttcgtcgaacctaatgcaattcctaagatcaatgaggaaggggaagaagaagttgatcatgaaagcaagtccttgtttagaggcttgagagactacaatccgatcgcaagttcgatatgccagttgaacaattcgtccggcactcgtcagagtgagatgtttggtcttggtttcggaggactaattgttacgaatcagcaccttttcaaaagaaatgatggagagttaacaattcgatcacatcatggtgaatttgtggtgaaggacacgaaaactctcaaactgctaccttgtaagggtcgcgacatagtgatcatccgattgccaaaggactttcccccttttcccaaaagattgcagttccgaacacccaccacagaggatagagtctgcctaattggatcaaactttcaaacaaagagcatatccagcaccatgtcagaaacaagtgccacatatcctgttgacaacagtcacttttggaagcactggatcagcacgaaggacggtcattgtggactgcctatcgtaagtactcgagatgggagtattcttgggctgcacagtcttgcaaattcaacgaatacgcaaaatttctatgcagcatttcctgacaactttgagaccatatacttgtcaaaccaggataatgacaactggataaaacaatggcggtacaatccagatgaggtttgttgggggtctttgcaactcaagagagatgttccacaaagtccattcacagtttgcaaactattgacggaccttgatggggagttcgtttat
| 3 | 6 | 0.7 | 0 | 288 |
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|
50 | 9,736 | 289 |
LC494711.1
|
Prunus mume
|
Plum pox virus
|
Plum pox virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
LC494711.1 |Plum pox virus strain M isolate K2 genomic RNA, nearly complete genome||Plum pox virus||2021-03-27T00:00:00Z|Research Division, Plant Pathology Section; 1-16-10, Shin-yamashita, Nakaku, Yokohama, Kanagawa 231-0801|Japan|Oya,H., Fujiwara,Y., Kasukabe,R., Motokura,Y.|K2|Plum pox virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9736|GenBank||||Japan:Kanagawa, Kawasaki|Japan||Prunus mume||2017||
|
agtctgcctaattggatcaaactttcaaacaaagagcatatccagcaccatgtcagaaacaagtgccacatatcctgttgacaacagtcacttttggaagcactggatcagcacgaaggacggtcattgtggactgcctatcgtaagtactcgagatgggagtattcttgggctgcacagtcttgcaaattcaacgaatacgcaaaatttctatgcagcatttcctgacaactttgagaccatatacttgtcaaaccaggataatgacaactggataaaacaatggcggtacaatccagatgaggtttgttgggggtctttgcaactcaagagagatgttccacaaagtccattcacagtttgcaaactattgacggaccttgatggggagttcgtttataatcagtccaaaacaacacattggcttcgggacaagttagaaggaaatttgaaagcagttggagcctgtcctggacaattggtgacaaaacatgttgtgaaaggtaaatgcactctctttgagacatacttgctgacacacccagaagagcatgaattctttcgacctttgatgggagcgtaccagaaaagtgctttgaataaggatgcgtatgttaaagatctgatgaaatactcgaagccaattgtcgttggagctgttgactgtgagcaattcgagcgcgctgtcgatgttgttatctcgatgttgatttcaaaaggtttcgaagaatgcaactatgtcactgacccggatgacatattctctgcacttaacatgaaagcagcagttggtgctctgtacagtggcaagaagagggattatttcaaagatgcttctgagcaagacaaggaggattttataaaagctagttgcaaacgcctattcatggggaagaaaggagtgtggaatggttctttaaaggctgaattgcgaccaaaagagaaagtggaagcaaacaagactcgctctttcacagcagcaccaatcgacactcttcttgggggaaaagtgtgtgtcgacgacttcaacaatcaattctacagcttgaatttgcactgcccatggagcgttggaatgacaaaattcagaggtggttgggacaagttactcagagctttaccagatgggtggatctattgcgatgctgacggttctcaattcgatagctctctctcaccatatttaatcaacgcagttctcaacatccgtctggccttcatggaagagtgggatattggcgagcagatgctttcgaacttatatacggagattgtttacacgccaatcgcgactccagatggaacaattgtgaagaagttcaagggcaataatagtggtcagccttcgacggttgttgacaacacactcatggttattctagcaatgacttactcacttttgaagcttggctatcatccagacacacacgagtgtatttgccggtactttgtgaatggtgacgatttagtccttgcagtgcatccagcgtacgagagcgtgtatgatgaactccaagaacacttttcacaacttggactgaactacacattcacaacaaagactgagaacaaggaggaactgtggtttatgtctcataggggtgtattgttcgaggacatgtacattcccaaactggaacccgagagaatcgtgtcaatacttgagtgggacagatcaaatgaaccaattcacagactggaggcaatttgtgcatcaatggtcgaggcgtggggctacaaagaactgctgagagaaattcgaaaattttacagttgggttcttgagcaggcaccatacaatgctctttcaaaagacgggaaagccccgtacatagcagagacggcactcaggaaactctatactgattctgaagcatctgagacggaaattgagagatacctcgaagcattttacaatgatgttgatgatagctttgactccaacattgttatacaccaggctgatgaaaaggaggacgatgaagaagtggatgcaggaagacctactgtggtaactgcaccggcagcaactgtggcaacgactcaac
| 4 | 6 | 0.8 | 0 | 289 |
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] |
|
51 | 7,161 | 291 |
NC_001574.1
|
Cacao swollen shoot virus
|
Cacao swollen shoot virus
|
Caulimoviridae
|
Badnavirus
|
dsDNA-RT
|
NC_001574.1 |Cacao swollen shoot virus, complete genome|GCF_000844305.1|Cacao swollen shoot virus||1993-08-04T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Hagen,L.S., Jacquemond,M., Lepingle,A., Lot,H., Tepfer,M.||Cacao swollen shoot virus|Badnavirus|complete|Caulimoviridae|dsDNA-RT|7161|RefSeq|||1||||||||PRJNA485481
|
tggtatcagagcaaggttaaacatggtcatgtccggctaaaaacctagtgttaggttcggggaaagaggtctactgtgtgtttcaaatatccatttgttattatccaaacagtgtctgttccttgtgtttaggatggaaacctgaggttgcgaactacgtgttcaaaggagtgatcatttcaaaaggaatgtcattctaactatcgtatgctctagacttgccctgttatagcaacagaggatcctgtctatcagaaaatagtttgaacaattccgatgatctctcatactttaggtataacaacgccacgtataaggagctaattcttttgtaaaagacgtaacccagaagagagtacccagagaggggaagacttggggagaaggtgaacagaagagagagcttactgtacctggtactgttataggaagattttgttatgtccagtcgctgggagaatagtatacaagagtggtatgagaagtcacacacagcaaaccttgagtaccttgacctagcatctactagtaaagtgaccaacaaccagttagcacataaccttgcagtaacctttgatagagtaaatttaggtaaccgagtttttattaaaaacctgaagcagattcaagagtctattcttgaattaaacacccgtgttgatactatagaagtagctctaaggaggttaaccaagaccttcagagaaagcaaaccacttaccgaaagtgaagtccgtaagttggttgaagaaattgctcaacaacctaagatcgtcgagaaacaagcactcgagatctctcaacaacttgagcagaaactagagaaggtggaaaagctcttgcacaaacttgaccagtgggttggtcaatgactgatagcccagcctatcaagaagctttaaaggaagcagaaaaggttgacccaccagcagttgggataacaacctccaccggagtaacagcggttcaagggtttaaaaccgttattaagcagaacaacgttcagatctgcttactcgctgtcatagcagataaactagaagagctgatacaggatcagaagaaggccaggaaggataaggcaaaggaagttgccattccagaagacttaatcacaaaactccaaggattatctattcaggagaaaggagaggcaaaagtcacaagaaaacccgagccaaaaggaacgctgtttggattcaaagatccttacaagatcctagcagcagaaaaggctaagatcacacttaagcctgtgaaagagtagaaagatgagtcgagcacgaccgcaacacccagttcctagtgtgactacaaccactagtgagcaaaacagggaaggacctctatacgaggatcagatcagagactaccgaagaggacaaagaaggatctttaaccttcgaagaagagccagaaggttaagaagatcaatgatggggtctagatatcaagagaccctagaacaagaaatagatccacagacaacactgaggttgtccatgcaagaacgagcaagactagtaccagctgaggtactgtacagatccaggcgagacactgttcatcacagagtctacacacaccgatctgaagagtcagtcctatgtgttggcggaagccaagtggatagggcgtttatacagcctgaaagtctggaacaactccaaaggacaggaatgtcctttattcatatcggaattctgcaagtgaggattcagattctgcaccgacaagaagaaggcaccatggccttggtagtattcagggataacagatggtcgggagatcagtctattttcgctcaaatggaaatagacctaacaaaaggaagccaattggtgttcgttataccagacaccatgatgaccatcggagactttgcccggaacgtacaactatccatcctcacaagagggtatgaaaattggcagaacggagaagccaatctcctgataacacgtggcatgacagggcgactgtccaacactcccaatgtcgcctttgcttaccaaattgccagcgcaacagattacttggcaagtcac
| 0 | 5 | 0.2 | 0 | 291 |
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] |
||
51 | 7,161 | 293 |
NC_001574.1
|
Cacao swollen shoot virus
|
Cacao swollen shoot virus
|
Caulimoviridae
|
Badnavirus
|
dsDNA-RT
|
NC_001574.1 |Cacao swollen shoot virus, complete genome|GCF_000844305.1|Cacao swollen shoot virus||1993-08-04T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Hagen,L.S., Jacquemond,M., Lepingle,A., Lot,H., Tepfer,M.||Cacao swollen shoot virus|Badnavirus|complete|Caulimoviridae|dsDNA-RT|7161|RefSeq|||1||||||||PRJNA485481
|
ggaactgagctcagtgaaaagttatggatgaagatgccaccagaactagggcatcgaatgaaagaagcatttcaaaaggagtattcaggcaatgaagtaggagtcttcccgcgcatcttgtttgcctacagatatctggagcaagagtgtaaagatgcagcttttaagagaagcctgaagtcattaagcttctgcaaagacatgccattaacaggatactatgataaaacctccaagtatggcatgagaaagtcaagaacctataaaggaaaaccacatgcatcacatgcaagggtggagaagaggaagcacttgatcagaaataaaaagtgcaaatgttatctctgcggggatgaaggacactttgcccgggaatgccccaatcagaggagagatgtcaagagagtagccatttttgaaggaattgatcttcctgaaggctttgatatcgtctcagtagaagaaggagaagaagagtcagatgctatttatagcatatctgaaaatgaagacggagaacttgacactgaagtagtccatgagaaagtcttcatgatgagagaagaagaccagtcctattggttaggaaagacaaaccattggacggctatggtgcgagtcagcagtcagcaatatcactgcatgcaccaatgggagcacaataaagaaatattagtggtggcccacatcaactgccacttctgtaagcaacccactcagttaaggagtcgaatacactgtcccacgtgtcaactcaccagttgcttcatgtgtgccccaatatactgcaatatgatagtccagcagcagcctaaaccaccagtaccgtttaatactcacacactgctccaacaacaagcggcttatatccagtggttggaaaaagaaaatcagcggttaactgaagccgttgaattctataaaaaggaggctgaagaattaaggctcgaaagagacttagagcaagatagaaggagtctggaacctacgttgttagacaaaggaaagaaggttcagattcttgatccagatgaagatcagcacacagcgtatcttgaagaagataccatcagccgtgttatcggccatactgtggaacaacaagaggttagaaagcccgttaaaaagggaaacatgctctataacctcgatgtggtgttacatatcccagaggtaggaagacctatcaaagtcaaagcaattctagacactggagcaaccacatgctgtataaacatcaactctgtaccacaaacagcaattgaacagaacacttttctggtacaattccgaggcataaattccacgcaatctgtggataagaaactcaaatatgggaggatgactatcagcaatcaccagttcagaatcccgtactgttatgcctttcctctatcccttggtgatggaatagagatgatcctagggtgtaatttcatccgtgggatgtatggcggtttgcgtattgaaggtcacacaatcaccttctacaaaaatgtcactacaatccaaacccgccttgctgccgtaatggttggtggtacaaccgcttctgagttagggggaggggaggagtccaaatccgattctgaatccatgtttgacctctcagaaacagaagaatttgactcagaaacccaccagcagattgtgagtcatgttgcagcccaagcccaacaacaaaaattggatccaaaactccaacaactaatggtccaacttcaggatcagggctttattggggaaaatcctatgcaacattgggctaaaaacaagatcctatgtcgactagatatcaagaatcctgatcttataatagaagacaagcccatcaagcatctaacaccggccatggagaaacagttccagaagcacatcaaagcactcctggacattggtgttatcaggcctagtaagtcaaaacacaggactacggccttcattgtggaatcaggcactgttattgatccagtcacgaaaaagactatacacggtaaagaacgtttggtcttcaactacaaacgcctgaacgacaacactgaaaagga
| 2 | 5 | 0.6 | 0 | 293 |
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] |
||
51 | 7,161 | 294 |
NC_001574.1
|
Cacao swollen shoot virus
|
Cacao swollen shoot virus
|
Caulimoviridae
|
Badnavirus
|
dsDNA-RT
|
NC_001574.1 |Cacao swollen shoot virus, complete genome|GCF_000844305.1|Cacao swollen shoot virus||1993-08-04T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Hagen,L.S., Jacquemond,M., Lepingle,A., Lot,H., Tepfer,M.||Cacao swollen shoot virus|Badnavirus|complete|Caulimoviridae|dsDNA-RT|7161|RefSeq|||1||||||||PRJNA485481
|
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| 3 | 5 | 0.8 | 0 | 294 |
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||
52 | 9,081 | 295 |
PP486545.1
|
Macaca mulatta
|
Simian immunodeficiency virus
|
Simian immunodeficiency virus
|
blood
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
PP486545.1 |Simian immunodeficiency virus isolate DEVJ.4NOV15.P72A6.group1, complete genome||Simian immunodeficiency virus||2024-03-22T00:00:00Z|Frederick National Laboratory, AIDS and Cancer Virus Program|USA|Keele,B.F., Immonen,T.T., Fennessey,C.M.|DEVJ.4NOV15.P72A6.group1|Simian immunodeficiency virus|Lentivirus|complete|Retroviridae|ssRNA-RT|9081|GenBank||||USA|USA||Macaca mulatta|blood|||
|
ggaaccaaccacgacggagtgctcctataaaggcgcgggtcggtaccagacggcgtgaggagcgggagaggaagaggcctccggttgcaggtaagtgcaacacaaaaaagaaatagctgtcttttatccaggaaggggtaataagatagagtgggagatgggcgtgagaaactccgtcttgtcagggaagaaagcagatgaattagaaaaaattaggctacgacccaacggaaagaaaaagtacatgttgaagcatgtagtatgggcagcaaatgaattagatagatttggattagcagaaagcctgttggagaacaaagaaggatgtcaaaaaatactttcggtcttagctccattagtgccaacaggctcagaaaatttaaaaagcctttataatactgtctgcgtcatctggtgcattcacgcagaagagaaagtgaaacacactgaggaagcaaaacagatagtgcagagacacctagtggtggaaacaggaacaacagaaactatgccaaaaacaagtagaccaacagcaccatctagcggcagaggaggaaattacccagtacaacaaataggtggtaactatgtccacctgccattaagcccgagaacattaaatgcctgggtaaaattgatagaggaaaagaaatttggagcagaagtagtgccaggatttcaggcactgtcagaaggttgcaccccctatgacattaatcagatgttaaattgtgtgggagaccatcaagcggctatgcagattatcagagatattataaacgaggaggctgcagattgggacttgcagcacccacaaccagctccacaacaaggacaacttagggagccgtcaggatcagatattgcaggaacaactagttcagtagatgaacaaatccagtggatgtacagacaacagaaccccataccagtaggcaacatttacaggagatggatccaactggggttgcaaaaatgtgtcagaatgtataacccaacaaacattctagatgtaaaacaagggccaaaagagccatttcagagctatgtagacaggttctacaaaagtttaagagcagaacagacagatgcagcagtaaagaattggatgactcaaacactgctgattcaaaatgctaacccagattgcaagctagtgctgaaggggctgggtgtgaatcccaccctagaagaaatgctgacggcttgtcaaggagtaggggggccgggacagaaggctagattaatggcagaagccctgaaagaggccctcgcaccagtgccaatcccttttgcagcagcccaacagaggggaccaagaaagccaattaagtgttggaattgtgggaaagagggacactctgcaaggcaatgcagagccccaagaagacagggatgctggaaatgtggaaaaatggaccatgttatggccaaatgcccagacagacaggcgggttttttaggccttggtccatggggaaagaagccccgcaatttccccatggctcaagtgcatcaggggctgatgccaactgctcccccagaggacccagctgtggatctgctaaagaactacatgcagttgggcaagcagcagagagaaaagcagagagaaagcagagagaagccttacaaggaggtgacagaggatttgctgcacctcaattctctctttggaggagaccagtagtcactgctcatattgaaggacagcctgtagaagtattactggatacaggggctgatgattctattgtaacaggaatagagttaggtccacattataccccaaaaatagtaggaggaataggaggttttattaatactaaagaatacaaaaatgtagaaatagaagttttaggcaaaaggattaaagggacaatcatgacaggggacaccccgattaacatttttggtagaaatttgctaacagctctggggatgtctctaaattttcccatagctaaagtagagcctgtaaaagtcgccttaaagccaggagaggatggaccaaaattgaagcagtggccattatcaaaagaaaagat
| 0 | 6 | 0.2 | 0 | 295 |
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] |
52 | 9,081 | 296 |
PP486545.1
|
Macaca mulatta
|
Simian immunodeficiency virus
|
Simian immunodeficiency virus
|
blood
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
PP486545.1 |Simian immunodeficiency virus isolate DEVJ.4NOV15.P72A6.group1, complete genome||Simian immunodeficiency virus||2024-03-22T00:00:00Z|Frederick National Laboratory, AIDS and Cancer Virus Program|USA|Keele,B.F., Immonen,T.T., Fennessey,C.M.|DEVJ.4NOV15.P72A6.group1|Simian immunodeficiency virus|Lentivirus|complete|Retroviridae|ssRNA-RT|9081|GenBank||||USA|USA||Macaca mulatta|blood|||
|
gatttgctgcacctcaattctctctttggaggagaccagtagtcactgctcatattgaaggacagcctgtagaagtattactggatacaggggctgatgattctattgtaacaggaatagagttaggtccacattataccccaaaaatagtaggaggaataggaggttttattaatactaaagaatacaaaaatgtagaaatagaagttttaggcaaaaggattaaagggacaatcatgacaggggacaccccgattaacatttttggtagaaatttgctaacagctctggggatgtctctaaattttcccatagctaaagtagagcctgtaaaagtcgccttaaagccaggagaggatggaccaaaattgaagcagtggccattatcaaaagaaaagatagttgcattaagagaaatctgtgaaaagatggaaaaggatggtcagttggaggaagctcccccgaccaatccatacaacacccccacatttgctataaagaaaaaggataagaacaaatggagaatgctgatagattttagggaactaaatagggtcactcaggactttacggaagtccaattaggaataccacaccctgcaggactagcaaaaaggaaaagaattacagtactggatataggtgatgcatatttctccatacctctagatgaagaatttaggcagtacactgcctttactttaccatcagtaaataatgcagagccaggaaaacgatacatttataaggttctgcctcagggatggaaggggtcaccagccatcttccaatacactatgagacatgtgctagaacccttcaggaaggcaaatccagatgtgaccttagtccagtatatggatgacatcttaatagctagtgacaggacagacctggaacatgacagggtagttttacagtcaaaggaactcttgaatagcatagggttttctaccccagaagagaaattccaaaaagatcccccatttcaatggatggggtacgaattgtggccaacaaaatggaagttgcaaaagatagagttgccacaaagagagacctggacagtgaatgatatacagaagttagtaggagtattaaattgggcagctcaaatttatccaggtataaaaaccaaacatctctgtaggttaattagaggaaaaatgactctaacagaggaagttcagtggactgagatggcagaagcagaatatgaggaaaataaaataattctcagtcaggaacaagaaggatgttattaccaagaaggcaagccattagaagccacggtaataaagagtcaggacaatcagtggtcttataaaattcaccaagaagacaaaatactgaaagtaggaaaatttgcaaagataaagaatacacataccaatggagtgagactattagcacatgtaatacagaaaataggaaaggaagcaatagtgatctggggacaggtcccaaaattccacttaccagttgagaaggatgtatgggaacagtggtggacagactattggcaggtaacctggataccggaatgggattttatctcaacaccaccgctagtaagattagtcttcaatctagtgaaggaccctatagagggagaagaaacctattatacagatggatcatgtaataaacagtcaaaagaagggaaagcaggatatatcacagataggggcaaagacaaagtaaaagtgttagaacagactactaatcaacaagcagaattggaagcatttctcatggcattgacagactcagggccaaaggcaaatattatagtagattcacaatatgttatgggaataataacaggatgccctacagaatcagagagcaggctagttaatcaaataatagaagaaatgattaaaaagtcagaaatttatgtagcatgggtaccagcacacaaaggtataggaggaaaccaagaaatagaccacctagttagtcaagggattagacaagttctcttcttggaaaagatagagccagcacaagaagaacatgataaataccatagtaatgtaaaagaa
| 1 | 6 | 0.3 | 0 | 296 |
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] |
52 | 9,081 | 297 |
PP486545.1
|
Macaca mulatta
|
Simian immunodeficiency virus
|
Simian immunodeficiency virus
|
blood
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
PP486545.1 |Simian immunodeficiency virus isolate DEVJ.4NOV15.P72A6.group1, complete genome||Simian immunodeficiency virus||2024-03-22T00:00:00Z|Frederick National Laboratory, AIDS and Cancer Virus Program|USA|Keele,B.F., Immonen,T.T., Fennessey,C.M.|DEVJ.4NOV15.P72A6.group1|Simian immunodeficiency virus|Lentivirus|complete|Retroviridae|ssRNA-RT|9081|GenBank||||USA|USA||Macaca mulatta|blood|||
|
acagtcaaaagaagggaaagcaggatatatcacagataggggcaaagacaaagtaaaagtgttagaacagactactaatcaacaagcagaattggaagcatttctcatggcattgacagactcagggccaaaggcaaatattatagtagattcacaatatgttatgggaataataacaggatgccctacagaatcagagagcaggctagttaatcaaataatagaagaaatgattaaaaagtcagaaatttatgtagcatgggtaccagcacacaaaggtataggaggaaaccaagaaatagaccacctagttagtcaagggattagacaagttctcttcttggaaaagatagagccagcacaagaagaacatgataaataccatagtaatgtaaaagaattggtattcaaatttggattacccagaatagtggccagacagatagtagacacctgtgataaatgtcatcagaaaggagaggctatacatgggcaggcaaattcagatctagggacttggcaaatggattgtacccatctagagggaaaaataatcatagttgcagtacatgtagctagtggattcatagaagcagaggtaattccacaagagacaggaagacagacagcactatttctgttaaaattggcaggcagatggcctattacacatctacacacagataatggtgctaactttgcttcgcaagaagtaaagatggttgcatggtgggcagggatagagcacacctttggggtaccatacaatccacagagtcagggagtagtggaagcaatgaatcaccacctgaaaaatcaaatagatagaatcagggaacaagcaaattcagtagaaaccatagtattaatggcagttcattgcatgaattttaaaagaaggggaggaataggggatatgactccagcagaaagattaattaacatgatcactacagaacaagagatacaatttcaacaatcaaaaaactcaaaatttaaaaattttcgggtctattacagagaaggcagagatcaactgtggaagggacccggtgagctattgtggaaaggggaaggagcagtcatcttaaaggtagggacagacattaaggtagtacccagaagaaaggctaaaattatcaaagattatggaggaggaaaagaggtggatagcagttcccacatggaggataccggagaggctagagaggtggcatagcctcataaaatatctgaaatataaaactaaagatctacaaaaggtttgctatgtgccccattttaaggtcggatgggcatggtggacctgcagcagagtaatcttcccactacaggaaggaagccatttagaagtacaagggtattggcatttgacaccagaaaaagggtggctcagtacttatgcagtgaggataacctggtactcaaagaacttttggacagatgtaacaccaaactatgcagacattttactgcatagcacttatttcccttgctttacagcgggagaagtgagaagggccatcaggggagaacaactgctgtcttgctgcaggttcccgagagctcataagtaccaggtaccaagcctacagtacttagcactgaaagtagtaagcgatgtcagatcccagggagagaatcccacctggaaacagtggagaagagacaataggagaggccttcgaatggctaaacagaacagtagaggagataaacagagaggcggtaaaccacctaccaagggagctaattttccaggtttggcaaaggtcttgggaatactggcatgatgaacaagggatgtcaccaagctatgtaaaatacagatacttgtgtttaatacaaaaggctttatttatgcattgcaagaaaggctgtagatgtctaggggaaggacatggggcagggggatggagaccaggacctcctcctcctccccctccaggactagcataaatggaagaaagacctccagaaaatgaaggaccacaaagggaaccatgggatgaatgggtagtggaggttctggaagaactgaaagaaga
| 2 | 6 | 0.5 | 0 | 297 |
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] |
53 | 6,284 | 300 |
ON624276.1
|
Bos taurus
|
Bovine astrovirus
|
Bovine astrovirus
|
feces
|
Astroviridae
|
Mamastrovirus
|
ssRNA(+)
|
ON624276.1 |Bovine astrovirus strain BoAstV26/2021/CHN, complete genome||Bovine astrovirus||2023-02-20T00:00:00Z|Heilongjiang Bayi Agriculculrual University, Laboratory for the Prevention and Control of Swine Infectious Disease|China|Wu,H.||Bovine astrovirus|Mamastrovirus|complete|Astroviridae|ssRNA(+)|6284|GenBank||||China|China||Bos taurus|feces|2021||
|
gatagtattgttgagtttagaggtttaatgaaaatgtctctctacatcaaccgtgccgatgaggcgatagcctcaagtgacagaacccagataacgccgcgttttgacgcccgcgagtggtttgatgagcttcgtaagatcgggtctaacataccgtggtacatcacataccagccacggatgtttttctacccaactctcaaacctgaccgcgtcttaactgcgagcactgtctgtgagggggaatggcgcacgttcgtcctcgatgtggaacacggcctccacaaagcgatagaggtcaaccacgtcccggaccaccagccaaccatccttgctgccgccctgatgcacgacagatctgagaaggcacgtgaaatatccgacttgaaacttgagaacgagatccttcgagggcagctagcagtgtaccgacaggagcacaaaaccacaccacgctttgctctaagctggaccaccctgtttgccctagtgtttctcggcttctcacttttctggcactccgcacacgggttgacaacgacatccaccacagaatcagtcaaccccatggaaatgcttagacttaacatctggctcgacaatttcgtgagcgaggccaagcgcatcatccacacccataggaccacggttatggatgcagtccgcacatcaccttcctggcttattgctagcacagtgatcccccacctctggactatagtgactatagtgcttggcattatgtccgtttataggtcggagcggagggtgctctcaatctgcttcctggctgccgcaaccatgagtggtggggactggctcttcctttccagcgcgtcttcgcagacagtcgttagtgcaatctgccagatcacctgcgtcttggtctcccacatcgacccgcttggagcgatttgtctctcctcacttattatgtttgggacattcctggccagtatgtgttgcaccagcactgagttcatacagcactctagagctgcgtcaatcaatactgcagttcttgtggtgtcgattgtgcttcgtaccatgcagttgccagccatgccaattgcccttgcgcttgctgcagtgcgggcctacaccatcatcacaacacctacaggcgcgacaattgaggtccgcagtgatgatgggaaagtggtatccaaagacccagtcaagcctgggatactcttcaggttcaagcaggggctgaggaagagatttgcacaactgaggtcatccatgccaccgctcgtgcgcgtcaacccaacagcggtagttcgtgttgagacccccgacggtattgggacagggtttttctgtgcaaactacattgtcactgccggacatgtgcttggtccccacaaggtggcatccatctgcattggagttgcaaagtatcagaccaccctggtgcgccacgttgagggcaaggatattgctctcttgaagatcccccaacaggtgcagaactacccacgtttgaggattgcagcaaagatagagacggagtgggtctgcatctactcaccagacggggagggtgcgattgtccaatcagtggttcctggtcaccaagttgatgattgcattgactatgctgttcccaccagggatggtatgtctggtgcaccacttgtcaatccagatggtcgagtcatggcagtccacctcactaacaccggctttacaggtggagcccagatcctgacccaagcagatgtcaccgaccctccaaagagcagtaccaacgaggacaagctcaagcaggaaattgaggagctaaagaaacagcttgccaaatgcaaccagtcgagtacccaggtagacatcgttgggctagttcgcgctgcaatggcccgcgagatgaccatcctgcgagaagagctcaataaggagctgagatccgcccctcagtatgaccaggctaagggcaagacaaaaatgaaggccaggaggctccgcatggctggctccaaaccccgccgccagcgcggacctgtcttcactgaggaagagtacaatcgtctcctcgagtcaggact
| 0 | 4 | 0.2 | 0 | 300 |
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] |
53 | 6,284 | 301 |
ON624276.1
|
Bos taurus
|
Bovine astrovirus
|
Bovine astrovirus
|
feces
|
Astroviridae
|
Mamastrovirus
|
ssRNA(+)
|
ON624276.1 |Bovine astrovirus strain BoAstV26/2021/CHN, complete genome||Bovine astrovirus||2023-02-20T00:00:00Z|Heilongjiang Bayi Agriculculrual University, Laboratory for the Prevention and Control of Swine Infectious Disease|China|Wu,H.||Bovine astrovirus|Mamastrovirus|complete|Astroviridae|ssRNA(+)|6284|GenBank||||China|China||Bos taurus|feces|2021||
|
cagatggtcgagtcatggcagtccacctcactaacaccggctttacaggtggagcccagatcctgacccaagcagatgtcaccgaccctccaaagagcagtaccaacgaggacaagctcaagcaggaaattgaggagctaaagaaacagcttgccaaatgcaaccagtcgagtacccaggtagacatcgttgggctagttcgcgctgcaatggcccgcgagatgaccatcctgcgagaagagctcaataaggagctgagatccgcccctcagtatgaccaggctaagggcaagacaaaaatgaaggccaggaggctccgcatggctggctccaaaccccgccgccagcgcggacctgtcttcactgaggaagagtacaatcgtctcctcgagtcaggactcacgccggacgagatccgcgacatggtagacagactctacgacaaggaggttgctggctttccggagtgggacccaatggatgacgggtatgaccccaatgaagattggatttttgagtcagactccaactttggccagagacaagtgaaggtgccatcgttcaaccagtacatggagagggattatgatgtgaaggacgtcgagaatatgctacgctccctcacttgcgcggatgtcgatgctattgggcctctctacccaataactgcccactgcatcggctccccactatgccctgccatgctttgtctcgtagacaggtatgccgcatctagaggtctgtctccaccatcatttggccttccctacacccagcgtcgggtgccaaaaaacgggaagcggggccagaaccagcggccccagaaatccacaaactagatgcctgggagacactgcgcctaccaccatcaaggcgcgttgtgcccgacgactacccagtcgtctgcaatctaccgataaacagacctatctatgaggaaaaattggttgacgacccactgctcggtcttttgccaccatgtgacccagacctcccttttgcacctgctgtgtggggcccgcaagcatacaccaagtcgttcgagaagttcacatatgcagaaccatcacgcttctgggagctctatcccgaggagtgcgcctttgccgacaagcagtggcgcaagcactacaacttcctcgaggatacccgagtcatgcacataacagcaactgaaaagaacattgactcaacaccagggtacccgaaatgtgagctccatgagagcgagcgtgactatctcgaatgcaatggctgggccccatacatccgcgaattcaaacgcgttgattccggcgctcgcccccgcgtgctctggtactgcttcttgaagaaggagcagctcaagaaggagaaaatcaaggatggcgacatccgccaaataatatgtccagatgtgatttactcccgcatcggggccgctcttgagcaacaccagaacaatcttatgaaaaagaacacagacaccagcagcgggcagtgcgggtggacccccttctttggtggatttgccgagaagatgcgtcggctcgacaagaataagatcattgaattcgattggaccaggttcgatgggactatcccacgcgcactactgaagcatataaaagacctccgctgggagaagattaacaagcaacacagagagaggtacaggcacattcatgagtggtacgtacagaacctgcttaccagatatgtgcttatgccaacaggtgaggtgaccatccaacggaggggcaatccctctggtcagatttccaccacgatggacaacaacatggtcaattactggctccaggcctttgaattcgcctacctcaatagggggaaggacatcgagggcttgtggaatgaatatgacaccatcgtgtatggagacgacaggctcacctcgtcccctagtgtcccagaggactacgtccagcgcgtagtcaccatgtacaaggaggtttttggcatgtgggtgaagcctgagaaggtcaaagtcacagaatccatcattggtgcatccttctgcggcttcacagtcggcaagaactaccagc
| 1 | 4 | 0.5 | 0 | 301 |
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] |
53 | 6,284 | 303 |
ON624276.1
|
Bos taurus
|
Bovine astrovirus
|
Bovine astrovirus
|
feces
|
Astroviridae
|
Mamastrovirus
|
ssRNA(+)
|
ON624276.1 |Bovine astrovirus strain BoAstV26/2021/CHN, complete genome||Bovine astrovirus||2023-02-20T00:00:00Z|Heilongjiang Bayi Agriculculrual University, Laboratory for the Prevention and Control of Swine Infectious Disease|China|Wu,H.||Bovine astrovirus|Mamastrovirus|complete|Astroviridae|ssRNA(+)|6284|GenBank||||China|China||Bos taurus|feces|2021||
|
tggttcctcaagcgtgttctcaatgcacctgttaatggtgcggcggttgtctttgatgtctttccatcgatgtcagatgcccaaaacaaccgctacatatactgtgaccaaagcaacttccaggctgttacaattgatacagttcagtaccagcaggtcacaccagggaacacagggcttgcatctcagtcattcacggctaggggatcgtcttctggtcaaacaggatatagggttgactcgctgcgtgttctttatagcggtgagttactccccgcgcagccagtgtggatacagaagaagaatgtcacctcttctgataggggcattaagtttaaggcaggtaaccagaggataacaacctacaatgtgtttgaggcacaggtcgatgccccggagcccacagatggcgtccctgtgtatctccagtctagccgtgaagataaggttggaattgccgtggcgggtactcatgccgacctggctgatagtagagaggtacacctcaccagtatacttttctttgcaacattatctcaggcctacaattatgatgccagcaatgatggcgtgtttattcgcgcagagctgaagcacgaaacatacacgcagaagctcgtcaccgggtcgaatgatatctccacccataggatccagattactgcaggcaagtggtatgttgcacagttcttttctgacggcacctggacacgtgcattcaacatcggtggcgttcctgcgtatgtacccgaacgcgcatggactaacacccttcaggagtatcccatcactgccaccgagggcgacatcaacggcgggttccctcttggctaccttgcgaggttgtatgtcgccccacttgccaccaatgacgtgacggtccagcagtcacgcgaagcggatgcgatccacgctctggctgccaccctcgatctcgggcctgatgaatattatgacatgccacctcttgaggaagatgaggatgcagatgatgaagatgacgaggacgctatagatgccgaccttgagctcggtcccatggatgattatgatgacccaccgatgtcccggttggtggttcaccctgatgtgcagaaaacctatgagatcctttgtgagctgcacccagaacgggaagcccgcttggcagcaaatcggctgaaaccaagcgatgagtacagcgaattcaccaggctgtaccacgatgcgctagttgatggcctatcacctagggcagccagagcttatgctctggggctctaggatggcgtgcgcatcgtgcattctaatcagtttttcagtttcatttgtgatttgattagcataggtgaaggggaaac
| 3 | 4 | 1 | 0 | 303 |
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54 | 1,259 | 304 |
NC_014746.1
|
Betasatellite agerabueaense
|
Betasatellite agerabueaense
|
Tolecusatellitidae
|
Betasatellite
|
ssDNA
|
NC_014746.1 |Ageratum leaf curl Buea betasatellite, complete genome|GCF_000888815.1|Betasatellite agerabueaense||2010-12-03T00:00:00Z|to the INSDC. Nkeabeng Leke W., SLU, Department of Plant Biology and Forest Genetics, Box 7080, SE-750 07|Sweden|Leke,W.N., Brown,J.K., Ligthart,M.E., Sattar,N., Njualem,D.K., Kvarnheden,A., Nkeabeng Leke,W.|SatB33|Betasatellite agerabueaense|Betasatellite|complete|Tolecusatellitidae|ssDNA|1259|RefSeq|||1|Cameroon|Cameroon||||||PRJNA485481
|
accgtggcgaccggtgtcaaaagtgggtcccaccatgacatatgatgacgtagcctttgcttattttgggcttaattgggctggcccaattaagttatttcgtagaaaccatgagcccaggtctattattataatcttaattatttatttcataatttataacaatatataattatccattacattacacggaggtttttgtcttaattctatgtggttctataatttgcatattaaatatattctcattctctgccataaccatatcaattgcctccactatgtcttcgtgcctcaattctctatagttgagctcattgaaaatgagctttatggcgttagcaatttgttcctctgttccgttgaagtcgaatggaatgatgacttcttcgaatgagtatggaatttgatatgtagtataactcatatatgcttccttagttgctgttacctgtattttacaattgattctctctccttgaacatatacatttattacaaatgtcacccctttgttgttcttgtatttgatagtcatgtttgtatgatattgctatttgtgtaaatcaatttatagacctaatatctaaatatctaattcattcatggtgatgaattaaacacgtatgtcatctgattgccgttcaggtgcctgtctatattatcttatatggactagtctttatctgtactatgctttgccatcaaagctaattttacgaaaaaaaaaaaataatctctttttattcttgatgacaacaatgatgaacaaacaaaacacacctcatacaaactatcatttcatattatgaaatggtggcaccgcagcgaaaaaaaaaacccaacctaccctactacaaataattcatactgaagtctgatccatgatccaatgaaaaagaataaaaaaataattttaaatttatgtcttacacagactgggtgactgacgctgacgtgaccccatatatgtgtacatacatatacacatatatatgttacatttatgttattacacgtgcatatctggtgctatgatctgtgtacttggacgttgagtggaggaagagtcgcactgaaagcgcggagtgagtgcgcagtgcgcgaacacaccaatatggcggtcgatcaatcgctatctcgcgttgcagacgacggatctttcaggtctcctccatctgaacatgtgaaatgggcaaaccgctagctccgaagagccttgcgcatacgccggaatgcagggagccacgtataatatt
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||
55 | 7,907 | 306 |
OP751599.1
|
Homo sapiens
|
Human papillomavirus type 16
|
Alphapapillomavirus 9
|
Papillomaviridae
|
Alphapapillomavirus
|
dsDNA
|
OP751599.1 |UNVERIFIED: Human papillomavirus type 16 isolate Asymp_61, complete sequence||Human papillomavirus type 16||2022-11-27T00:00:00Z|NHS Lothian, SHPVRL||Guerendiain,D.|Asymp_61|Alphapapillomavirus 9|Alphapapillomavirus|complete|Papillomaviridae|dsDNA|7907|GenBank||||United Kingdom|United Kingdom||Homo sapiens||2016||
|
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|
55 | 7,907 | 307 |
OP751599.1
|
Homo sapiens
|
Human papillomavirus type 16
|
Alphapapillomavirus 9
|
Papillomaviridae
|
Alphapapillomavirus
|
dsDNA
|
OP751599.1 |UNVERIFIED: Human papillomavirus type 16 isolate Asymp_61, complete sequence||Human papillomavirus type 16||2022-11-27T00:00:00Z|NHS Lothian, SHPVRL||Guerendiain,D.|Asymp_61|Alphapapillomavirus 9|Alphapapillomavirus|complete|Papillomaviridae|dsDNA|7907|GenBank||||United Kingdom|United Kingdom||Homo sapiens||2016||
|
aagttgtagaccctgcttttataaccactcccactaaacttattacatatgataatcctgcatatgaaggtatagatgtggataatacattatatttttctagtaatgataatagtattaatatagctccagatcctgactttttggatatagttgctttacataggccagcattaacctctaggcgtactggcattaggtacagtagaattggtaataaacaaacactacgtactcgtagtggaaaatctataggtgctaaggtacattattattatgattttagtactattgatcctgcagaagaaatagaattacaaactataacaccttctacatatactaccacttcacatgcagcctcacctacttctattaataatggattatatgatatttatgcagatgactttattacagatacttctacaaccccggtaccatctgtaccctctacatctttatcaggttatattcctgcaaatacaacaattccttttggtggtgcatacaatattcctttagtatcaggtcctgatatacccattaatataactgaccaagctccttcattaattcctatagttccagggtctccacaatatacaattattgctgatgcaggtgacttttatttacatcctagttattacatgttacgaaaacgacgtaaacgtttaccatattttttttcagatgtctctttggctgcctagtgaggccactgtctacttgcctcctatcccagtatctaaggttgtaagcacggatgaatatgttgcacgcacaaacatatattatcatgcaggaacatccagactacttgcagttggacatccctattttcctattaaaaaacctaacaataacaaaatattagttcctaaagtatcaggattacaatacagggtatttagaatacatttacctgaccccaataagtttggttttcctgacacctcattttataatccagatacacagcggctggtttgggcctgtgtaggtgttgaggtaggtcgtggtcagccattaggtgtgggcattagtggccatcctttattaaataaattggatgacacagaaaatgctagtgcttatgcagcaaatgcaggtgtggataatagagaatgtatatctatggattacaaacaaacacaattgtgtttaattggttgcaaaccacctataggggaacactggggcaaaggatccccatgtaccaatgttgcagtaaatccaggtgattgtccaccattagagttaataaacacagttattcaggatggtgatatggttgatactggctttggtgctatggactttactacattacaggctaacaaaagtgaagttccactggatatttgtacatctatttgcaaatatccagattatattaaaatggtgtcagaaccatatggcgacagcttatttttttatttacgacgggaacaaatgtttgttagacatttatttaatagggctggtgctgttggtgaaaatgtaccagacgatttatacattaaagactctgggtctactgcaaatttagccagttcaaattattttcctacacctagtggttctatggttacctctgatgcccaaatattcaataaaccttattggttacaacgagcacagggccacaataatggcatttgttggggtaaccaactatttgttactgttgttgatactacacgcagtacaaatatgtcattatgtgctgccatatctacttcagaaactacatataaaaatactaactttaaggagtacctacgacatggggaggaatatgatttacagtttatttttcaactgtgcaaaataaccttaactgcagacgttatgacatacatacattctatgaattccactattttggaggactggaattttggtctacaacctcccccaggaggcacactagaagatacttataggtttgtaacatcccaggcaattgcttgtcaaaaacatacacctccagcacctaaagagatccccttaaaaaatacactttttgggaagtaaattta
| 3 | 5 | 0.8 | 0 | 307 |
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|
55 | 7,907 | 308 |
OP751599.1
|
Homo sapiens
|
Human papillomavirus type 16
|
Alphapapillomavirus 9
|
Papillomaviridae
|
Alphapapillomavirus
|
dsDNA
|
OP751599.1 |UNVERIFIED: Human papillomavirus type 16 isolate Asymp_61, complete sequence||Human papillomavirus type 16||2022-11-27T00:00:00Z|NHS Lothian, SHPVRL||Guerendiain,D.|Asymp_61|Alphapapillomavirus 9|Alphapapillomavirus|complete|Papillomaviridae|dsDNA|7907|GenBank||||United Kingdom|United Kingdom||Homo sapiens||2016||
|
gccacaataatggcatttgttggggtaaccaactatttgttactgttgttgatactacacgcagtacaaatatgtcattatgtgctgccatatctacttcagaaactacatataaaaatactaactttaaggagtacctacgacatggggaggaatatgatttacagtttatttttcaactgtgcaaaataaccttaactgcagacgttatgacatacatacattctatgaattccactattttggaggactggaattttggtctacaacctcccccaggaggcacactagaagatacttataggtttgtaacatcccaggcaattgcttgtcaaaaacatacacctccagcacctaaagagatccccttaaaaaatacactttttgggaagtaaatttaaaggaaaagttttctgcagacctagatcagtttcctttaggacgcaaatttttactacaagcaggattgaaggccaaaccaaaatttacattaggaaaacgaaaagctacacccaccacctcatctacctctacaactgctaaacgcaaaaaacgtaagctgtaagtattgtatgtatgttgaattagtgttgtttgttgtttatatgtttgtatgtgcttgtatgtgcttgtaaatattaagttgtatgtgtgtttgtatgtatggtataataaacacgtgtgtatgtgtttttaaatgcttgtgtaactattgtgtcatgcaacataaataaacttattgtttcaacacctactaattgtgttgtggttattcattgtatataaactatatttgctacatcctgtttttgttttatatatactatattttgtagcgccagcggccattttgtagcttcaaccgaattcggttgcatgctttttggcacaaaatgtgtttttttaaatagttctatgtcagcaactatagtttaaacttgtacgtttcctgcttgccatgcgtgccaaatccctgttttcctgacctgcactgcttgccaaccattccattgttttttacactgcactatgtgcaactactgaatcactatgtacattgtgtcatataaaataaatcactatgcgccaacgccttacataccgctgttaggcacatatttttggcttgttttaactaacctaattgcatatttggcataaggtttaaacttctaaggccaactaaatgtcaccctagttcatacatgaactgtgtaaaggttagtcatacattgttcatttgtaaaactgcacatgggtgtgtgcaaaccgttttgggttacacatttacaagcaacttatataataatactaa
| 4 | 5 | 1 | 0 | 308 |
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|
56 | 1,076 | 309 |
ON959854.1
|
Musa acuminata
|
Banana bunchy top virus
|
Banana bunchy top virus
|
plant leaf
|
Nanoviridae
|
Babuvirus
|
ssDNA(+)
|
ON959854.1 |Banana bunchy top virus isolate ALYU-29 segment DNA-S, complete sequence||Banana bunchy top virus||2023-11-01T00:00:00Z|INRAE, UMR PHIM (Plant Health Institute of Montpellier)|France|Guyot,V., Ly,N.-S., Trieu,T.-D., Insisiengmay,O., Zhang,T., Iskra-Caruana,M.-L., Pooggin,M.M., Trieu,T.D., Iskra-Caruana,M.L.|ALYU-29|Banana bunchy top virus|Babuvirus|complete|Nanoviridae|ssDNA(+)|1076|GenBank||DNA-S|1|Viet Nam|Viet Nam||Musa acuminata|plant leaf|2018||
|
tattacccccagcgctcgggacgggacatgggctaatggatcatggaataagggcccatcgggcccgttaagatgggttttgggcttatgggctctatccagaagaccaaaaacaggcgggaaacgtcccaaattcaaatttagatagcttgccccgcaagcaaactaaaagtctatatataccagtgtagacatattgttcagataacaaatggcgaggtttccgaagaaatcgatcaagaagaggcgggttgggcgacggaagtatggaagcaaggcggcaaccagtcacgactactcgtcgttaggttcaatattggttcctgaaaataccgtcaaggtatttaggattgagcctactgataaaacattacccagatattttatctggaaaatgtttatgcttttggtgtgcaaggtgaagcccggaagaatacttcattgggctatgattaaaagttcatgggaaatcaaccagccgactacatgtctggaagcaccaggtttatttataaaacctgaacatagccatctggtgaaactggtatgcagtggggaacttgaagccggagtcgcaacagggacatcagatgttgaatgtcttctaagaaagacaaccgtgttgaggaagaatgtaacagaggtggattacttgtatttggcattttattgtagtgctggagttagtattaactaccagaacagaattacatatcatgtatgatatgtttatgtaaacataaacctttgtatggaataatgaccaaataacatacaacacgctatgaaatacaacacgctatgacaaacagggaaaaatgaagaatcgggggttgattggtctatcgtatcgcttaagggccgcaggcccgttgaaatgattctttattaaacaaatatacatgatacggattgttgaaaatataatcaacgatgtataaatacaacagaatgttgtatactaattaaaataatgagaagaaaagaatatttgtgaaggataagcatcagaaccaccactttagtggtgggtcatatgtcccgagttagtgcgccacgtaagcgctggggcttat
| 0 | 1 | 1 | 0 | 309 |
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