index
int64 | seq_len
int64 | id
int64 | name
string | host
string | species
string | organism_name
string | location_in_host
string | family
string | genus
string | molecule_type
string | decribtion_full
string | chunked_seqs
string | relative_position
int64 | number_of_chunks
int64 | percentage_position
float64 | sequence_quality
float64 | __index_level_0__
int64 | input_ids
list | attention_mask
list |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
57 | 3,231 | 311 |
U87742.3
|
Hepatitis B virus
|
Hepatitis B virus
|
Hepadnaviridae
|
Orthohepadnavirus
|
dsDNA-RT
|
U87742.3 |Hepatitis B virus isolate 7983, complete genome|set:U87742|Hepatitis B virus||2001-06-05T00:00:00Z|University of the Witwatersrand Medical School, Department of Medicine (MHRU)||Bowyer,S.M., van Staden,L., Kew,M.C., Sim,J.G., Weitzmann,L.|7983|Hepatitis B virus|Orthohepadnavirus|complete|Hepadnaviridae|dsDNA-RT|3231|GenBank|adw||1||||||||
|
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| 1 | 2 | 1 | 0 | 311 |
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||
59 | 1,020 | 312 |
KF972016.1
|
Anatidae
|
Influenza A virus (A/wild waterfowl/Dongting/C4316/2012(H9N2))
|
Alphainfluenzavirus influenzae
|
feces
|
Orthomyxoviridae
|
Alphainfluenzavirus
|
ssRNA(-)
|
KF972016.1 |Influenza A virus (A/wild waterfowl/Dongting/C4316/2012(H9N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds|set:8c23cd9d5a8a0a5324eff0ffba295f5eedbda5d6|Influenza A virus (A/wild waterfowl/Dongting/C4316/2012(H9N2))||2014-01-20T00:00:00Z|National Institute for Viral Disease Control and Prevention, China CDC, Chinese National Influenza Center||Zhu,Y., Hu,S., Bai,T., Yang,L., Zhao,X., Zhu,W., Huang,Y., Deng,Z., Zhang,H., Bai,Z., Yu,M., Huang,J., Shu,Y.||Alphainfluenzavirus influenzae|Alphainfluenzavirus|complete|Orthomyxoviridae|ssRNA(-)|1020|GenBank|H9N2|7|1|China: East Dongting lake, Yueyang, Hunan province|China||Anatidae|feces|2012-03-01||
|
agcaaaagcaggtagatattgaaagatgagtcttctaaccgaggtcgaaacgtacgttctctctatcgtaccgtcaggccccctcaaagccgagatcgcgcagagacttgaagatgtctttgcagggaagaacaccgatctcgaggctctcatggaatggctaaagacaagaccaatcttgtcacctctgactaaggggattttggggtttgtgttcacgctcaccgtgcccagtgagcgaggactgcagcgtagacgctttgtccaaaatgccctaaatgggaatggagacccaaacaacatggacagggcagtcaaactgtacagaaaactgaagagagagataacattccatggagctaaagaagttgcactcagttattcaaccggtgcacttgccagctgtatgggtctcatatacaacagaatgggaacggtgaccacagaagtggcttttggcctagtgtgtgccacttgtgagcagattgctgattcacagcatcggtcccacaggcagatggtaactaccaccaacccactaatcaggcatgaaaacaggatggtgctggccagcactacagctaaggctatggagcagatggctgggtcgagtgagcaggcagcggaagccatggaggttgctagtcaggctaggcagatggtgcaagcgatgaggactattggaactcaccctagctccagtgccggtctgaaagatgatcttcttgaaaatttgcaggcctaccagaaacggatgggagtgcaaatgcagcgattcaagtgatcctcttgttattgccgcaagtatcattgggatcttgcacttgatgttgtggattcttgatcgtcttttcttcaaatgtatttatcgtcgccttaaatacggtttgaaaagagggccttctacggaaggagtgcctgagtctatgagggaagagtaccggcaggaacagcagagtgctgtggatgttgacgatggtcattttgtcaacatagagctggagtaaaaaactacatgtc
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60 | 11,367 | 313 |
OL943984.1
|
Culex pipiens sensu lato
|
Sindbis virus
|
Sindbis virus
|
Togaviridae
|
Alphavirus
|
ssRNA(+)
|
OL943984.1 |Sindbis virus isolate KYA14MP133/SA, complete genome||Sindbis virus||2022-12-07T00:00:00Z|University of Pretoria, Medical Virology|South Africa|Meno,K.|KYA14MP133/SA|Sindbis virus|Alphavirus|complete|Togaviridae|ssRNA(+)|11367|GenBank||||South Africa: Kyalami|South Africa||Culex pipiens sensu lato||2014||
|
atggagaagccagtagtaaacgtagacgtagaccctcagagtccgtttgtcgtgcaactgcaaaagagcttcccgcaatttgaggtagtagcacagcaggtcactccaaatgaccatgctaatgccagagcattttcgcatctggccagtaaactaatcgagctggaggttcctaccacagcgacgattttggacataggcagcgcaccggctcgtagaatgttttccgagcaccagtatcattgtgtctgccccatgcgtagtccagaagacccggaccgcatgatgaaatatgccagcaaactggcggaaaaagcgtgcaagattacaaacaagaacttgcatgagaagattaaggatctccggaccgtacttgatacgccggatgcagaaacaccatcgctctgcttccacaacgatgttacctgcaacacgcgtgccgagtattccgtcatgcaggacgtgtatatcaacgctcccggaactatctatcatcaggctatgaaaggcgtgcggaccctgtactggattggcttcgacaccacccagttcatgttctcggctatggcaggttcgtaccctgcgtacaacaccaactgggccgacgagaaagtccttgaagcgcgtaacatcggactttgcagcacaaagctgagcgaaggtaggacaggaaaattgtcgataatgaggaagaaggagttgaagcccgggtcgcgggtttatttctccgttggatcgacactttacccagaacacagagccagcttgcagagctggcatcttccatcggtgttccacttgaaaggaaagcagtcgtatacttgccgttgtgatacagtggtgagttgcgaaggctacgtagtgaagaaaatcaccatcagccccgggatcacgggagaaaccgtgggatacgcggttacacataatagcgagggcttcttgctatgcaaagttactgacacagtaaaaggagagcgggtgtcgttccctgtgtgcacgtatatcccggccaccatatgcgatcagatgaccggtataatggccacggatatatcgcctgacgatgcacaaaaacttctggttgggctcaaccagcgaattgtcattaacggtaggactaacaggaacaccaacaccatgcagaattaccttctgccgatcatagcacaagggttcagcaaatgggctaaggagcgcaaggaagatcttgaaaacgagaaaatgctgggtactagagaacgcaagcttacgtatggctgcttgtgggcatttcgcactaagaaagtacattcattttatcgcccacctggaacgcagaccagcgtaaaagtcccagcctcttttagcgcttttccaatgtcgtccgtgtggacgacctctttgcccatgtcgctgaggcagaaattgaaactggcattgcaaccgaagaaggaggaaaaactgctgcaggtctcagaggaattagtcatggaggccaaggctgcttatgaggacgctcaggaggaagccagagcggagaagctccgagaagcacttccaccgttagtggcagacaaaggcatcgaggcagccgcagaagttgtctgcgaagtggagggactccaggcggatatcggagcggcactagttgaaaccccgcgcggtcacgtacggataatacctcaagcaaatgaccgtatgatcggacagtatatcgttgtctcgccgaactctgtgctgaagaatgccaaactcgcaccagcgcatccgctagctgaccaggttaagatcataacacactccggaaggtcaggaaggtacgcggtcgaaccatacgacgctaaagtactgatgccagcaggaggtgccgtaccatggccagaatttctagcactgagtgagagcgccacactagtgtacaacgaaagagagtttgtgaaccgcaaactataccacattgccgtgcatggccccgccaagaacacagaagaggagcagtacaaggttacaaaggcagagcttgcagaaacagagtacgtgtttgacgtggacaagaagcgttgcgttaa
| 0 | 7 | 0.1 | 0 | 313 |
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|
60 | 11,367 | 316 |
OL943984.1
|
Culex pipiens sensu lato
|
Sindbis virus
|
Sindbis virus
|
Togaviridae
|
Alphavirus
|
ssRNA(+)
|
OL943984.1 |Sindbis virus isolate KYA14MP133/SA, complete genome||Sindbis virus||2022-12-07T00:00:00Z|University of Pretoria, Medical Virology|South Africa|Meno,K.|KYA14MP133/SA|Sindbis virus|Alphavirus|complete|Togaviridae|ssRNA(+)|11367|GenBank||||South Africa: Kyalami|South Africa||Culex pipiens sensu lato||2014||
|
agacagcggccgtccgatcatggataactccggacgggttgtcgcgatagtcctcggtggagctgatgaaggcacacgaactgccctctcggttgtcacctggaatagtaaagggaagacaataaagacaaccccggaagggacagaagagtggtccgcagcaccactggtcgcagccatgtgtttgctcggaaatgtgagcttcccatgcgaccgcccgcccacatgctatacccgcgaaccttccagagccctcgacatccttgaagaaaacgtgaaccacgaggcctacgataccctgctcaatgccatactgcggtgcggatcgtctggcagaagcaaaagaagcgtcactgacgactttaccctgaccagcccgtatttgggtacatgctcgtactgccaccacactgaaccgtgctttagccctgttaagatcgagcaggtctgggacgaagcggacgataacaccatacgcatacagacttccgcccagtttggatacgaccagagcggagcagcaagcgcaaataagtaccgctacatgtcgctcgagcaggatcataccgttaaagaaggcaccatggatgacatcaagattagcacctcaggaccatgtagaaggcttagctacaaaggatactttctcctcgccaaatgccctccaggggacagcgtaacggttagaatagctagtagcaactcagcaacgtcatgtacactggctcgcaagataaaaccaaaattcgtgggacgggaaaaatatgatctacctcccgctcacggtaaaaagattccttgtacagtgtacgaccgtctgaaagaaacaactgcaggctacatcactatgcacaggccgggaccgcacgcctatacgtcctacctggaagaatcatcggggaaagtttacgcaaagccgccatctgggaagaacattacgtacgagtgcaagtgtggcgactacaagaccggaaccgtttcgacccgcaccgaaatcactggttgcaccgccatcaagcagtgtgtcgcctacaagagcgaccaaacgaagtgggtcttcaactcaccggacctgatcagacatgatgaccacacggcgcaagggaaattgcacttgcctttcaagttaatcccgagcacctgcatggtccctgttgcccacgcgccgaatgtgatacatggttttaaacacatcagcctccaattagatacagatcacttgacattgctcaccaccaggaaactaggggcaaacccggaaccaaccactgaatggatcgtcgggaagacagtcagaaacttcaccgtcgaccgtgacggtctggagtacatatggggaaaccatgagccagtgagggtctatgcccaagagtcagcaccaggagaccctcacggctggccacacgaaatagtacagcattactaccaccgccatcctgtgtacaccattctagccgtcgcatctgctaccgtggcgatgttgattggagtaactgttgcagtgctatgtgcctgtaaagcgcgccgtgagtgcctgacgccatacgccctggccccaaacgccgtagtcccaacttcgctggcactcctgtgctgcgttaggtcggccaatgctgaaacgttcaccgagaccatgagctacttgtggtcgaacagtcagccgttcttctgggtccagttgtgcatacctctggccgctttcatcgttctgatgcgctgctgctcctgctgcctgccttttttagtggttgccggcgcctacctggcgaaggtagacgcctacgagcatgcgaccactgttccaaatgtgccacagataccgtataaggcacttgttgaaagggcagggtatgccccgctcaatttggagatcactgtcatgtcctcggaggttttgccttccacctaccaagagtacattacctgcaaattcaccactgtggtcccctccccaaaaatcaaatgctgcggctccttggaatgtcagccagccgctcatgcagactatacctgtaaggtctttggaggggtctatccctttatgtggg
| 5 | 7 | 0.9 | 0 | 316 |
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|
64 | 7,385 | 321 |
MH118039.1
|
Homo sapiens
|
Coxsackievirus A10
|
Enterovirus A
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
MH118039.1 |Coxsackievirus A10 strain 17-118-2, complete genome|set:MH118039|Coxsackievirus A10||2019-04-01T00:00:00Z|National Institute of Virology, Maximum Containment Laboratory|India|Yadav,P.D.||Enterovirus A|Enterovirus|complete|Picornaviridae|ssRNA(+)|7385|GenBank||||India: Bhagalpur district, Bihar State|India||Homo sapiens||2017||
|
caatagctccactcaactcggaatttggagggttgcgacaagctgtcagccagggcatcccagctgagctcaggcccggaaccaatcagttcctgaccacggaagatgataccgcagcacccatcttaccggggttcacccccacccccacaatccacatcccaggggaagtacactccttgttggagctgtgcagggtggagactattttggaggtaaacaacactacggatgccacagggttaacaaggcttttgataccagtgtcctcacagaacaaagctgatgaattgtgtgctgcattcatggtggatccgggccgaatcggaccttggcagtccactttagtcgggcagatctgtcgatactacacacagtggtctggctctctaaaagtgaccttcatgttcactggctctttcatggcaacaggcaagatgctagtagcttactctccacctggaagcgctcaaccggctaacagagaaactgccatgctgggcacacatgtcatctgggatttcggactacaatcatcagtttccctggtgataccatggatcagcaacacccatttccgtactgccaagacaggtgggaactacgattactacacagcaggggtggtgactttatggtatcaaactaactacgtggtcccacctgagacacctggggaggcatacatcattgcaatgggggcagcacaggacaatttcactttaaaaatatgtaaagatactgatgaggtaactcaacaagctgtcttacaaggagaccctgtggaagacataatccacgatgctttagggagcaccgtgcgcagggctattaacagcgctacgagtgtcgaatctgcagccaacaccgtcccaagctcacatcgattggagacaggtcgtgtaccggcactacaggccgcagaaacgggtgccacatccaatgctacagatgagaacatgatcgagacacgctgtgtggtcaatagaaatggagtgttggaaaccaccattaaccacttcttctcccgatccgggttagtgggagtagttaacctcactgacggaggtactgataccacagagtatgccacttgggatatagacatcatgggttttgtgcagcttcgcaggaagtgtgagatgttcacgtacatgaggttcaacgctgaattcacctttgtcacaaccactgcgaatggtgaagcccgcccgtacatgttgcagtacatgtatgtgccccctggtgctcctaaacccactggtagggacgcattccaatggcaaacagcaaccaatccctcagtctttgttaagctcactgaccctccagcacaagtctcagtcccttttatgtccccagctagtgcataccagtggttctatgatggataccctacattcggtcaacacccggaaacatctaacacgacgtacgggttgtgtcctaacaatatgatgggtacctttgcagtacgagttgttagcagagtagcaagccagctcaaattgcaaactagggtatatatgaagctcaagcatgtgagagcatgggttcctaggccgattaggtctcaaccttatctacttaagaatttccccaactacgacagtggcaagatcaccaacagtgcgcgagaccgatccagtatcaaacaagccaatatgggaaagttcggtcagcaatctggagctgtatatgtaggaaacttcagagtggtgaaccgtcaccttgctacgcacaatgactggaacaatctagtatgggaggacagctcaagagatcttcttgtgtcatccacgacagctcaagggtgtgataccattgcccgctgtaactgccaaactggagtatattactgcaactctcggagaaaacactaccctgttagcttttcaaagcccagtcttatttttgtggaggccagtgaatattatcctgctaggtatcagtcccatctcatgcttgctgaaggccactctgagccaggagattgtggaggtattctcaggtgtcagcacggtgtcatcggcatagtgtccactggt
| 1 | 5 | 0.4 | 0 | 321 |
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] |
|
64 | 7,385 | 322 |
MH118039.1
|
Homo sapiens
|
Coxsackievirus A10
|
Enterovirus A
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
MH118039.1 |Coxsackievirus A10 strain 17-118-2, complete genome|set:MH118039|Coxsackievirus A10||2019-04-01T00:00:00Z|National Institute of Virology, Maximum Containment Laboratory|India|Yadav,P.D.||Enterovirus A|Enterovirus|complete|Picornaviridae|ssRNA(+)|7385|GenBank||||India: Bhagalpur district, Bihar State|India||Homo sapiens||2017||
|
tatcaaacaagccaatatgggaaagttcggtcagcaatctggagctgtatatgtaggaaacttcagagtggtgaaccgtcaccttgctacgcacaatgactggaacaatctagtatgggaggacagctcaagagatcttcttgtgtcatccacgacagctcaagggtgtgataccattgcccgctgtaactgccaaactggagtatattactgcaactctcggagaaaacactaccctgttagcttttcaaagcccagtcttatttttgtggaggccagtgaatattatcctgctaggtatcagtcccatctcatgcttgctgaaggccactctgagccaggagattgtggaggtattctcaggtgtcagcacggtgtcatcggcatagtgtccactggtgggaatgggcttgttggtttcgcagacattagggacctcttgtggttagatgaagaagctatggaacaaggtgtgtcagactacattaaagggcttggtgatgcatttgggacaggtttcaccgatgcggtctctagagaggtagaggcccttaagaaccacctcatagggtccgagggagctgttgaaaggattttgaagaacctgatcaaactaatttcagcactagtgatagtgataagaagtgattatgacatggtaaccctcacagcaactttggctctaattggatgccatggtagtccctgggcttggatcaaagctaaaacagcatccattctaggcattcccattgctcagaagcagagtgcatcctggctcaagaagttcaatgacatggcaagtgctgctaagggattggagtggatatctaacaagatcagtaaattcattgattggctcaaagagaagatcataccagcggccaaagagaaggtagaattcctaaacaatttgaaacagttgccattgttggagaaccaaatttcaaatttagagcagtctgcagcctcacaggaagacctcgaagctatgtttggaaatgtgtcgtatctcgcacatttctgtcgcaaattccaaccactctacgctacagaggcaaaaagggtctatgcattggaaaagaggataaataattacatgcagttcaagagcaaacaccgtattgaacctgtatgtctcatcatcagaggctccccaggtactggcaaatccctggcgactggcatcatcgcccgtgcaatagctgacaagtaccattctagtgtatattccctgccaccagacccagaccattttgatggttacaagcaacaagtggttacagttatggatgacttatgccaaaaccccgatggaaaggacatgtcactattctgccagatggtatctactgtggatttcatcccaccaatggcttccttagaggagaaaggagtatctttcacatctaaatttgtcattgcatctactaatgccagcaacatcattgtgccaacagtatctgattcagacgccattcgccgtagattctatatggactgtgatattgaggtgactgactcgtacaaaacggacctgggcaggctggacgccgggcgtgctgctaagttatgctctgagaacaacacggctaacttcaagcgttgcagccccctagtgtgtggcaaggcaatacagctaagagacaggaagtctaaggtgaggtacagtgtggatactgtggtctctgaactcattagagagtacaataatagatcagccattggtaacactattgaagccttgttccagggaccacccaagttcagacccatcagaattagccttgaggaaaagccagctccagacgccatcagcgaccttctggccagtgtagatagtgaagaagtgcgccagtattgtagagaccaaggctggatcattccggaaactcccactaacgttgagcggcatctcaatagggcagtcctagccgtgcaatctatcgctacagttgtggcagttgtctcactggtgtatgtcatctacaagctctttgctggattccaaggtgcgtactcaggcgcgcccaagcagacactcaaga
| 2 | 5 | 0.6 | 0 | 322 |
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] |
|
65 | 2,341 | 324 |
KX867855.1
|
Aves
|
Influenza A virus (A/wild bird/Jiangxi/P419/2016(H6N8))
|
Alphainfluenzavirus influenzae
|
Orthomyxoviridae
|
Alphainfluenzavirus
|
ssRNA(-)
|
KX867855.1 |Influenza A virus (A/wild bird/Jiangxi/P419/2016(H6N8)) segment 2 polymerase PB1 (PB1) gene, complete cds|set:bc63cf7194d439a4e80ee6e62ef611df9966835b|Influenza A virus (A/wild bird/Jiangxi/P419/2016(H6N8))||2016-11-14T00:00:00Z|Laboratory of avian disease surveillance, China Animal Health and Epidemiology Center|China|Jiang,W., Hou,G., Li,J., Peng,C., Chen,J.||Alphainfluenzavirus influenzae|Alphainfluenzavirus|complete|Orthomyxoviridae|ssRNA(-)|2341|GenBank|H6N8|2||China|China||Aves||2016-01-07||
|
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|
67 | 1,015 | 325 |
ON959857.1
|
Musa hybrid cultivar
|
Banana bunchy top virus
|
Banana bunchy top virus
|
plant leaf
|
Nanoviridae
|
Babuvirus
|
ssDNA(+)
|
ON959857.1 |Banana bunchy top virus isolate ALYU-32 segment DNA-C, complete sequence||Banana bunchy top virus||2023-11-01T00:00:00Z|INRAE, UMR PHIM (Plant Health Institute of Montpellier)|France|Guyot,V., Ly,N.-S., Trieu,T.-D., Insisiengmay,O., Zhang,T., Iskra-Caruana,M.-L., Pooggin,M.M., Trieu,T.D., Iskra-Caruana,M.L.|ALYU-32|Banana bunchy top virus|Babuvirus|complete|Nanoviridae|ssDNA(+)|1015|GenBank||DNA-C|1|Viet Nam|Viet Nam||Musa hybrid cultivar|plant leaf|2018||
|
tattaccccccctgctcgggacgggacatcacgtgcatcaaacaaatgcacgtgacaaagcagtagcttgtagcgaaagataaccatcactatcacaaaagtgagaggaatattcgttgcttagggactaagcaacgtgctcagataattgttcgagaagcgacaatggaggctatttaaacctgatggttttgtgatttccgaaatcactcatcggtgcagaaatggagttctgggaatcgtctgccatgccagacgatgtaaagagagtgatcaaggaaatatattgggagcatcgaaacaaacttctgttctgtcagaagttgaaaggctgtgtaagaaggattctggagcatggaaatcaagatgatgctctagacgcagtgaaggagatgaagacttctattattcgctatagcgaatatttgaagaaaccatgtgtggtattgtgttttagttctaataaatctattgcatataggttaaacacaatggtgttcttttatcatgaatatattgaggatctaggaggagactactcggtatatcaagatctgttctgtgatgaggaacttccttattcgtcgacagaagaagaagatgaagaagtaatatacaggaatgttatcatggcatcgacagaagagaagatctcttggagtgaatgtcaaaagatagttatatcagattatgatgtaacattactgtaatgaatatccattatcataaataaaataatggaatgatgattatgtattctagtataaatacataatggtatacgtatagcataaaatacatatatctacatacaacacgctatgacaaacagggaaaaatgaagaatcgggggttgattgggctatcttaacgattaagggccgaaggcccgtttaaatatgtggtggacgaagtccacaacacataaaaagtgagcagaacaatggaatataatgagctggcaacgtagggtccatgtcccgagttagtgcgccacgtgagcaggggggactat
| 0 | 1 | 1 | 0 | 325 |
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68 | 2,274 | 326 |
KJ413910.1
|
Sus scrofa
|
Influenza A virus (A/swine/Ontario/11-105317/2011(H3N2))
|
Alphainfluenzavirus influenzae
|
oronasopharynx
|
Orthomyxoviridae
|
Alphainfluenzavirus
|
ssRNA(-)
|
KJ413910.1 |Influenza A virus (A/swine/Ontario/11-105317/2011(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds|set:6fb557293fa845bf01da9b43d3735c59bb3b88a5|Influenza A virus (A/swine/Ontario/11-105317/2011(H3N2))||2014-12-04T00:00:00Z|University of Guelph, Ontario Veterinary College, Population Medicine|Canada|Grgi,H., Costa,M., Friendship,R.M., Carman,S., Nagy,E., Wideman,G., Weese,S., Poljak,Z., Grgic,H., Friendship,R.|11-105317|Alphainfluenzavirus influenzae|Alphainfluenzavirus|complete|Orthomyxoviridae|ssRNA(-)|2274|GenBank|H3N2|2|1|Canada|Canada||Sus scrofa|oronasopharynx|2011-11-23||
|
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] |
69 | 3,116 | 327 |
EU522066.1
|
Homo sapiens
|
Hepatitis B virus
|
Hepatitis B virus
|
animal tissues
|
Hepadnaviridae
|
Orthohepadnavirus
|
dsDNA-RT
|
EU522066.1 |Hepatitis B virus isolate patient 4N, complete genome|set:EU522066|Hepatitis B virus||2010-02-28T00:00:00Z|National Health Research Institutes, Division of Molecular and Genomic Medicine||Huang,S.-F., Yeh,C.-T., Chen,Y.-T., Ku,Y.-C., Chiu,Y.-T., Hsu,H.-Y., Hsieh,W.-Y.|patient 4N|Hepatitis B virus|Orthohepadnavirus|complete|Hepadnaviridae|dsDNA-RT|3116|GenBank||||Taiwan|Taiwan||Homo sapiens|animal tissues|2000-10-25||
|
agggccctgtactttcctgctggtggctccagttcaggaacagtgagccctgctcagaatactgtctctgccatatcgtcaatcttatcgaagactggggaccctgtaccgaacatggagaacatctcatcaggactcctaggacccctgctcgtgttacaggcggggtttttcttgttgacaaaaatcctcacaataccacagagtctagactcgtggtggacttctctcagttttctagggggaacacccgtgtgtcttggccaaaattcgcagtcccaaatctccagtcactcaccaacctgttgtcctccaatttgtcctggttatcgctggatgtgtctgcggcgttttatcatcttcctctgcatcctgctgctatgcctcatcttcttgttggttcttctggactatcaaggtatgttgcccgtttgtcctctaattccaggatcatcaacaaccagcaccggaccatgcaaaacctgcacgactcctgctcaaggaacctctatgtttccctcatgttgctgtacaaaacctacggacggaaactgcacctgtattcccatcccatcatcttgggctttcgcaaaatacctatgggagtgggcctcagtccgtttctcttggctcagtttactagtgccatttgttcagtggttcgtagggctttcccccactgtctggctttcagttacatggatgatgtggtattgggggccaagtctatacaacatcttgagtccatttataccgctgttaccaattttcttttgtctttgggtatacatttaaaccctcacaaaacaaaaagatggggatattcccttaacttcatgggatatgtaattggaagttggggcacattgccacaggaacatattgtacaaaaaatcaaaatgtgttttaggaaacttcctgttaataggcctattgattggaaagtatgtcaacgaattgtgggtcttttgggatttgccgcccctttcacacaatgtggatatcctgctttaatgcctttatatgcatgtatacaagcaaaacaggcttttactttctcgccaacttacaaggcctttctaagtaaacagtatctgaacctttaccccgttgctcggcaacggtctggtctgtgccaagtgtttgctgacgcaacccccactggttggggcttggccataggccatcagcgcatgcgtggaacctttgtgtctcctctgccgatccatactgcggaactcctagccgcttgttttgctcgcagcaggtctggggcaaaactcatcgggactgacaattctgtcgtgctctcccgcaagtatacatccttcccatggctgctaggctgtgctgccaactggatcctgcgcgggacgtcctttgtttacgtcccgtcggcgctgaatcccgcggacgacccctcccggggccgcttggggctctaccgcccgcttctccgcctcttgtaccgaccgaccacggggcgcacctctctttacgcggactccccgtctgtgccttctcatctgccggtccgtgtgcacttcgcttcacctctgcacgtcgcatggaaaccaccgtgaacgcccaccggaacctgcccaaggtcttgcataagaggactcttggactttcagcaatgtcaacgaccgaccttgaggcatacttcaaagactgtgtgtttactgagtgggaggaattgggggaggagattaggttaatgatctttgtattaggaggctgtaggcataaattggtgtgttcaccagcaccatgcaactttttcacctctgcctaatcatctcttgttcatgtcctactgttcaagcctccaagctgtgccttgggtggctttagggcatggacatcgacacctataaagaatttggagcttctgtggagttactctcttttttgccttctgacttttttccttctattcgagatctcctcgacaccgcctctgctctgtatcgggaggccttagagtctccggaacattgttcacctcaccatacggcactcaggcaagctattgtgtgttgggg
| 0 | 2 | 0.5 | 0 | 327 |
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] |
70 | 1,767 | 329 |
AY484407.1
|
Porcine circovirus 2
|
Circovirus porcine2
|
Circoviridae
|
Circovirus
|
ssDNA(+/-)
|
AY484407.1 |Porcine circovirus 2 isolate NL_Control_1, complete genome|set:AY484407|Porcine circovirus 2||2004-12-01T00:00:00Z|Veterinary Laboratories Agency, Department of Virology|United Kingdom|Grierson,S.S., King,D.P., Wellenberg,G.J., Banks,M.|NL_Control_1|Circovirus porcine2|Circovirus|complete|Circoviridae|ssDNA(+/-)|1767|GenBank|||1|Netherlands|Netherlands||||||
|
accagcgcacttcggcagcggcagcacctcggcagcacctcagcagcaacatgcccagcaagaagaatggaagaagcggaccccaaccacataaaaggtgggtgttcacgctgaataatccttccgaagacgagcgcaagaaaatacgggagcttccaatctccctgtttgattattttattgttggcgaggagggtaatgaggaaggacgaacacctcacctccaggggttcgctaattttgtgaaaaagcaaacttttaataaagtgaagtggtatcttggtgcccgctgccacatcgagaaagccaaaggaactgatcagcagaataaagaatattgcagtaaagaaggcaacttacttattgagtgtggagctcctagatctcaaggacaacggagtgacctgtctactgctgtgagtaccttgttggagagcgggagtctggtgaccgttgcagagcagcaccctgtaacgtttgtcagaaatttccgcgggctggctgaacttttgaaagtgagcgggaaaatgcagaagcgtgattggaagaccaatgtacacgtcattgtggggccacctgggtgtggtaaaagcaaatgggctgctaattttgcagacccggaaaccacatactggaaaccacctagaaacaagtggtgggatggttaccatggtgaagaagtggttgttattgatgacttttatggctggttgccctgggatgatctactgagactgtgtgatcgatatccattgactgtagagactaaaggtggaactgtaccttttttggcccgcagtattctgattaccagcaatcagaccccgttggaatggtactcctcaactgctgtcccagctgtagaagctctttatcggaggattacttccttggtattttggaagaatgctacagaacaatccacggaggaagggggccagttcgtcaccctttcccccccatgccctgaatttccatatgaaataaattactgagtcttttttatcacttcgtaatggtttttattattcattaagggttaagtggggggtctttaagattaaattctctgaattgtacatacatggttacacggatattgtattcctggtcgtatatactgttttcgaacgcagtgccgaggcctacgtggtctacatttccagcagtttgtagtctcagccacagctgatttcttttgttgtttggttggaagtaatcaatagtggaatctaggacaggtttgggggtaaagtagcgggagtggtaggagaagggctgggttatggtatggcgggaggagtagtttacataggggtcataggtgagggctgtggcctttgttacaaagttatcatctagaataacagcactggagcccactcccctgtcaccctgggtgatcggggagcagggccagaattcaaccttaacctttcttattctgtagtattcaaagggcacagagcgggggtttgagccccctcctgggggaagaaagtcattaatattgaatctcatcatgtccaccgcccaggagggcgttttgactgtggttcgcttgatagtatatccgaaggtgcgggagaggcgggtgttgaagatgccatttttccttctccagcggtaacggtggcgggggtggacgagccaggggcggcggcggaggatctggccaagatggctgcgggggcggtgtcttcttctccggtaacgcctccttggatacgtcatatctgaaaacgaaagaagtgcgctgtaagtatt
| 0 | 2 | 0.5 | 0 | 329 |
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||
71 | 5,229 | 330 |
EF444550.1
|
WU Polyomavirus
|
Betapolyomavirus quartihominis
|
Polyomaviridae
|
Betapolyomavirus
|
dsDNA
|
EF444550.1 |WU Polyomavirus strain S1, complete genome|set:EF444550|WU Polyomavirus||2007-05-07T00:00:00Z|Washington University School of Medicine, Molecular Microbiology and Pathology & Immunology|USA|Gaynor,A.M., Nissen,M.D., Whiley,D.M., Mackay,I.M., Lambert,S.B., Wu,G., Brennan,D.C., Storch,G.A., Sloots,T.P., Wang,D., Sloots,T.D.||Betapolyomavirus quartihominis|Betapolyomavirus|complete|Polyomaviridae|dsDNA|5229|GenBank|||1|USA|USA||||||
|
gcctcaggcctccttattataataaaaaaaagctaagcatgattgacagtgtgggctaaaccaaaagcacaagaacaaagcttttagccaattagcagccacaaggtggagcaaaagtattaagtttcactgttatgtgcaggaatgtgcagctgtgaccttttaaagtttccgggcacggcgccaacttcctgggcctggtgccataccaacacagctgctgagcttccggaatacaatactggtgccctttgtaagtgttttacaggtaagtaaggcctacaacagggcttatttgtactataagttaatgggggccctttgtagtccagcggaaagtgaagggtggcttaacagagacgtccttgggttcaaacctaagggtgccataagcaacattacattaatgttgtgacatctccagtcgggggtattggcctataggaaaccctagggctctataagcagcatacatatgttgtgacatctccgttgagtctgggggtattggtgctaccgtctcgaacctagccgacagccgttggatataaagggtcaccatttttatttcagatgggcatattgcttgctgtgcctgaaataattgctgcatctgtagctggaggagcagaggcactatcaattgctggatctggagctgcaatagcaactggtgaaggtttagctgctcttggtgggcttacagagtcagcagcactattaggggaaactgttgaaatatctgaagcagctgctactgtactaacaaaagtacctgagcttgtaactgtaacacaaggtgtaacagcagctgtacaagggggtgcaggtcttgtaggtggtatatatacagctttagcagcagatcgccctggggacctgcctgcgagtaccccaacaggaagtccaagtggactacatccccccgcaggatacaatccccaaggaggtggacttaatatccagtccatccacaagcccctccacgccccctacccaggaatggcactggcacctatccctgaatacaacttggaaactggaattccaggggtcccggactgggtattcaacttcattgcatcccacctgcccgagttgcctagcctgcaggacgtgttcaatagaattgcctatggaatctggacatcatattacaatacggggagaacagtagttaatagagcagttagtgaagaattacaaagactactaggagatttagaatatggatttagaactgcacttgccaccattggggaatctgacccagtaaatgctatagttgaacaagtaagaagctttgttagtggaggaagacaaagagaactgttacaaatagctgcaggtcaacctgtagacatttctgaaggtgtatcaagaggcacagctactatttcaaatgctgtagaagctgtaagagatgcaactcaaagactatcacaagcaacctacaactttgtttatgatgcttctacccttccaagggatggctttaatgcacttagtgatggagttcacaggctaggccagtggatttcaatgcctggggctacagggggtactccccattatgcagcccctgactggattttatatgtacttgaagagctaaacagtgacatttctaaaattcctacacagggaattaaaagaaaactacaacaaaatggcctgcacagcaaagccagcctgcacagcaaaaccaggaaggtcaccaagaagtcaacccacaagagtgcaaagccttccaaaacaagtcagaaaaggaggggtagacgtgctggccgccgtaccactgtcagaagaaacagagtttaaagttgaattgtttgttaaacctgttattggaaatgcagaggggactaccccacattattggtctattagtagcccacttaaaactgctgaagctgctaatgttactcctgatgctgatactactgtgtgctacagcttgtcacaggttgctccccctgatattcctaatcaggttagtgaatgtgacatgcttatatgggagctgtatagaatggaaacagaagttt
| 0 | 4 | 0.2 | 0 | 330 |
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] |
||
71 | 5,229 | 331 |
EF444550.1
|
WU Polyomavirus
|
Betapolyomavirus quartihominis
|
Polyomaviridae
|
Betapolyomavirus
|
dsDNA
|
EF444550.1 |WU Polyomavirus strain S1, complete genome|set:EF444550|WU Polyomavirus||2007-05-07T00:00:00Z|Washington University School of Medicine, Molecular Microbiology and Pathology & Immunology|USA|Gaynor,A.M., Nissen,M.D., Whiley,D.M., Mackay,I.M., Lambert,S.B., Wu,G., Brennan,D.C., Storch,G.A., Sloots,T.P., Wang,D., Sloots,T.D.||Betapolyomavirus quartihominis|Betapolyomavirus|complete|Polyomaviridae|dsDNA|5229|GenBank|||1|USA|USA||||||
|
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| 1 | 4 | 0.5 | 0 | 331 |
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||
71 | 5,229 | 332 |
EF444550.1
|
WU Polyomavirus
|
Betapolyomavirus quartihominis
|
Polyomaviridae
|
Betapolyomavirus
|
dsDNA
|
EF444550.1 |WU Polyomavirus strain S1, complete genome|set:EF444550|WU Polyomavirus||2007-05-07T00:00:00Z|Washington University School of Medicine, Molecular Microbiology and Pathology & Immunology|USA|Gaynor,A.M., Nissen,M.D., Whiley,D.M., Mackay,I.M., Lambert,S.B., Wu,G., Brennan,D.C., Storch,G.A., Sloots,T.P., Wang,D., Sloots,T.D.||Betapolyomavirus quartihominis|Betapolyomavirus|complete|Polyomaviridae|dsDNA|5229|GenBank|||1|USA|USA||||||
|
ctactgtaaattgatctattgcaactcctaactcaaagtttaatctatcagctggaatattaatatttaaggcctttcctccacaaaggtcaagtaaagcagcagcaacagttgttttaccactgtttataggccccttaaaaacccaatacctttttttaggtacattttcaactataacttttaggtacctgtatacaagctcatctattttaccatttaggcctaaataccaggctacaccagccatatataataaaacatcttgctcacctttaatagttttatccattttgtctagtattttttcaaatcttctagctaataaatcttctctggacatatttaaactatctacccttctttttgcaataaccacatcaatagcctgttgacacacatttttttgacttttactgtctgaaaatagtaaagcatttttttgatgttccatatgaagtctattatgagttgcatcttcattactattgcatttttcacactcttctaccttaatagatagttgtaaatataatccaagtaataagtacacatcatcaattcctaattctaaagcaaattctgacaaagccttccaatttaattgatctttaaactccccatataaatcctcagctttaaaatcattttcttttaagccaccaggaatattttcttcacataaagtaaatggatctctagtcattctactatataaaccatatgcattattaacacctttacaaaataaaaagctaatagtacagtatcccttacaaaagttattaacagcactaactctatgtctaaaaggtgttaaaataaacacaagtgcagtattataataagaatgtctacttgcaaaattacatttaaacttacttaaaagttttttatatagggtttctgccttttctttggtggtatgtattacaaatgcagttaaagttctattactaaatacagcttgagacacaaattcttccaattctttaggaaatgataaagatgcatctgtagcattgtcctttttttttttaggtggtgttgcctgtgaacattgtggttcctcatcatcttctctagtacgctttgtaggggtttctccaggagatttaggcatttcctcattacatcttagttcttcttcccagtaggaattaaactgagaccaccagtaatcccagtctggggtaccatatgtgggtatctataataaaaaaaagttattaatttacttataaaacataaaagtacccctataataaaaacatgcttacctggttaagccaaccccttgcatggttgtaagaaatataatctttttccagtaaaaaaatgtttctgcactaatttcaaagccaaaccactctctatagcacctgtagcagtaacactctatccacattggaggttttctaaatattttatatttttgcttgtggcgcttgtctaaaaagcagtaaaaacaattacacaaataataaaacccctttaagcatatgtcccagtcttttaaaatatactcttcaaaaacatcaccataaacttctccaacaagcctgtactttctagggggaaagttacagcacaattctgtgcattctacctgtgaagagctccacacttcatcttcttcttcatttagttggtgcactgtactaacacactcttgcagttttaaatataaagaattaagctttttcattttttcctcatttccccctttgtcaggatgaaattctttgcatttgctaaggtattttgttctcattagtggtaaatttccccagcaggtcatatcaagacccagcagctgcataagttcttttgcttcatttctggacaaagttttatccattttgccttctttagcctcaaggcgcctcagcaaggccctctgcttttagttcaaaaaggtgaggctttttag
| 2 | 4 | 0.8 | 0 | 332 |
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||
73 | 10,649 | 335 |
EU482572.1
|
Homo sapiens
|
Dengue virus type 2
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU482572.1 |Dengue virus 2 isolate DENV-2/US/BID-V1168/1987, complete genome|set:EU482572|Dengue virus type 2||2008-03-04T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., McElroy,K.L., Santiago,G., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Crawford,M., Engels,R., Freedman,E., Howarth,C., Jen,D., Larson,L., Ledlie,T., Lewis,B., Montgomery,P., Park,D., Pearson,M., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., MacCallum,I., Lander,E., Galagan,J., Nusbaum,C., Munoz-Jordan,J., Birren,B.|DENV-2/US/BID-V1168/1987|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10649|GenBank||||USA: Puerto Rico|USA|PR|Homo sapiens||1987||PRJNA31235
|
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|
73 | 10,649 | 336 |
EU482572.1
|
Homo sapiens
|
Dengue virus type 2
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU482572.1 |Dengue virus 2 isolate DENV-2/US/BID-V1168/1987, complete genome|set:EU482572|Dengue virus type 2||2008-03-04T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., McElroy,K.L., Santiago,G., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Crawford,M., Engels,R., Freedman,E., Howarth,C., Jen,D., Larson,L., Ledlie,T., Lewis,B., Montgomery,P., Park,D., Pearson,M., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., MacCallum,I., Lander,E., Galagan,J., Nusbaum,C., Munoz-Jordan,J., Birren,B.|DENV-2/US/BID-V1168/1987|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10649|GenBank||||USA: Puerto Rico|USA|PR|Homo sapiens||1987||PRJNA31235
|
gaagaaacaggatgtcgttgttttaggatctcaagaaggggccatgcacacggcactcacaggggccacagaaatccagatgtcatcaggaaacttactgttcacaggacatctcaagtgcaggctgagaatggacaaactacagctcaaaggaatgtcatactctatgtgtacaggaaagtttaaaattgtgaaggaaatagcagaaacacaacatggaacaatagttatcagagtacaatatgaaggggacggctctccatgtaagatcccttttgagataatggatttggaaaaaagacacgtcttaggtcgcctgattacagttaacccaatcgtaacagaaaaagatagcccagtcaacatagaagcagaacctccattcggagacagctacatcatcataggagtagagccgggacaattgaaactcaattggtttaagaagggaagttccatcggccaaatgtttgagacaacaatgagaggagcgaagagaatggccatcttaggtgacacagcctgggattttggatccctgggaggagtgtttacatctataggaaaggctctccaccaagttttcggagcaatctatggggctgcttttagtggggtctcatggactatgaaaatcctcataggagtcatcatcacatggataggaatgaattcacgtagcacctcactgtctgtgtcactagtattggtgggagtcgtgacactgtacctgggagctatggtacaggctgatagtggttgcgttgtgagctggaaaaataaagaactgaaatgtggcagcgggatcttcatcacagataacgtgcacacatggacagaacaatataagttccaaccagaatccccttcaaaactagcttcagctatccaaaaagctcatgaagagggcatttgtggaatccgctcagtaacaagattggagaatctgatgtggaaacaagtaacaccagaattgaatcacattctatcagaaaatgaggtaaagttgaccattatgacaggagacattaaaggaatcatgcaggcaggaaaacgatctttgcggccccagcccactgagctgaagtactcatggaaaacatggggaaaggcgaaaatgctctccacagagtctcacaatcagacctttcttattgatggccctgaaacagcagaatgccccaacacaaacagagcttggaactcgctggaagttgaagactatggttttggagtttttaccaccaatatatggctaaaattgagagaaaaacaggatgtattttgtgactcaaaactcatgtcagctgccataaaagacaacagagccgtccatgccgatatgggttattggatagaaagtgcactcaatgacacatggaagatggagaaagcctctttcattgaagttaaaagctgccactggccaaagtcacacaccctctggagcaatggagtattagaaagtgagatgataattccaaaaaattttgctgggccagtgtcacaacacaactacagaccaggctaccatacacaaacagcaggaccttggcatctaggtaagcttgagatggactttgatttctgcgaaggaactacagtggtggtgactggggactgtggaaatagaggaccctctttaagaacgaccaccgcctctggaaaactcataacagaatggtgctgtcgatcctgcacactaccacctctaagatacagaggtgaggatggatgctggtacgggatggaaatcagaccattgaaagagaaagaggagaatttggtcaactccttggtcacagccggacatgggcagattgacaacttttcactaggagtcttgggaatggcactgttcctggaagaaatgctcaggacccgagtaggaacgaaacatgcaatactgctagttgcagtatcttttgtgacattgattactgggaacatgtcctttagagacctgggaagagtgatggttatggtgggcgctaccatgacggatgacataggtatgggagtgacctatcttgccctactagcagctt
| 1 | 7 | 0.3 | 0 | 336 |
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|
73 | 10,649 | 337 |
EU482572.1
|
Homo sapiens
|
Dengue virus type 2
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU482572.1 |Dengue virus 2 isolate DENV-2/US/BID-V1168/1987, complete genome|set:EU482572|Dengue virus type 2||2008-03-04T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., McElroy,K.L., Santiago,G., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Crawford,M., Engels,R., Freedman,E., Howarth,C., Jen,D., Larson,L., Ledlie,T., Lewis,B., Montgomery,P., Park,D., Pearson,M., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., MacCallum,I., Lander,E., Galagan,J., Nusbaum,C., Munoz-Jordan,J., Birren,B.|DENV-2/US/BID-V1168/1987|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10649|GenBank||||USA: Puerto Rico|USA|PR|Homo sapiens||1987||PRJNA31235
|
acgaccaccgcctctggaaaactcataacagaatggtgctgtcgatcctgcacactaccacctctaagatacagaggtgaggatggatgctggtacgggatggaaatcagaccattgaaagagaaagaggagaatttggtcaactccttggtcacagccggacatgggcagattgacaacttttcactaggagtcttgggaatggcactgttcctggaagaaatgctcaggacccgagtaggaacgaaacatgcaatactgctagttgcagtatcttttgtgacattgattactgggaacatgtcctttagagacctgggaagagtgatggttatggtgggcgctaccatgacggatgacataggtatgggagtgacctatcttgccctactagcagctttcaaagttagaccaacttttgcagctggactactcttgagaaaactgacctccaaggaattaatgatggccaccataggaatcgcactcctttcccaaagcaccataccagagaccattcttgaactgactgatgcgttagccttgggcatgatggtcctcaaaatagtgagaaatatggaaaagtaccaattggcagtgactatcatggctatctcgtgtgtcccaaatgcagtgatattgcaaaacgcatggaaggtgagttgcacaatattggcagtggtgtccgtttctccactgcttttaacatcctcacagcagaaagcggattggataccactggcattgacgataaaaggtctcaatccaacagccatttttctaacaactctttcgagaaccagcaagaaaaggagctggccgctaaatgaagctatcatggcagtcgggatggtgagcattttagccagttctctcctaaagaatgacattcccatgacaggtccattagtggctggagggctccttactgtgtgttacgtgctcactggacgatcggccgatttggaactggagagagctgccgatgtaaaatgggaagatcaggcggaaatatcaggaagcagcccaatcctgtcaataacaatatcagaagatggcagcatgtcgataaaaaatgaagaggaagaacaaacactgaccatactcatcagaacgggattgttggtgatctcaggagtctttccagtatcgataccaattacggcagcagcatggtacctttgggaagtgaaaaaacaacgggctggagtattgtgggacgtcccttcacccccaccagtgggaaaagccgaactggaagatggagcctatagaatcaagcaaagagggattcttggatattctcagattggagccggagtttacaaagaaggaacattccatacaatgtggcacgtcacacgtggtgctgttctgatgcatagagggaagaggatcgaaccatcatgggcagacgtcaagaaagacttaatatcatatggaggaggctggaagctagaaggagaatggaaggaaggagaggaagtccaagtcctggcattggaacctggaaaaaatccaagagccgtccaaacaaaacctggacttttcaaaactaacaccggaaccataggcgccgtatctctggacttttcccctggaacgtcaggatctccaattgtcgacagaaaaggaaaagttgtgggtctttacggtaatggtgttgtcacaaggagtggagcatatgtgagtgctatagcccagaccgaaaaaagcattgaagacaatccagagatcgaagatgacattttccgaaagaaaagattgaccatcatggacctccatccaggagcaggaaagacaaaaagataccttccagccatagttagagaagccataaaacgtggcttgagaacattaatcctggctcctactagagtcgtggcagctgaaatggaggaagctcttagaggacttccaataagataccaaaccccagccatcagagccgagcacactgggcgggagatcgtggacctaatgtgtcatgccacatttactatgaggctgctatcaccagtcagagtgccaaattacaacctgatcat
| 2 | 7 | 0.4 | 0 | 337 |
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] |
|
73 | 10,649 | 338 |
EU482572.1
|
Homo sapiens
|
Dengue virus type 2
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU482572.1 |Dengue virus 2 isolate DENV-2/US/BID-V1168/1987, complete genome|set:EU482572|Dengue virus type 2||2008-03-04T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., McElroy,K.L., Santiago,G., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Crawford,M., Engels,R., Freedman,E., Howarth,C., Jen,D., Larson,L., Ledlie,T., Lewis,B., Montgomery,P., Park,D., Pearson,M., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., MacCallum,I., Lander,E., Galagan,J., Nusbaum,C., Munoz-Jordan,J., Birren,B.|DENV-2/US/BID-V1168/1987|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10649|GenBank||||USA: Puerto Rico|USA|PR|Homo sapiens||1987||PRJNA31235
|
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|
74 | 1,744 | 341 |
KU201608.1
|
Anser caerulescens
|
Influenza A virus (A/snow goose/Missouri/15-011246-1/2015(H5N2))
|
Alphainfluenzavirus influenzae
|
swab
|
Orthomyxoviridae
|
Alphainfluenzavirus
|
ssRNA(-)
|
KU201608.1 |Influenza A virus (A/snow goose/Missouri/15-011246-1/2015(H5N2)) segment 4 hemagglutinin (HA) gene, complete cds|set:16adbd0089e3d9cfef4336c90f60e249a3aded6f|Influenza A virus (A/snow goose/Missouri/15-011246-1/2015(H5N2))||2015-12-22T00:00:00Z|USDA APHIS VS, Diagnostic Virology Laboratory, National Veterinary Services Laboratories (NVSL)|USA|Killian,M.L., Stallknecht,D., Poulson,R.||Alphainfluenzavirus influenzae|Alphainfluenzavirus|complete|Orthomyxoviridae|ssRNA(-)|1744|GenBank|H5N2|4||USA: St. Charles County, Missouri|USA|MO|Anser caerulescens|swab|2015-03||
|
ggttcaatctgtcaaaatggagaaaatagtgcttctttttgcagtgattagccttgttaaaagtgatcagatttgcattggttaccatgcaaacaactcaacaaagcaggttgacacgataatggagaaaaacgtcactgttacacatgcccaagacatactggaaaagacacacaacgggaagctctgcgatcttaatggagtgaagcccctgattctaaaggattgtagcgtagctgggtggctccttggaaatccaatgtgcgacgagttcatcagggtaccggaatggtcttacatcgtggagagggctaacccagccaacgacctctgttacccagggaccctcaatgactatgaggaactgaaacacctattgagcagaataaatcattttgagaaaactctgatcatccccaggagttcttggcccaatcatgaaacatcattaggggtgagcgcagcatgtccataccagggagcatcctcatttttcagaaatgtggtatggctcatcaaaaagaacgatgcatacccgacaataaagataagctacaataataccaatcgggaagatcttttgatactgtgggggattcatcattccaacaatgcagcagagcagacaaatctctataaaaacccagacacttatgtttccgttgggacatcaacattaaaccagagattggtgccaaaaatagctactagatcccaagtaaacgggcagagtggaagaatggatttcttctggacaattttaaaaccgaatgatgcaatccactttgagagtaatggaaatttcattgctccagaatatgcatacaaaattgtcaagaaaggggactcaacaattatgaaaagtgaaatggagtatggccactgcaacaccaaatgtcaaactccaataggggcgataaactctagcatgccattccacaatatacaccctctcaccatcggggaatgccccaaatacgtgaagtcaaacaaattagtccttgcgactgggctcagaaatagtcctctaagagaaagaagaagaaaaagaggactatttggagctatagcagggtttatagagggaggatggcagggaatggtagacggttggtatgggtatcatcatagcaatgagcaggggagtgggtacgctgcagacaaagaatcaacccaaaaggcaatagatggagttaccaataaggtcaactcaatcattgacaaaatgaacactcaatttgaggccgttggaagggaatttaataacttagaaaggagaatagagaatttaaacaagaaaatggaagacggattcctagatgtctggacttataatgctgaacttttagttctcatggaaaatgagagaactctagatttccatgactcaaatgtcaagaacctttacgacaaagtccgactacagcttagggataatgcaaaggagctgggtaatggttgtttcgagttctatcacaaatgtgataacgaatgtatggagagcgtaagaaatgggacgtatgactaccctaagtattcagaagaagcaatattaaaaagagaagaaataagcggagtgaaattagaatcaataggaacttaccagatactgtcaatttattcaacagtggcgagttccctagcactggcaatcatagtggctggtctatctttatggatgtgctctaatgggtcgttacaatgcagaatttgcatctaaatttgtgagctcagattgtaatta
| 0 | 2 | 0.5 | 0 | 341 |
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75 | 15,172 | 342 |
KJ672473.1
|
Homo sapiens
|
Human orthopneumovirus
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
KJ672473.1 |Human respiratory syncytial virus strain RSVB/Homo sapiens/USA/LA2_24/2012, complete genome|set:KJ672473|Human orthopneumovirus||2014-05-09T00:00:00Z|J. Craig Venter Institute|USA|Das,S., Halpin,R.A., Bera,J., Fedorova,N., Tsitrin,T., Stockwell,T., Amedeo,P., Bishop,B., Gupta,N., Hoover,J., Katzel,D., Schobel,S., Shrivastava,S., Hartert,T., Moore,M., Chappell,J., Larkin,E., Wentworth,D.E., Anderson,L.J.||Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15172|GenBank||||USA: Tennessee|USA|TN|Homo sapiens||2012-12-04||PRJNA225816
|
tatttaagtctaatctttttaatcagaaatggggtgcaattcactgagcatgataaaggttagattacaaaatttatttgacaatgatgaagtagcattgttaaaaataacatgttatactgacaaattaattcttctgactaatgcattagctaaagcaacaatacatacaattaaattaaacggcatagtttttatacatgttataacaagcagtgaagtgtgccctgataacaatattgtagtgaaatctaactttacaacaatgccaatattacaaaatggaggatacatatgggaattgattgaattgacacactgctctcaattaaatggtctaatagatgataattgtgaaatcaaattttctaaaagactaagtgactcagtaatgactgattatatgaatcaaatatctgatttacttgggcttgatctccattcatgaattatgtttagtctaattcaatagacatgtatttattaccattttagttaatataaaacctcatcaaagggaaatggggcaaataaactcacccaatcaatcaaaccatgagcactacaaacgacaacaccaccatgcaaagactgatgatcacagacatgagacccctgtcgatggactcaacaataacatctctcaccaaagaaatcatcacacacaaattcatatacttgataaacaatgaatgtattgtaagaaaactcgatgaaagacaagctacatttacattcctagtcaattatgagatgaagctattgcacaaagtaggaagtaccaaatacaagaaatactctgaatataatacaaaatatggcacattccctatgcctatatttatcaatcatggcgggtttctagaatgtattggcattaagcctacaaaacatactcctataatatacaaatatgacctcaacccgtaacttccaacaaaaaaaccaactcatccaaaccaagcaattctctaaacaacagtgctcaacagttaagaaggagctaatccattttagtaattaaaaataagggtgaagccagtaacataaattggggcaaatacaaagatggctcttagcaaagtcaagctgaatgatacattaaataaggaccagctactgtcatccagcaaatacactattcaacgtagtacaggagataatattgacactcccaattatgatgtgcaaaaacacctaaacaaactatgtggtatgctattaatcactgaagatgcaaatcataaattcacaggattaataggtatgctatatgctatgtccaggttaggaagggaagacactataaagatacttaaagatgctggatatcatgttaaagctaatggagtagatataacaacatatcgtcaagatataaatggaaaggaaatgaaattcgaagtattaacattatcaagcttgacatcagaaatacaagtcaatattgagatagaatctagaaagtcctacaaaaaaatgctaaaagagatgggagaagtggctccagaatacaggcatgattctccagactgtgggatgataatactgtgtatagctgcccttgtaataaccaaattagcagcaggagatagatcaggtctaacagcagtaattaggagggcaaacaatgtcttaaaaaacgaaataaaacgctacaagggcctaataccaaaggacatagccaacagtttttatgaagtgtttgaaaaacaccctcatcttatagatgtttttgtgcactttggcattgcacaatcatccacaagagggggtagtagagttgaaggaatctttgcaggattgtttatgaatgcttatggttcaggacaagtaatgctaagatggggagttttggccaaatctgtgaaaaatatcatgctaggacatgctagtgtccaagcagaaatggagcaagttgtggaagtctatgagtatgcacagaagttgggaggagaagctggtttctatcatatattgaacaatccaaaagcatcattgctgtcattaactcaatttcctaacttctcaagtgtggtcctaggcaa
| 0 | 10 | 0.1 | 0 | 342 |
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|
75 | 15,172 | 346 |
KJ672473.1
|
Homo sapiens
|
Human orthopneumovirus
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
KJ672473.1 |Human respiratory syncytial virus strain RSVB/Homo sapiens/USA/LA2_24/2012, complete genome|set:KJ672473|Human orthopneumovirus||2014-05-09T00:00:00Z|J. Craig Venter Institute|USA|Das,S., Halpin,R.A., Bera,J., Fedorova,N., Tsitrin,T., Stockwell,T., Amedeo,P., Bishop,B., Gupta,N., Hoover,J., Katzel,D., Schobel,S., Shrivastava,S., Hartert,T., Moore,M., Chappell,J., Larkin,E., Wentworth,D.E., Anderson,L.J.||Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15172|GenBank||||USA: Tennessee|USA|TN|Homo sapiens||2012-12-04||PRJNA225816
|
ttacacacatcacctctgtgcaccaccaacatcaaggaaggttcaaatatttgtttaacaaggactgatagaggatggtactgtgataatgcaggatcagtatccttctttccacaggctgacacttgtaaagtacagtccaatcgagtattttgtgacactatgaacagtttgacattaccaagtgaagtcagcctttgtaacactgacatattcaattccaagtatgattgcaaaattatgacctcaaaaacagacataagcagctcagtaattacttctctaggagctatagtgtcatgctatggtaaaactaaatgcactgcatccaacaaaaatcgtggaattataaagacattttctaatggttgtgattatgtgtcaaacaaaggagtagatactgtatcagtgggcaacactttatactatgtcaacaagctggaaggcaaaaacctttatgtaaaaggggaacctataataaattactatgaccctctagtgtttccttctgatgagtttgatgcatcaatatctcaagtcaatgaaaaaattaatcaaagtttagcttttattcgtagatccgatgaattattacataatgtaaatactggaaaatctactacaaatattatgataactgtaattattatagtaatcattgtagtattgttatcattaatagctattggtttactgttgtattgcaaagccaaaaacacaccagttacactaagcaaagaccaactaagtggaatcaataatattgcattcagcaaatagacaaaaaaccacctgatcatgtttcaacaacaatccgctaaccactaatcccaaatcaacttataacaaatacttcaacatcacagcacaggctgaatcatttcctcgcatcatgctacccacacaactaagctagatctttaactcatagttacataaaaacctcaaatatcgcaatcaacactaagtcaacacatcattcacaaaactaacagctggggcaaatatgtcgcgaagaaatccctgcaaatttgagattagaggtcattgcttgaatggtagaagatgccactacagtcataattactttgaatggcctcctcatgcattactagtgaggcaaaacttcatgttaaacaagatactcaagtcaatggacaagagcatagacactttgtctgaaataagcggagctgctgaacttgatagaacagaagaatatgctcttggtatagttggagtgctagagagttacataggatctataaacaacataacaaaacaatcagcatgtgttgctatgagtaaacttcttattgagatcaatagtgatgacattaaaaagctgagagacaatgaagaacccaattcacctaagataagagtgtacaatactgttatatcatacattgagagcaatagaaaaaacagcaagcaaaccatccatctgctcaaacgattaccagcagacgtgctgaagaagacaataaagaacacattagatatccacaaaagcataaccataagcaacccaaaagagtcaaccgtaagtgatcaaaatgaccaaaccaaaaataatgatattaccggataaatatccttgtagtatatcatccatattaatctcaagtgaaagcatgattgctacattcaatcataaagacatattacaatttaaccacaaccatttggataaccaccagtggttattaaatcatatatttgatgaaattcattggacacctaaaaacttattagatgccactcaacaatttctccaacatcttaacatccctgaagatatatatacagtatatatattagtgtcatgatgcttgatcataacgattctatatcatccaaccataaaactgtcttaataaggttatgggacaaaatggatcccattattaatggaagctctgctaatgtatatctaactgatagttatctaaaaggtgttatctctttttcagaatgtaatgctttagggagttacctttttaacggcccttatcttaaaaatgattacaccaacttaattagta
| 4 | 10 | 0.5 | 0 | 346 |
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|
75 | 15,172 | 348 |
KJ672473.1
|
Homo sapiens
|
Human orthopneumovirus
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
KJ672473.1 |Human respiratory syncytial virus strain RSVB/Homo sapiens/USA/LA2_24/2012, complete genome|set:KJ672473|Human orthopneumovirus||2014-05-09T00:00:00Z|J. Craig Venter Institute|USA|Das,S., Halpin,R.A., Bera,J., Fedorova,N., Tsitrin,T., Stockwell,T., Amedeo,P., Bishop,B., Gupta,N., Hoover,J., Katzel,D., Schobel,S., Shrivastava,S., Hartert,T., Moore,M., Chappell,J., Larkin,E., Wentworth,D.E., Anderson,L.J.||Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15172|GenBank||||USA: Tennessee|USA|TN|Homo sapiens||2012-12-04||PRJNA225816
|
atagaattataaaagggtttgtaaatacctacaacagatggcccactttaaggaatgctattgtcctacctctaagatggttaaactattataaacttaatacttatccatctctacttgaaatcacagaaaatgatttgattattttatcaggattgcggttctatcgtgagtttcatctgcctaaaaaagtggatcttgaaatgataataaatgacaaagccatttctcctccaaaagatctaatatggactagttttcctagaaattacatgccatcacatatacaaaattatatagaacatgaaaagttaaagttctctgaaagcgacagatcaagaagagtactagagtattacttgagagataataaattcaatgaatgtgatctatacaattgtgtagttaatcaaagctatctcaacaactccaatcatgtggtatcactaactggtaaagaaagagagctcagtgtgggtagaatgtttgccatgcaaccaggtatgtttaggcaaatccaaatcttagcagagaaaatgatagccgaaaatattttacaattcttccctgagagtttgacaagatatggtgatctagagcttcaaaagatattagaattaaaagcaggaataagcaacaagtcaaatcgttataatgataactacaacaattatatcagtaaatgttctataataacagatcttagcaaatttaatcaagcatttagatatgaaacatcatgtatctgcagtgatgtattagatgaactgcatggggtacaatctctattctcttggttgcatttaacaatacctcttgtcacaataatatgtacatatagacatgcaccaccttttataaaggatcatgttgtcaatcttaatgaagttgatgaacaaagtgggttatacagatatcatatgggtggtattgagggctggtgtcaaaaactgtggaccattgaagccatatcattattagatctaatatctcttaaaggtaaattctccatcacagctctgataaatggtgataatcagtcaattgatataagtaaaccagttagacttatagagggtcagacccatgctcaagcagattatttgttagcattaaatagccttaaattgctatataaagagtatgcaggcataggccataagcttaagggaactgagacctatatatcccgagatatgcagttcatgagcaaaacaatccagcacaatggagtgtactatccagccagtatcaaaaaagtcctgagagtgggtccatggataaatacaatacttgatgattttaaagttagtttagaatctataggtagcttaacacaggagttagaatacagaggagaaagcttattatgcagtttaatatttaggaacatttggttatacaatcaaattgctctgcaactccgaaatcatgcattatgtaacaataagctatatttagatatattgaaagtattaaaacacttaaaaaccttttttaatcttgatagtatcgatacggcgttatcattgtatatgaacttgcctatgctgtttggtggtggtgatcccaatttgctatatcgaagcttttataggagaactccagacttccttacagaagctatagtacattcagtgttcgtgttgagctattatactggtcacgatctacaagataagctccaggatcttccagatgatagactgaacaaattcttgacttgtgtcatcacatttgataaaaatccaaatgccgagtttgtaacattgatgagggatccacaggctttagggtctgaaaggcaagctaagattactagtgagattaatagattagcagtaacagaagtcttaagtatagctccaaacaaaatattttctaaaagtgcgcaacactatactaccactgagattgatctaaatgacattatgcaaaatatagaacctacttaccctcatggattaagagttgtttatgaaagtttacctttttataaagcagaaaaaatagttaatcttatatcaggaacaaaatccataactaat
| 6 | 10 | 0.7 | 0 | 348 |
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] |
|
75 | 15,172 | 349 |
KJ672473.1
|
Homo sapiens
|
Human orthopneumovirus
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
KJ672473.1 |Human respiratory syncytial virus strain RSVB/Homo sapiens/USA/LA2_24/2012, complete genome|set:KJ672473|Human orthopneumovirus||2014-05-09T00:00:00Z|J. Craig Venter Institute|USA|Das,S., Halpin,R.A., Bera,J., Fedorova,N., Tsitrin,T., Stockwell,T., Amedeo,P., Bishop,B., Gupta,N., Hoover,J., Katzel,D., Schobel,S., Shrivastava,S., Hartert,T., Moore,M., Chappell,J., Larkin,E., Wentworth,D.E., Anderson,L.J.||Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15172|GenBank||||USA: Tennessee|USA|TN|Homo sapiens||2012-12-04||PRJNA225816
|
gagctattatactggtcacgatctacaagataagctccaggatcttccagatgatagactgaacaaattcttgacttgtgtcatcacatttgataaaaatccaaatgccgagtttgtaacattgatgagggatccacaggctttagggtctgaaaggcaagctaagattactagtgagattaatagattagcagtaacagaagtcttaagtatagctccaaacaaaatattttctaaaagtgcgcaacactatactaccactgagattgatctaaatgacattatgcaaaatatagaacctacttaccctcatggattaagagttgtttatgaaagtttacctttttataaagcagaaaaaatagttaatcttatatcaggaacaaaatccataactaatatacttgaaaaaacatcagcaatagatacaactgatattaatagggctactgatatgatgaggaaaaatataaccttacttataaggatacttccattagattgtaacaaagacaaaagagagttattaagtctagaaaatcttagcataactgaattaagcaagtatgtaagagaaagatcttggtcattatccaatatagtaggagtaacatcgccaagtattatgttcacaatggacattaaatatacaactagcactatagccagtggtataattatagaaaaatataatgttaatagtttaactcgtggtgaaagaggacctactaagccatgggtaggttcatctacgcaggagaaaaaaacaatgccagtgtacaatagacaagttttaaccaaaaagcaaagagaccaaatagatttattagcaaaattagactgggtatatgcatccatagacaacaaagatgaattcatggaagaactgagtactggaacacttggactgtcatatgaaaaagccaaaaagttgtttccacaatatctaagtgtcaattatttacaccggttaacagtcagtagtagaccatgcgaattccctgcctcaataccagcttatagaacaacaaattatcattttgatactagtcctatcaatcatgtattaacagaaaagtatggagatgaagatatcgacattgtgtttcaaaattgcataagttttggtcttagcttgatgtcagttgtggaacaattcacaaacatatgtcctaatagaattattctcataccgaagctgaatgagatacatttgatgaaacctcctatatttacaggagatgttgatatcatcaagttgaagcaagtgatacaaaaacagcatatgttcctaccagataaaataagtttaacccaatatgtagaattattcttaagtaacaaagcacttaaatctggatcccacatcaactctaatttaatattagtacataaaatgtctgattattttcataatgcgtatattctaagtactaatttagctggacattggattctgattattcaacttatgaaagattcaaaaggtatttttgaaaaagattggggagaggggtatataactgatcatatgttcattaatttgaatgttttctttaatgcttataagacttatttgctatgttttcatagaggttatggtaaagcaaaattagaatgtgatatgaacacttcagatcttctttgtgttttggagttaatagacagtagctactggaaatctatgtctaaagttttcctagaacaaaaagtcataaaatacatagtcagtcaagacacaagtttgcatagaataaaaggctgtcacagttttaagttgtggtttttaaaacgccttaataatgctaaatttaccgtatgcccttgggttgttaacatagattatcacccaacacacatgaaagctatattatcttacatagatttagttagaatggggttaataaatgtagataaattaaccattaaaaataaaaacaaattcaatgatgaattttacacatcaaatctcttttacattagttataacttttcagacaacactcatttgctaacaaaacaaataagaattgctaattcagaattag
| 7 | 10 | 0.8 | 0 | 349 |
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|
75 | 15,172 | 350 |
KJ672473.1
|
Homo sapiens
|
Human orthopneumovirus
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
KJ672473.1 |Human respiratory syncytial virus strain RSVB/Homo sapiens/USA/LA2_24/2012, complete genome|set:KJ672473|Human orthopneumovirus||2014-05-09T00:00:00Z|J. Craig Venter Institute|USA|Das,S., Halpin,R.A., Bera,J., Fedorova,N., Tsitrin,T., Stockwell,T., Amedeo,P., Bishop,B., Gupta,N., Hoover,J., Katzel,D., Schobel,S., Shrivastava,S., Hartert,T., Moore,M., Chappell,J., Larkin,E., Wentworth,D.E., Anderson,L.J.||Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15172|GenBank||||USA: Tennessee|USA|TN|Homo sapiens||2012-12-04||PRJNA225816
|
gttttggagttaatagacagtagctactggaaatctatgtctaaagttttcctagaacaaaaagtcataaaatacatagtcagtcaagacacaagtttgcatagaataaaaggctgtcacagttttaagttgtggtttttaaaacgccttaataatgctaaatttaccgtatgcccttgggttgttaacatagattatcacccaacacacatgaaagctatattatcttacatagatttagttagaatggggttaataaatgtagataaattaaccattaaaaataaaaacaaattcaatgatgaattttacacatcaaatctcttttacattagttataacttttcagacaacactcatttgctaacaaaacaaataagaattgctaattcagaattagaagataattataacaaactatatcacccaaccccagaaactttagaaaatatatcattaatccctgttaaaagtaataatagaaacaaacctaaattttgtataagtggaaatactgaatctatgatgacgtcaacattctctaataaaatgcatattaaatcttctactgttaccacaagattcaattatagcagacaagacttgtacaatttatttccaattgttgtgatagacaggattatagatcattcaggtaatacagaaaaatctaaccaactttacaccaccacttcacatcagacatctttagtaaggaatagtgcatcactttattgcatgcttccttggcatcatgtcaatagatttaactttgtatttagttccacaggatgcaagatcagtatagagtatattttgaaagatcttaagattaaggatcccagttgtatagcattcataggtgaaggagctggtaacttattattacgtacggtagtagaacttcatcctgacataagatatatttacagaagtttaaaagattgcaacgatcatagtttacctattgaatttctaaggttatacaacgggcatataaacatagattatggtgagaatttaaccattcctgccacagatgcaactaacaacatacattggtcttatttacatataaaatttgcagaacctgttagtatctttgtttgcgatgctgaattacctgtcacagccaattggagtaaaattataattgaatggagtaagcatgtaagaaagtgcaaatactgttcttctgtaaatagatgcattttaattgcaaaatatcatgctcaagatgatattgatttcaaattagataacattactatattaaaaacttatgtgtgcctaggcagcaagttaaaaggatctgaagtttacttagtccttacaataggacctgcaaatatacttcctgtttttgatgttgtgcaaaatgctaaattgatcctttcaagaactaaaaatttcattatgcctaaaaagattgacaaggaatctatcgatgcaaatattaaaagcttaatacctttcctttgtcaccctataacaaaaaatggaattaagacttcattgtcaaaattgaagagtgtagttaatggagatatattatcatattctatagctggacgtaatgaagtattcagcaacaagcttataaaccacaagcatatgaatatcttaaaatggctggatcatgttttaaactttagatcagctgaacttaattacaatcatttatacatgatagagtccacatatccttacttaagtgaattgttaaatagtttaacaaccaatgagcttaagaagctgattaaaataacaggtagtgtactatacaaccttcctagtgaacagtaacttaaaatatcattaacaagtttggtcaaatttagatgctaacacatcattatattatagttattaaaaaatatgcaaacttttcaataatttagcatattgattccaaaattatcattttaatcttaagggattaaataaaagtctaaaactaacaattacacatgtgcatttacaacaca
| 8 | 10 | 0.9 | 0 | 350 |
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|
76 | 14,910 | 352 |
ON571710.1
|
Sus scrofa
|
Betaarterivirus suid 1
|
Betaarterivirus suid 1
|
Arteriviridae
|
Betaarterivirus
|
ssRNA(+)
|
ON571710.1 |Betaarterivirus suid 1 isolate R31, complete genome||Betaarterivirus suid 1||2022-12-14T00:00:00Z|Universitat Autonoma de Barcelona, Sanitat i Anatomia Animals, Facultat de Veterinaria||Martin-Valls,G.|R31|Betaarterivirus suid 1|Betaarterivirus|complete|Arteriviridae|ssRNA(+)|14910|GenBank||||Spain|Spain||Sus scrofa||2021-10||
|
ccgtagttcgagctcgtgcttgccccaacgctaagtaccttgttaaactcaatggagttcattgggaagtagaaatgaggccgagcgtgatccctctctccctttctcgcgaatgtgtggttggtgtttgttctgaaaactgcaccgcacagccttttccagagggggggttgcctgaccgggctctcgaggccttggcgtttgcctacaggctcccttctgattgtgtctgtgacgctgttgctgactttctctccgacccgccctctcaagactcctggaccctcgacaaaatgctaacctccccgtcacccgaacaatccgggttttccagtttatacaaactgttattggaggttgttccgcagaggtgtggggccacagagggagcttttgtttatgccgtcgagaggatgttgaaggattgtccaagctccaaacaagccatggcccttttgggaaagattaaggtcccgtcctcgaaggcctcatctgtgtccctggacgagtgtttccctacgaatgctccaattaactctgggtcggcgcttcaagaagtaccccaaaatcctggcattgccaccgacccctgttcactggacgcaaaagagcacaaggaggcgggctctgaggagtctcaaaagggtgatggtgagaccatccattcttgtgaggacggaccgctggacctgtcacaatcggccctagcctctgcaacggctcccgttaaggatcaagcattcaacaatccggtccccagtgttgacattcacccaactgtcgtctcagaaccaatcctagcggagcttacccatcgttctgctgagcattacggtgtgaaaccgagtgacgacggtttgcctttggatttgtccaaagagcagcctccggaccagcccctggacttgtctctatctgcttggccggtgagggccactgcatctgaacccgactgggcttgtggtaggcgcgagcccgtttttgtgaagcctcgcggcgtcttctccgatagcgagtcagtctttcaattcggaggactttctgagaccagctccatcatagagtttgatcgcacagaggaagctccggcagttggcgcctccatcaatccaacaacatcaaatgaagcttcccccggagtggacccttttgagtctgtcagactcgagcgcccgcgtttctccgcacaagccttgatagatcgaggcggtccgcttgctgatgtccatgcaaagacaaaaagtcgggtgtatgagcagtgcctccaggcttgcgaacctggcagtcgtgcaactccagccaccaagaagtggctcgataagatgtgggagagggttgacatgaagacttggcattgtacctcgcagtaccaagctggctatatacttgggtccctcaagtttctccctgacatgattcaggaaacgccacctcctgtccccaggaagggtcgggcttgtgacactgacagtctgaagcaactggtggcacggtgggagaaaaaactgaacgcgacccccccccctggaccagtcgaaacggcacccaaccagacaacccccgcgcccgatgacacccagcgaagggatgccgccccttccgatgggccatcccgtacaccgggtcttcctggtaaaacgggtctgggcgggagttggaggggcttagtgtcctttggttctcgtcttgtggggtccaccagtcagcgcttcatgacatgggtttttgaaacttattcccatctcccagcctttgtactcgcacttttctcgccgcggggctctatggttgcaagtgattggctgtttgcaggtgtcgttttacttgcacttctgttatgccgttcttgcccaatactcgggtgcctaccactattgggtgtcttttctggttctgtgcggtgtgttcgtctgggtgtttttggttcttggatggcttttgctgtatttttattctcaactccaaccaacccaatcggttcttcttgcgaccacgattcgccggagtgtcatgctgagcttttggctcttgagcagcgccaactttgg
| 1 | 10 | 0.2 | 0 | 352 |
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|
76 | 14,910 | 353 |
ON571710.1
|
Sus scrofa
|
Betaarterivirus suid 1
|
Betaarterivirus suid 1
|
Arteriviridae
|
Betaarterivirus
|
ssRNA(+)
|
ON571710.1 |Betaarterivirus suid 1 isolate R31, complete genome||Betaarterivirus suid 1||2022-12-14T00:00:00Z|Universitat Autonoma de Barcelona, Sanitat i Anatomia Animals, Facultat de Veterinaria||Martin-Valls,G.|R31|Betaarterivirus suid 1|Betaarterivirus|complete|Arteriviridae|ssRNA(+)|14910|GenBank||||Spain|Spain||Sus scrofa||2021-10||
|
cgggagttggaggggcttagtgtcctttggttctcgtcttgtggggtccaccagtcagcgcttcatgacatgggtttttgaaacttattcccatctcccagcctttgtactcgcacttttctcgccgcggggctctatggttgcaagtgattggctgtttgcaggtgtcgttttacttgcacttctgttatgccgttcttgcccaatactcgggtgcctaccactattgggtgtcttttctggttctgtgcggtgtgttcgtctgggtgtttttggttcttggatggcttttgctgtatttttattctcaactccaaccaacccaatcggttcttcttgcgaccacgattcgccggagtgtcatgctgagcttttggctcttgagcagcgccaactttgggaacctgttcgtggccttgttgttggcccctcgggtctcttatgcgtcattcttggtaggctactcggtgggtcacgttatctctggcatattgtcttacgtttatgcatgcttgcagacctggccctttctctcgtttatgtggtgtcccaagggcgttgttacaagtgttggggaaagtgtataagaacagctcctgcagaggtagccctcaatgtgttccccttctcgcgtgccactcgttcctctctcgtgtccttatgcgatcggtttcgagcgccaaaaggggttgaccccgtacatttggcaacaggctggcgcgggtgttggtgtggtgatagccccatccatcagccgcaccagaagcctatagcttatgccaacctggacgagaagaagatatccgcccaaacggtggtggccgtgccgtatgaccccaaccaggccatcaaatgcttgaaagttcttcaggcaggtggagccattgtagatcaacctgtgcccgaagtcatccgtgtgtccgaggtccctttttcagctccatttttcccaaaagtcccggtcaacccaaattgtagggtcgtggtggactcggacacctttgtggccgcagttcgctgtggttactcgaccgcacaactgattctaggccaaggcaactttgctaagttaaaccagacccactccaagaactccgcctccactaagactattggtggagcctcttacgctcttgctgtgactcaggtggctgtatggacccttatgcacttcattctcggtctttggttaacatcgcctcaggtgtgtggtcgagggacctctgatccgtggtgttcaaatcctttttcataccctacctatggtcctggagttgtgtgttcctcccgactttgtgtgtctgccgacggggttaccctgccactgttttcagccgtagctcaactctctggaagagaagtggggattttcattttggtacttgtctccctgcttaccctagcccatcgcctggctctcaaggcggatatgctgatggtttttttggcattttgcgcttatgcctggcccttgagttcctggttgatttgtttcttccccatacttctaaagtgggtcaccctccaccccctcaccatgctttgggtacattcatttctggtgttctgcctgccagccgccggcgtcctttcgataggtgtaaccggtttcctttgggcactcggccgttttactcaggttgccgggattatcacaccttatgatatccaccagtacacctctgggccgcgtggtgcggccgctgtagcgacggcccctgaaggcacctacatggctgctgtccggagagccgccctgactggccggactttgattttcacaccatctgcggttggatccctccttgaaggtgctttcaggactagtaagcccagccttaacacggtgaatatcgtgggttcttccctcggctccggaggggtcttcaccatagatggcaggaagatagtcatcaccgccacccatgtgctaaatggtgatgcagctagggtcaccggtgattcttacaatcgtatgcacaccttcaagaccaatggcgattacgcctggtctcacgccgacgactggcagggtgtcgctcctgcag
| 2 | 10 | 0.3 | 0 | 353 |
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|
76 | 14,910 | 355 |
ON571710.1
|
Sus scrofa
|
Betaarterivirus suid 1
|
Betaarterivirus suid 1
|
Arteriviridae
|
Betaarterivirus
|
ssRNA(+)
|
ON571710.1 |Betaarterivirus suid 1 isolate R31, complete genome||Betaarterivirus suid 1||2022-12-14T00:00:00Z|Universitat Autonoma de Barcelona, Sanitat i Anatomia Animals, Facultat de Veterinaria||Martin-Valls,G.|R31|Betaarterivirus suid 1|Betaarterivirus|complete|Arteriviridae|ssRNA(+)|14910|GenBank||||Spain|Spain||Sus scrofa||2021-10||
|
aaaccgtgtctgtgcaggagacccgaagcctaggcgggtccaggttcagtatctgtaccgttgtgcccaacacacccattgacgccttgactggcatcccgctccagactccgaccccactctttgaaaacggccctcgccatcgcggtgaggatgatgaccttaaagttgagagggtgaagaaacactgcatctcccttggcttccatgacatcaatggcaagatttactgcaagatctgggacaagtccaccggtgacaccttctatacagatgatccccggtacacccgagaccatgcctttcaggacaggtcagctgactacagagacagggattatgaaggtgttcaaaccgcccctcatcaagggtttgacccaaagtctgaaacccctgttggcactgttgtgattggcggtattacgtacaatagatacctagtcagaggcaaggagatattggtccccaaacctgacaatcatttcgaagccgctaagctttctctcgaacaagccctcgccggaatgggccagacctgtgacctcacagctgccgaggtggaaaagctgaagcgcattatcgatcaactccagggcttgaccactgaacaggctttaaactgttagccgccagcggcttgacccgctgtggccgcggcggcttggttgtgacagaaacggcggtgaaaattgtaaaataccatagcaggacgtttaccttgggccccttggatctaaaagtcacttctgaggcggaggtgaagaagtcaactgagcagggccatgctgtagtagcaaacttgtgctctggtgtcatcctaatgaggcctcacccaccatccctcgttgatgttcttctgaaacccgggcttgacacaacacctggcattcaaccggggcatggagccgggaacatgggtgttaacggcgccatttgggattttgaaaccgcgcctacaaaggcagagcttgaattgtccaagcaaataatccaggcctgtgaggttaggcgcggggacgccccgaacctccaactcccctacaagctctaccctgttaggggggaccctgaacgacgcaatggtcgtctcatcaacaccaggttcggagatttgccctacaagacccctcaagacaccaaatccgcgatccatgcggcttgctgcctgcatcctaacggcgtcccagtgtctgacggcaaatccacagtaggctctacccttcagcgcggctttgagctttatgtacctacggtgccttatagtgtcttagagtaccttgactcacgccctgacactcccctcatgtgcaccaaacacggtacccctgaagctgctgcagaagacctccaaaagtacaacctgtccactcaagggtttgttctgccaggagtccttcgcctagttcgcaaattcatctttggtcatgttgggaaggcaccgccactgttccttccatcaacttatcctgccaaaaactctatggcgggaatcaatggccaaaggttcccgacaaaggatgtccagagcatacctgaagttgatgagatgtgcgctcgagccgtcaaagagaattggcagactgtgacgccttgcaccctcaagaaacaatactgttccaaactcaagactaggaccattctgggtactaacaacttcattgccttggcgcatagatcggcactcagtggtgtcacccaggcgttcatgaagaaagcttggaattccccgattgccctggggaagaacaaatttaaagagctgcactgtactgtcgccggcaggtgcctcgaggccgacttagcttcctgtgatcgcagtactcctgctatcgtgaggtggtttactgccaatctcctgtatgaacttgcagggtgtgaggagtacttgcctagctatgtgctcaactgctgtcatgatctcgtggcggctcaggatggcgctttcacaaaacgtggtggcctgtcatccggggaccccgtaaccagtgtgtccaacaccgtgtattcgctgataatttatgcccagcacatggtgctgtcggccctga
| 4 | 10 | 0.5 | 0 | 355 |
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|
76 | 14,910 | 357 |
ON571710.1
|
Sus scrofa
|
Betaarterivirus suid 1
|
Betaarterivirus suid 1
|
Arteriviridae
|
Betaarterivirus
|
ssRNA(+)
|
ON571710.1 |Betaarterivirus suid 1 isolate R31, complete genome||Betaarterivirus suid 1||2022-12-14T00:00:00Z|Universitat Autonoma de Barcelona, Sanitat i Anatomia Animals, Facultat de Veterinaria||Martin-Valls,G.|R31|Betaarterivirus suid 1|Betaarterivirus|complete|Arteriviridae|ssRNA(+)|14910|GenBank||||Spain|Spain||Sus scrofa||2021-10||
|
aacttcaccccgtcggctttgactcctgctgttatgttttcgatcagatgcctcacaaacaattgacaaccatttacaggttcggccccaacatctgcgctgccatccagccttgttacagggagaagcttgagtccaaggcaaggaacactagggtggtcttcaccgctcgacctgtggcttatgggcaagtgctgacgccatttcacaaggatcgtgtcggctcagccataactatagattcatctcagggggccacctttgatgttgtgacgctgcatctgccgacaccaaaatccttgaataaatcccgggcactcgtagctatcactcgagcaaggcacgggttgttcatttacgatccccatagccagcttcaggaatttttcaacctagttcccgagcgcactgattgcaacctcgtgttcaaccgcggggacgagctagtcgtcctgaattcagataatgaagttacgaccgtagcgaaggtcctggaggccggcccgtcccagtttcgggtatcagatacaaaatgcaagtccctcttggccgcctgttcagtcagtatggaagggagctgcatgccgctaccgcaagtggctcacaacttagggttttacttttccccagacagtccggcgttcgcgcccctgccaaaagaattggcaccgcattggccagtggtcacctaccagaacaaccgggcatggcctgaccggcttgtcgccagtatgcgtccaattgatgcctgttacagtaagcccatggtcggtgcagggtatgtggttggaccgtccacttttcttggaactcctggcgtggtatcatactacctcaccttgtacatcaagggtgagcctcaggccttaccagaaacactcgtctcaacaggacgcatagccacagactgtcgggagtaccttgatacggccgaagaggaagtggccaaagaactccctcacgctttcattggcgatgtcaaaggaaccacagtgggggggtgccatcacatcacatcaaagtatctacctaggtccctacctaaagactctgtcgccgttgttggtgtgagttcgcccggcaaggctgcgaaggccgtgtgcactctaactgatgtgtaccttcccgaccttcgaccatacctacaaccggaaaccgcatcaaaatgctggaaacttaaattggacttcagggacgttagactaatggtttggaaaggggccactgcctattttcaattggaagggctcacatggtcagcgttaccagactatgctaggtttattcagttacccaaagatgccgttgtgtacattgacccatgtataggaccggcaacagccaaccgtaaggtggtgcgaaccactgactggcatgctgacctggcagtgacaccatatgattacggtgcccaaaccattctaacaacagcctggttcgaggacctcggaccgcaatggaagatcctggggctgcagccttttaagcgggcgttcggcttcgaaaacactgaggactgggcggtccttgcgcgccgcatggacgacggcaaggattacaccgactataattggacttgtgtccgagaacgcccgcgcgctatctacgggcgcgcccgtgaccacacgtatcactttgcccctggcacagtgttgcaggtagagttgggtagaccccggccactgcctgagtgatcattgaccttgaagcgatgcaatggggtctctgtggagcaaaatcacccagctgtttgtggatgccttcactgagtttcttgttagtgtggttgatattgtcatcttccttgccatactgttcgggttcaccgccgcaggatggcttttggtctttctactcagaatggtttgctccgcgattctccgttcgcgcattgccattcactctcccgagctatcgaaggtcttatgaaggcttgttgcccaattgcagaccagatgtcccacagttcgcaatcaaacacccattgggcatgttctggcatatgcgagtttctcgcctgattgatgaaatggtctcccatcgcgtgt
| 6 | 10 | 0.7 | 0 | 357 |
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] |
|
76 | 14,910 | 359 |
ON571710.1
|
Sus scrofa
|
Betaarterivirus suid 1
|
Betaarterivirus suid 1
|
Arteriviridae
|
Betaarterivirus
|
ssRNA(+)
|
ON571710.1 |Betaarterivirus suid 1 isolate R31, complete genome||Betaarterivirus suid 1||2022-12-14T00:00:00Z|Universitat Autonoma de Barcelona, Sanitat i Anatomia Animals, Facultat de Veterinaria||Martin-Valls,G.|R31|Betaarterivirus suid 1|Betaarterivirus|complete|Arteriviridae|ssRNA(+)|14910|GenBank||||Spain|Spain||Sus scrofa||2021-10||
|
cagcaacatcatttggtggtcggtcacgtccgactactgcatttcttaaccccgtctgccatgaggtgggccacaaccattgcctgtttgttcgccattctcctggcgatatgagatgttctcacaggttggggcgtaccttgacactctatccttgttattgttggctttttttgttgtgtaccggcttgtcttggtcctttgccgatggcaacggcaacagctcgacataccaatacatatataacttgacgatatgcgagctgaatgggaccgaatggctgtccggtcacttccaatgggcagtcgaaacttttgtactttacccggttgttacccacgttatttcattgggttttctcacaacaagtcatttctttgacacacttggccttggagtcgtgtccgtcataggcttttgtaacaagcggtatgtgctcagcagcgtgtatggcgtctgcgcacttgcggcgctcatatgttttgtcatccgtgccgccaaaaattgcatggcatgccgctatgcccgtacccggttcaccaattttattgtggacgaccgggggaagattcatcgatggaaatcttcaatagtggtggagaagctgggcaaagctgaagttggcaatgaccttatcaccgtcaaacatgtcgtcctcgaaggggcaaaagctcaacccctaacgagaacttcggctgagcaatgggaagcctagatgacttttgcggtgatcataccgccgcgcaaaagctaatactagctttcagcattacctatacacctgtgatgatatatgctcttaaggtgtcacgcggccgactcctaggacttttgcacatcctaatctttctgaactgctccttcacgttcggatatatgacatatgcacattttgagtctactaataaggtcgcactcactatgggagccgttgttgccctcctgtggggcatttacagtttcatagagtcatggaagttcgtcacttccagatgcagattgtgttgcctaggccggcgatacattctggcccctgcccaccacgtagaaagtgctgcaggactccattcaatcccagcgtctggcaaccgagcatacgctgtgagaaagcccggtctaacctcagtgaacggcactctagtaccagggcttaggagcctcgtgttgggcggcaaaagagctgttaaacgaggagtggttaacctcgtcaagtatggccggtaaaaaccagagccagaagaagaagaaaaacacagctcccatggggaatggccagtcagtcaatcagctgtgtcagctgttgggaacaatgatgaaatcccagcgccagcggtctagggggggacaggctaaaaagaaaaagcctgagaagccacattttcccctagctgctgaagatgacgtccggcatcatctcactcataccgagcgtaccctctgtttgcagtcgatccagacggccttcaatcaaggcgcaggaactgcgtcgctttcatccagtgggaaggtcggttttcaggttgagtttatgctgccggttgctcatacggtacgcttgattcgcgtgacatccgcacccgatagtcagggtgtgaattaatttaatagtcaggtgaatggccacgattggcgtgtggcctctgagtcacctattcaattagggcgatcacatgggggttagacttaattggcgaaaccatgtgaccgaaattaaaaaaaaaaaaa
| 8 | 10 | 0.9 | 0 | 359 |
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|
77 | 1,167 | 360 |
KM886361.1
|
Equus caballus
|
African horse sickness virus
|
African horse sickness virus
|
spleen, abdominal cavity
|
Sedoreoviridae
|
Orbivirus
|
dsRNA
|
KM886361.1 |African horse sickness virus isolate HS13/63 segment 8, complete sequence|set:40e7343a7d5272ef37743d59b61d66aa14149523|African horse sickness virus||2015-03-16T00:00:00Z|Deltamune (Pty) Ltd, Research and Development|South Africa|Potgieter,A.C., Wright,I.M., van Dijk,A.A., Potgieter,C.A.|HS13/63|African horse sickness virus|Orbivirus|complete|Sedoreoviridae|dsRNA|1167|GenBank|3|8|1|South Africa: Malmesbury|South Africa||Equus caballus|spleen, abdominal cavity|1963||
|
gttaaaattcggttaggatggacgcgatagcagcaagagccttgtccgttgtacgggcatgcgtcacagtgacagatgcgagagttagcttggatccaggagtgatggagacgttagggattgcaattaataggtacaatggtttgacaaatcattcggtatcgatgaggccacagacccaagcggaacgaaatgaaatgttttttatgtgtactgatatggttttagcggcattgaacgtccaaattgggaatgtttcaccagattatgatcaggcgttggcaactgtgggagctctcgcaacgactgaaattccatataatgttcaggccatgaatgatattgttagaataacgggtcaaatgcaaacattcggaccaagcaaagtgcagacgggaccttatgcaggagcggttgaggtgcaacaatctggcagatattacgtaccgcaaggtcgaacacgtggtgggtacatcaattcaaatattgctgaagtgtgtatggatgcaggtgctgcgggacaggttaatgcgctgctagccccaaggaggggggacgcagtcatgatctatttcgtttggagaccattgcgtatattttgtgatcctcaaggtgcgtcacttgagagcgctccagggacttttgtcaccgttgatggagtaaatgttgcggctggagatgtcgtcgcatggaataccattgcaccagtgaatgttggaaatcctggggcacgcagatcaattttacagtttgaagtgttatggtatacgtccttggatagatcgctagacacggttccggaattggctccaacgctcacaagatgttatgcgtatgtttctcccacttggcacgcattacgcgctgtcatttttcagcagatgaatatgcagcctattaatccgccaatttttccaccgactgaaaggaatgaaattgttgcgtatctattagtagcttctttagctgatgtgtatgcggctttgagaccagatttcagaatgaatggtgttgtcgcgccagtaggccagatcaacagagctcttgtgctagcagcctaccactagtggctgcggtgttgcacggtcaccgctttcattagtgtcgcgtcggttcttatgctgataaagtacgcataagtaatacgtcaataccgaatacacttac
| 0 | 1 | 1 | 0 | 360 |
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81 | 10,690 | 363 |
EU249493.1
|
Homo sapiens
|
dengue virus type I
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU249493.1 |Dengue virus 1 isolate DENV-1/VN/BID-V796/2006, complete genome|set:EU249493|dengue virus type I||2008-03-04T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Crawford,M., Engels,R., Freedman,E., Howarth,C., Jen,D., Larson,L., Ledlie,T., Lewis,B., Montgomery,P., Park,D., Pearson,M., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., MacCallum,I., Vu,H.T., Nguyen,Q.H., Nguyen,Q.T., Duong,P.H., Nguyen,H.T., Wills,B., Le,L.B., Tran,T.T., Tran,H.T., Lander,E., Galagan,J., Nusbaum,C., Simmons,C.P., Birren,B.|DENV-1/VN/BID-V796/2006|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10690|GenBank||||Viet Nam: south|Viet Nam||Homo sapiens||2006||PRJNA31235
|
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|
81 | 10,690 | 364 |
EU249493.1
|
Homo sapiens
|
dengue virus type I
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU249493.1 |Dengue virus 1 isolate DENV-1/VN/BID-V796/2006, complete genome|set:EU249493|dengue virus type I||2008-03-04T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Crawford,M., Engels,R., Freedman,E., Howarth,C., Jen,D., Larson,L., Ledlie,T., Lewis,B., Montgomery,P., Park,D., Pearson,M., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., MacCallum,I., Vu,H.T., Nguyen,Q.H., Nguyen,Q.T., Duong,P.H., Nguyen,H.T., Wills,B., Le,L.B., Tran,T.T., Tran,H.T., Lander,E., Galagan,J., Nusbaum,C., Simmons,C.P., Birren,B.|DENV-1/VN/BID-V796/2006|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10690|GenBank||||Viet Nam: south|Viet Nam||Homo sapiens||2006||PRJNA31235
|
cacaacagttacaggaaagataattcatgaatggtgctgcagatcttgtacgctaccacccttacgtttcaaaggagaagatgggtgctggtacggtatggaaatcagaccagtcaaggaaaaggaagagaatctagtcaaatcaatggtctctgcagggtcaggggaagtggacagcttttcactaggactgctatgcatatcaataatgatcgaagaggtgatgaggtccagatggagtagaaaaatgctgatgactggaacactggctgtgttcttccttctcataatgggacaattgacatggaatgatctgatcagattatgcatcatggttggagccaacgcttccgacaggatggggatgggaacgacgtacctagctctgatggccacttttaaaatgagaccaatgtttgctgtaggactattattccgcagactaacatccagagaagtactccttctaacaattggattgagtctagtggcatctgtggagttaccaaattccttggaggagctgggggatggacttgcaatgggcattatgattttaaaattattgactgactttcaatcacatcagttgtgggctaccttgctgtccttgacatttatcaaaacaacattttccttgcactatgcatggaagacaatggccatggtactgtcaattgtatctctcttccccttatgcctgtctacgacttcccaaaaaacaacatggcttccggtgctattgggatctcttggatgcaaaccactaaccatgtttcttatagcagaaaacaaaatctggggaaggaaaagttggcccctcaatgaaggaatcatggctgttggaatagtcagcatcctactaagttcactcctcaaaaatgatgtgccgctagctgggccactaatagctggaggcatgctaatagcatgttatgttatatctggaagctcagccgacctatcactagagaaagcagctgaggtctcctgggaagaagaagcagaacactctggtgcctcacacaacatattagtggaggtccaagatgatggaaccatgaagataaaggatgaagagagagatgacacgctaaccattctccttaaagcaactctgctagcagtctcaggggtgtacccattatcaataccagcgaccctttttgtgtggtacttttggcagaaaaagaaacagagatctggagtgttatgggacacacctagccctccagaagtggaaagagcagttcttgatgatggtatctatagaattatgcagagaggactgttgggcaggtcccaagtaggggtaggagttttccaagaaaacgtgttccacacaatgtggcatgtcaccaggggagctgtactcatgtatcaagggaagagactggaaccgagctgggccagtgtaaaaaaagacctgatctcatatggaggaggttggaggcttcaaggatcctggaacacgggagaagaagtgcaggtgattgctgttgaaccaggaaaaaaccccaaaaatgtacaaacagcgccgggcacctttaagacctctgaaggtgaagttggagccattgccctagattttaaacccggcacatctggatctcccatcgtgaacagagaaggaaaaatagtaggtctttacggaaatggagtagtgacaacaagtggaacctacgtcagtgccatagctcaagccaaagcatcacaagaagggcctctaccagagattgaagacgaggtgtttaggaaaagaaacttaacaataatggacctacatccaggatcggggaaaacaagaagatatcttccagccatagtccgtgaggccataaaaaggaagctgcgcacattaattctggctcccacaagggttgtcgcttccgaaatggcagaggcgctcaaggggatgccaataaggtaccaaacaacagcagtgaagagtgaacacacaggaaaagagatagttgacctcatgtgtcacgccactttcactatgcgcctcctgtctcccgtgagagttcccaattacaacatgatta
| 2 | 7 | 0.4 | 0 | 364 |
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|
81 | 10,690 | 366 |
EU249493.1
|
Homo sapiens
|
dengue virus type I
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU249493.1 |Dengue virus 1 isolate DENV-1/VN/BID-V796/2006, complete genome|set:EU249493|dengue virus type I||2008-03-04T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Crawford,M., Engels,R., Freedman,E., Howarth,C., Jen,D., Larson,L., Ledlie,T., Lewis,B., Montgomery,P., Park,D., Pearson,M., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., MacCallum,I., Vu,H.T., Nguyen,Q.H., Nguyen,Q.T., Duong,P.H., Nguyen,H.T., Wills,B., Le,L.B., Tran,T.T., Tran,H.T., Lander,E., Galagan,J., Nusbaum,C., Simmons,C.P., Birren,B.|DENV-1/VN/BID-V796/2006|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10690|GenBank||||Viet Nam: south|Viet Nam||Homo sapiens||2006||PRJNA31235
|
aaacatctatcggcctactctgcgtgatggcttcaagcgtactgctatggatggccagtgtggagccccattggatagcggcctccatcatactggagttcttcctgatggtgctgcttattccagagccagacagacaacgcactccgcaggacaaccagctggcatatgtggtgataggtttgttattcatgatactgacagtagcagccaatgagatgggactgctggaaaccacaaagaaagacttagggattggccatgtggctgttgaaaatcaccaccatgccgcaatgctggacgtagacttacatccagcttcagcctggaccctctacgcagtggccacaacaattatcactcccatgatgaggcacacaatcgaaaacacaacggcaaacatttccctgacagccattgcaaaccaggcggctatattgatgggacttgacaaaggatggccaatatcgaagatggacataggagttccacttctcgccttggggtgctattcccaggtgaatccactgacgctgacagcggcggtgttgatgctagtggctcattacgccataattggacctggactgcaagcaaaagctactagagaagctcaaaaaaggacagcggccggaataatgaaaaatccaaccgttgatggaattgttgcaatagatttggatcccgtggtttatgatgcaaaatttgagaaacaactaggccaaataatgttgttgatactatgcacatcacaaatcctcttgatgcggactacatgggccttgtgcgaatccatcacactagccactggacctctgaccacgctttgggagggatctccaggaaaattttggaacaccacgatagcggtttccatggcaaacattttcagaggaagttatctagcaggagcaggtctggccttctcattaatgaaatctctaggaggaggtaggagaggcacgggagcccaaggggaaacactgggagagaaatggaaaagacagctgaaccaactgagcaagtcagaattcaacacttataaaaggagtgggatcatggaagtggacagatccgaagccaaagagggactgaaaagaggagaaacaaccaaacatgcagtgtcgagaggaacagctaaactgaggtggtttgtggagaggaatcttgtgaaaccagaagggaaagtcatagacctcggttgtggaagaggtggctggtcatactattgcgccgggctgaagaaagtcacagaagtgaagggatatacgaaaggaggacctggacatgaggagccaattccaatggcgacctatggatggaacctagtaaaactgcactccgggaaagacgtattctttataccacccgagaaatgtgacacccttttgtgtgatattggtgagtcctctccaaacccaactatagaggaaggaagaacgctacgcgtcctaaagatggtggaaccatggctcagaggaaaccaattttgcataaaaattctgaatccctacatgccaagtgtggtggaaactctggagcaaatgcaaagaaaacatggaggaatgctagtgcgaaatccactttcaagaaactctactcatgaaatgtattgggtttcatgtggaacaggaaacattgtgtcagcagtaaacatgacatccagaatgttgctaaatcgattcacaatggctcacaggaaaccaacgtatgaaagagacgtggacctaggcgccggaacaagacatgtggcagtggaacctgaggtagccaacctagatatcattggccagaggatagagaacataaaacatgaacataagtcaacatggcattatgatgaggacaatccatataaaacatgggcctaccatggatcatatgaggtcaagccatcaggatcagcctcatccatggtcaatggcgtggtgaaactgctcaccaaaccatgggatgtcatccccatggtcacacaaatagccatgactgacactacaccctttggacaacagagggtgttcaaagagaaagttgacacacgcacacca
| 4 | 7 | 0.7 | 0 | 366 |
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|
81 | 10,690 | 367 |
EU249493.1
|
Homo sapiens
|
dengue virus type I
|
Orthoflavivirus denguei
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
EU249493.1 |Dengue virus 1 isolate DENV-1/VN/BID-V796/2006, complete genome|set:EU249493|dengue virus type I||2008-03-04T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Crawford,M., Engels,R., Freedman,E., Howarth,C., Jen,D., Larson,L., Ledlie,T., Lewis,B., Montgomery,P., Park,D., Pearson,M., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., MacCallum,I., Vu,H.T., Nguyen,Q.H., Nguyen,Q.T., Duong,P.H., Nguyen,H.T., Wills,B., Le,L.B., Tran,T.T., Tran,H.T., Lander,E., Galagan,J., Nusbaum,C., Simmons,C.P., Birren,B.|DENV-1/VN/BID-V796/2006|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10690|GenBank||||Viet Nam: south|Viet Nam||Homo sapiens||2006||PRJNA31235
|
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| 5 | 7 | 0.9 | 0 | 367 |
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] |
|
82 | 5,892 | 370 |
MN689366.1
|
Solanum tuberosum
|
Potato leafroll virus
|
Potato leafroll virus
|
Solemoviridae
|
Polerovirus
|
ssRNA(+)
|
MN689366.1 |Potato leafroll virus isolate 18-1094, complete genome||Potato leafroll virus||2021-08-01T00:00:00Z|Agricultural Research Council, Biotechnology Platform|South Africa|Read,D.A., Muoma,J., Onamu,R., Khamala,A., Mosoti,R.D., Thompson,G.D.|18-1094|Potato leafroll virus|Polerovirus|complete|Solemoviridae|ssRNA(+)|5892|GenBank||||Kenya|Kenya||Solanum tuberosum||2018-05||
|
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| 2 | 4 | 0.8 | 0 | 370 |
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] |
|
83 | 2,825 | 371 |
MN770576.1
|
Homo sapiens
|
TTV-like mini virus
|
TTV-like mini virus
|
Anelloviridae
|
Betatorquevirus
|
ssDNA(-)
|
MN770576.1 |MAG: TTV-like mini virus isolate SAfiA-361-33, complete genome||TTV-like mini virus||2021-12-19T00:00:00Z|University Hospitals of Geneva, Laboratory of Virology|Switzerland|Cordey,S., Laubscher,F., Hartley,M.A., Junier,T., Keitel,K., Docquier,M., Guex,N., Iseli,C., Vieille,G., Le Mercier,P., Gleizes,A., Samaka,J., Mlaganile,T., Kagoro,F., Masimba,J., Said,Z., Temba,H., Elbanna,G.H., Tapparel,C., Zanella,M.C., Xenarios,I., Fellay,J., D'Acremont,V., Kaiser,L., Hartley,M.-A., Zanella,M.-C.|SAfiA-361-33|TTV-like mini virus|Betatorquevirus|complete|Anelloviridae|ssDNA(-)|2825|GenBank|||1|Tanzania|Tanzania||Homo sapiens||2015||
|
aatatttaaatattcataaaggaaaccacaaaattagaattgccgaccacaaaccgtcacttacttccctaaaatacataacttcctcaaacattcataaatattcatataataaattaataatcagcgtcacaaggggacgtacctcatacactataaaactaagtacacagacgaatggctgagtttatcacgccagacggagacgcgacaacttcgcggctgaatttgggcgggtgctgaaggtgagtgaaaccaccgaaatcaaggggcaattcgggctaattcagtctggcggacagggcaagattcttaaaaaataatttgttttacagatgagcgactacataaaaccaacaatttacaacaaaagaggattggaaaatgcatggattggaatagtattttcaacacacgatcaaatctgcggatgcaacgaacctatcaaccacctaaaccacttaattaacaacaaaaatggcctacttctacaacagaaaaaattactggagacgaaactactggaactaccgaaataaaagacgccggtttcgacgaaggagacctagaaagacttttcgaacaaagcgacgacccagacgggtaagaaaaaaattttttaaccgtaacttcaaaaaaaaactaaaaaaaattaaaatagaacaatggcagccatcttccataagaaaatgccatataagaggatttttactattatttgaagcgggacacggacgctttgcaaataactttacttattacaaagaatcttttactcctccaagaactccaggaggtggaggatggagtatacaacaactaggacttggaaacttatacactcaaaatgaatactttatgaactggtggactcattctaatagaggtttaaatatggttagatattacggatgtaatataaaactatatagacaaccagaaatagactatatattcacatattttacagaaaaacctcaaaatgcagaaaaattttggtatccatcctttcatccctttagactattactagacaaaaaaagaatcatagtacctagtttacaaactcaaccccacaaaagaaaattatacaaaagagtacatatcagaccaccaaaaatgttaaaaacagactggtattttcaacaaaacctatcaaactacccactaatatactttgcaacagtagcatgtagcttaaaccatatgtttattagttctaaagcagaaaacaataatgtttctgtaataaccctaaatacaagattttttatgaaaagtgcctttcaatacacatccccagactacggttaccaaccaaaagaatcagtatggatatatggcctacacaatggcacaatagaccttgctcaaacaccaaaatcacaagtaatatacttaggagacacacactatagagatccaggagaacaaataggaaacaaaaactgggacaactatgcaaaaacatcatgggggaacatattttaccatgaatattttggcttatacagaacagtatttctaggcccagatccaaaaaaatttttatccgatacttcaaaacctataggttcccaaggaattactaagtccgaaccactatgggaagaactaagatacaacccatataaagataaaggtgacggaaatttagcatattggaaatcagtttctgacgccactaataacaattgggaacctccaaagagccctaacttaataatatcaggatttcccttctggctaatgttatggggatgggaagaccacactcgtagactatcagaaatttcaaaccttgatgataattggatgctagtactaagatcaaaatactttaacaacaactacgcagccatagtaccactaagttggagctttgtaaatggaagagctccatataataatgatccagaagacatttctacaacagatcaaagaaactggtttccaaaatggaaatttcaaaaagaagcaatagacaatatattaatgtcaggcccaggtgttgtaaaagctgaatctgtacaaggtatacaggcctt
| 0 | 2 | 0.5 | 0 | 371 |
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] |
|
83 | 2,825 | 372 |
MN770576.1
|
Homo sapiens
|
TTV-like mini virus
|
TTV-like mini virus
|
Anelloviridae
|
Betatorquevirus
|
ssDNA(-)
|
MN770576.1 |MAG: TTV-like mini virus isolate SAfiA-361-33, complete genome||TTV-like mini virus||2021-12-19T00:00:00Z|University Hospitals of Geneva, Laboratory of Virology|Switzerland|Cordey,S., Laubscher,F., Hartley,M.A., Junier,T., Keitel,K., Docquier,M., Guex,N., Iseli,C., Vieille,G., Le Mercier,P., Gleizes,A., Samaka,J., Mlaganile,T., Kagoro,F., Masimba,J., Said,Z., Temba,H., Elbanna,G.H., Tapparel,C., Zanella,M.C., Xenarios,I., Fellay,J., D'Acremont,V., Kaiser,L., Hartley,M.-A., Zanella,M.-C.|SAfiA-361-33|TTV-like mini virus|Betatorquevirus|complete|Anelloviridae|ssDNA(-)|2825|GenBank|||1|Tanzania|Tanzania||Homo sapiens||2015||
|
gaaatttagcatattggaaatcagtttctgacgccactaataacaattgggaacctccaaagagccctaacttaataatatcaggatttcccttctggctaatgttatggggatgggaagaccacactcgtagactatcagaaatttcaaaccttgatgataattggatgctagtactaagatcaaaatactttaacaacaactacgcagccatagtaccactaagttggagctttgtaaatggaagagctccatataataatgatccagaagacatttctacaacagatcaaagaaactggtttccaaaatggaaatttcaaaaagaagcaatagacaatatattaatgtcaggcccaggtgttgtaaaagctgaatctgtacaaggtatacaggcctttatgaaatatgatttttcttttaagtggggaggcgagccagcaaacatggaaaacatctcagatccaaacagtcaacccatcacacctctgccccgtgaaatctttacaacaaatgaaatcattaatccaaacaccagcatccaagacctcatctacaaatgggaaactagacgtgacttacttacacaaacagcttacaaaagaatatcagaatgccaaactgatgacaaacctttgttcacagatggaagacaaacttcaacagacatcccacaagaaacacaaacacaaacaacgaaaacagccacgaaagaagaagaagagacattactcctccagctcaaccagctccagcaactcaaccagcaattacaacagcgattccagcaactaaaacaactaacacaagaataaactttactttaataaaaaaagcatacttattcgacccacctgtaaataaacatagattaataacgggtagggactgggaaacagaactagaaatatgtaagtggttaaaaagaccaatgagacgttttcacgatgaccacccaacttatccctggttaccccctgaacctcttgtaaatcaaccatatgtaaactttgacattgtatctgcttttaataaaggccagcattaattcacttaaggtgtctgtttctttaagtaaaaacctaactaaaccaacaccgcctcccaaatacgcaggcgcacaagggggctccgcccccttaaacccccagggggggaaacccccccttaccccccc
| 1 | 2 | 1 | 0 | 372 |
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|
84 | 7,434 | 373 |
JX275049.2
|
Homo sapiens
|
Poliovirus 2
|
Enterovirus C
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
JX275049.2 |Poliovirus 2 strain NIE0711538, complete genome|set:JX275049|Poliovirus 2||2013-02-22T00:00:00Z|Centers for Disease Control and Prevention, NCIRD/DVD/PPLB|USA|Burns,C.C., Shaw,J., Jorba,J., Bukbuk,D., Adu,F., Gumede,N., Pate,M.A., Abanida,E.A., Gasasira,A., Iber,J., Chen,Q., Vincent,A., Chenoweth,P., Henderson,E., Wannemuehler,K., Naeem,A., Umami,R.N., Nishimura,Y., Shimizu,H., Baba,M., Adeniji,A., Williams,A.J., Kilpatrick,D.R., Oberste,M.S., Wassilak,S.G., Tomori,O., Pallansch,M.A., Kew,O., Asif,N., Kilpatrick,D., Wassilak,S., Pallansch,M.|KTS07-03|Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7434|GenBank|PV2||1|Nigeria|Nigeria||Homo sapiens||2007||
|
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| 0 | 5 | 0.2 | 0 | 373 |
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|
84 | 7,434 | 374 |
JX275049.2
|
Homo sapiens
|
Poliovirus 2
|
Enterovirus C
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
JX275049.2 |Poliovirus 2 strain NIE0711538, complete genome|set:JX275049|Poliovirus 2||2013-02-22T00:00:00Z|Centers for Disease Control and Prevention, NCIRD/DVD/PPLB|USA|Burns,C.C., Shaw,J., Jorba,J., Bukbuk,D., Adu,F., Gumede,N., Pate,M.A., Abanida,E.A., Gasasira,A., Iber,J., Chen,Q., Vincent,A., Chenoweth,P., Henderson,E., Wannemuehler,K., Naeem,A., Umami,R.N., Nishimura,Y., Shimizu,H., Baba,M., Adeniji,A., Williams,A.J., Kilpatrick,D.R., Oberste,M.S., Wassilak,S.G., Tomori,O., Pallansch,M.A., Kew,O., Asif,N., Kilpatrick,D., Wassilak,S., Pallansch,M.|KTS07-03|Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7434|GenBank|PV2||1|Nigeria|Nigeria||Homo sapiens||2007||
|
gcgccactagactttgccactgaatcttccactgaaatacccattacactgaccattgctcccatgtgctgcgaattcaatggtttacgcaacatcaccgtgccaagaacccaagggttaccagtcctgaacactccagggagtaaccagtacttgaccgcagacaattaccagtccccgtgtgcgatacctgagtttgatgtcactccacccataaacataccaggggaggtgcacaacatgatggaattggcggaaatagacaccatgatacccctcaacttgacaagtcaacgcaagaacacaatggacatgtatagagtcgagttgagcgacacggctcactctgacacaccgatcttgtgtctctcattgtcccccgcttcagaccccagattggcacacaccatgttgggtgagatattaaattactacacacactgggcagggtccttgaaatttacctttctcttttgcggctcaatgatggccaccggaaagttattggtttcttacgcaccacctggagcagaggcccccaagagtcgcaaagaagcaatgcttgggacacatgtgatatgggacattggattgcagtcttcatgcactatggtggtaccttggatcagtaataccacatacagacaaaccatcaacgatagtttcacagaaggtggctacattagcatgttctatcaaactagggttgttgtcccgttgtccacacccagaaagatggacatcctgggttttgtgtcagcttgcaatgacttcagtgtgcgactactgcgagatactacacacattagtcaagaggctatgccacaaggaattggtgacatgattgagggggccgttgaagggattactaaaaatgcattggttcccctgacttccaccaatagcctgcctgacacaaagccgagcggtccagcccactcaaaggagatacctgcattgacagccgtggaaacaggggccaccaatccgttggtgccttcggacaccgtgcaaacgcgccatgtcatccagagacgaacgcgatcagagtccacggttgagtcattctttgcaagaggggcttgcgtggccatcattgaggtggataatgatgcaccgacaaagcgcgccagcagattgttttcggtttggaaaataacttacaaagatactgttcaactgagacgcaaactggaattcttcacatattcgagatttgacatggagttcacttttgtggtcacctcaaactacactgatgcaaataacggacatgcattgaaccaagtttatcagataatgtatataccacccggagcacctatccctggtaaatgggatgactatacgtggcagacgtcctctaatccgtcggtgttttacacctatggggcgcccccagcaagaatatcagtaccctacgtgggaattgctaatgcgtattcccacttttatgatgggtttgcaaaagtaccactagcgggtcaggcctcaactgaaggcgattcgttgtacggtgctgcctcactgaatgattttggatcactagctgttcgcgtggtaaatgatcacaaccccacgcggctcacttccaagatcagagtgtacatgaagccaaagcatgtcagagtctggtgcccacgacctccacgagcagttccatacttcggaccaggtgttgattacaaagatgggctcaccccactaccagaaaagggattaacgacttatggatttggacaccaaaacaaagctgtgtacacagctggctacaaaatttgcaattaccacctagctacacaagaagacttgcaaaatgccgtgagtgtcatgtggaacagagacctcttagtggctgaatcaagagctcaaggcactgattcgattgccaggtgcaactgcaacacaggggtatactattgtgaatctagaagaaagtactatccagtcacattcattggcccaacctttcaatacatggaagcaaatgagtactaccctgccagatatcaatcccacatgctaatcggccgtggatttgcctcacc
| 1 | 5 | 0.4 | 0 | 374 |
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] |
|
84 | 7,434 | 375 |
JX275049.2
|
Homo sapiens
|
Poliovirus 2
|
Enterovirus C
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
JX275049.2 |Poliovirus 2 strain NIE0711538, complete genome|set:JX275049|Poliovirus 2||2013-02-22T00:00:00Z|Centers for Disease Control and Prevention, NCIRD/DVD/PPLB|USA|Burns,C.C., Shaw,J., Jorba,J., Bukbuk,D., Adu,F., Gumede,N., Pate,M.A., Abanida,E.A., Gasasira,A., Iber,J., Chen,Q., Vincent,A., Chenoweth,P., Henderson,E., Wannemuehler,K., Naeem,A., Umami,R.N., Nishimura,Y., Shimizu,H., Baba,M., Adeniji,A., Williams,A.J., Kilpatrick,D.R., Oberste,M.S., Wassilak,S.G., Tomori,O., Pallansch,M.A., Kew,O., Asif,N., Kilpatrick,D., Wassilak,S., Pallansch,M.|KTS07-03|Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7434|GenBank|PV2||1|Nigeria|Nigeria||Homo sapiens||2007||
|
cacgagcagttccatacttcggaccaggtgttgattacaaagatgggctcaccccactaccagaaaagggattaacgacttatggatttggacaccaaaacaaagctgtgtacacagctggctacaaaatttgcaattaccacctagctacacaagaagacttgcaaaatgccgtgagtgtcatgtggaacagagacctcttagtggctgaatcaagagctcaaggcactgattcgattgccaggtgcaactgcaacacaggggtatactattgtgaatctagaagaaagtactatccagtcacattcattggcccaacctttcaatacatggaagcaaatgagtactaccctgccagatatcaatcccacatgctaatcggccgtggatttgcctcaccaggagattgtggagggattctcagatgtcaacacggagtgataggtattgtcacagccggtggtgaaggcttggttgcattctcagacattagggacctttatgcctatgaggaggaagccatggaacaaggcatttccaattacatcgaatctctcggtgctgcttttgggagcgggtttacacagcaaattggagacaaaatttcagagctcaccagtatggtgaccagtacaatcactgaaaaattgttgaaaaacctcataaagataatttcatctttggtcatcataaccagaaattacgaagacacgactacagtgcttgccacccttgcacttcttggttgcgatgtgtccccgtggcagtggcttaagaagaaggcctgtgacatattggaaattccgtatgttatgcgccagggtgatagttggttaaagaaattcactgaggcatgcaatgctgccaaggggttagaatgggtctcaaacaaaatttccaagttcattgactggttaaaggagaaaatcattcctcaagccagagacaagttagaatttgtcacaaaactgaagcaattggaaatgttagaaaatcagattgcaacaatccatcaatcatgccctagtcaagaacaccaggagatcctatttaacaatgtgagatggttgtccatacagtcaaagaggtttgccccactttatgctatggaggccaaaaggatccagaaactagaacataccatcaacaactacatacagtttaagagcaaacaccgtattgaaccagtatgtttgttggtacacggcagccctgggacaggcaaatcagtggctaccaatctaattgctagagccatagcagagaaggaaaacacatccacttactcactaccaccggacccttcccactttgatggttataaacagcagggggttgtaataatggatgatttaaatcagaacccagatggggccgacatgaagttgttctgccaaatggtctccaccgtggaatttattccaccaatggcatcattggaagaaaaaggcattctgtttacgtcaaattatgttctggcatctactaactctagccggatcactccacccaccgtagcccatagtgacgcccttgccagacgctttgcatttgacatggacattcaagtaatgggcgagtattctagggatggcaaattgaacatggcaatggcaactgaaatgtgtaaaaactgtcatcaaccagcaaattttaaaagatgctgtccgttggtgtgtggaaaagccatccaactaatggacaaatcgtccagggttaggtacagtattgaccagatcactactatgatcatcaatgagaggaacagaagatccaatattggcaattgcatggaagcactattccagggtcctctacaatacaaagatctaaaaatagacatcaaaagcacacccccacctgaatgtatcaatgatctgctacaatcagtggattcccaagaagtaagggattattgtgagaaaaagggatggatagtcaacatcactagtcaagtccaaaccgagaggaacataaacagagcaatgaccatcctccaagcagtgaccacatttgcagcagttgctggtgtggtgtacgtgatgtac
| 2 | 5 | 0.6 | 0 | 375 |
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|
84 | 7,434 | 376 |
JX275049.2
|
Homo sapiens
|
Poliovirus 2
|
Enterovirus C
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
JX275049.2 |Poliovirus 2 strain NIE0711538, complete genome|set:JX275049|Poliovirus 2||2013-02-22T00:00:00Z|Centers for Disease Control and Prevention, NCIRD/DVD/PPLB|USA|Burns,C.C., Shaw,J., Jorba,J., Bukbuk,D., Adu,F., Gumede,N., Pate,M.A., Abanida,E.A., Gasasira,A., Iber,J., Chen,Q., Vincent,A., Chenoweth,P., Henderson,E., Wannemuehler,K., Naeem,A., Umami,R.N., Nishimura,Y., Shimizu,H., Baba,M., Adeniji,A., Williams,A.J., Kilpatrick,D.R., Oberste,M.S., Wassilak,S.G., Tomori,O., Pallansch,M.A., Kew,O., Asif,N., Kilpatrick,D., Wassilak,S., Pallansch,M.|KTS07-03|Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7434|GenBank|PV2||1|Nigeria|Nigeria||Homo sapiens||2007||
|
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| 3 | 5 | 0.8 | 0 | 376 |
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|
85 | 15,192 | 379 |
KY290560.1
|
Phasianinae
|
Avian orthoavulavirus 1
|
Orthoavulavirus javaense
|
oronasopharynx
|
Paramyxoviridae
|
Orthoavulavirus
|
ssRNA(-)
|
KY290560.1 |Avian orthoavulavirus 1 isolate peacock/Pakistan/Lahore/AW-pck/2015, complete genome|set:KY290560|Avian orthoavulavirus 1||2017-11-01T00:00:00Z|University of Veterinary and Animal Sciences, Institute of Biochemistry and Biotechnology/Quality Operations Lab|Pakistan|Wajid,A., Basharat,A., Wasim,M., Rehmani,S.F.|peacock/Pakistan/Lahore/AW-pck/2015|Orthoavulavirus javaense|Orthoavulavirus|complete|Paramyxoviridae|ssRNA(-)|15192|GenBank||||Pakistan|Pakistan||Phasianinae|oronasopharynx|2015-04-21||
|
tggactcatccaggacaatcgggctgtactttgactctgccctcccttccagcagcctgctagcattcccgattgttctacaagacacaggagacgggaagaagcaaatcaccccacaatacaggatccagcgtcttgactcgtggacagacagcagggaagactcggtattcatcaccacctacggattcatctttcaaattgggaatgaggaaatcacagccggtgtgatcaatgacaatcccaagcatgagctactctcttctgcaatgctctgcttgggaagtgtcccgaatgacggagatcttgttgagctggcaagagcctgcctcaccatggtgataacttgcaagaagagtgcaactaatactgagagaatagtcttctcagtagtgcaggcacctcgggtgctgcaaagctgtatggttgtggcgaataggtactcatcagtgaatgcggtgaagcatgtgaaagcaccagaaaagatccctgggggcggaaccctagagtataaagtaaattttgtctctttgactgtggtgccgagaagggatgtctacaggatcccaactgcagtattaaaagtatctggttcaagcctatacaatcttgcgctcaatgtcactatagatgtggatgtggatccgaaaagcccattggtcaagtccctttctaagtctgatagcggatactatgcgaatctttttttgcatatcgggcttatgtccactgtagacaagaaaggaaagaaagtgacgtttgacaagatagagggaaaaataagaagactcaatctatctgtcgggctcagtgacgtgctcggaccctctgtgcttgtgaaggcgagaggtgcacggaccaagctactcgcccccttcttctctagcagtgggacagcctgctatcctatagcaaatgcctctcctcaggttgccaagatactctggagccaaaccgcgcacctgcggagtgtgaaagtcatcattcaggccggcacccagcgtgctgttgcagtgaccgctgatcacgaggtaacctccactagaatagagaagaagcacgctattgcaaaatacaatcctttcaagaagtaagttgcttctttaaagctgcgattcacctgttttcttgaatcaccatgataccagataatgattcatctcgactgcttatagttagctcacctgtctagcaaattagaaaaaacacgggtagaagagtctggatcccaactagtacattctaggcgcaacatgggctccaaaccttctaccaggatcccggtacccctgatgttgatcactcggatcatgctgatattaagctatatctgtctgacaagctctcttgacggcaggcctcttgcagctgcagggattgtagtaacaggagacaaggcagtcaatgtatacacctcatctcagacagggtcaatcatagtcaagttgctcccgaatatgcctaaggataaagaggcgtgtgcaaaagccccattagaggcatacaacagaacactgactaccttgctcactccccttggcgattccatccgtaagatccaagggtcggtggccacgtccggaggaaggagacagaaacgctttataggtgccgttattggcagtgtagctctcggggttgcgacagcggcacagataacagcagctgcggccttaatacaagccaaccaaaatgccgccaacatcctccggcttaaagagagcattgctgcaaccaatgaagctgtgcacgaagttaccaatggattatcacaactatcagtggcagttggaaagatgcagcaattcgtcaatgaccagtttaataatacggcgcgagaattggactgtataaagattacacaacaagttggtgtagaactcaacctatacctaactgagttgactacagtattcgggccacagatcacttcccctgccttaactcagctgactatacaggcactctacaatctagccggcggcaatatggattacttgttaactaagttaggtgtagggaacaatcaactcagctcattaattagt
| 2 | 10 | 0.3 | 0 | 379 |
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] |
85 | 15,192 | 381 |
KY290560.1
|
Phasianinae
|
Avian orthoavulavirus 1
|
Orthoavulavirus javaense
|
oronasopharynx
|
Paramyxoviridae
|
Orthoavulavirus
|
ssRNA(-)
|
KY290560.1 |Avian orthoavulavirus 1 isolate peacock/Pakistan/Lahore/AW-pck/2015, complete genome|set:KY290560|Avian orthoavulavirus 1||2017-11-01T00:00:00Z|University of Veterinary and Animal Sciences, Institute of Biochemistry and Biotechnology/Quality Operations Lab|Pakistan|Wajid,A., Basharat,A., Wasim,M., Rehmani,S.F.|peacock/Pakistan/Lahore/AW-pck/2015|Orthoavulavirus javaense|Orthoavulavirus|complete|Paramyxoviridae|ssRNA(-)|15192|GenBank||||Pakistan|Pakistan||Phasianinae|oronasopharynx|2015-04-21||
|
tatcggtagcgatctccaagacggaggataaggttacatctttactcagttcaagtcaagatgtgatggataggatatataagcaggtggctcttgaatctccgctggcgctactaaacactgagtctataattatgaatgctataacctctctttcctatcaaatcaacggggccgcgaataatagcgggtgtggggcgcctgttcatgacccagattatataggggggataggcaaagaactcatagtagacgacacgagtgatgtcacatcattttatccttctgcctatcaagagcacttgaatttcatcccagcacctactacaggatccggttgcactcggataccctcattcgacatgagcaccactcactactgttacactcacaatgtgatattatctggctgcagagatcactcacactcacatcaatacttagcacttggtgtgcttcggacatctgcaacggggaaggtattcttctctactctgcgttctatcaatttagatgacacccaaaaccggaagtcctgcagtgtgagtgcaacccctttaggctgtgatatactgtgctctaaggtcacagagactgaggaagaggattacaagtcagttacccccacatcaatggtgcacggaaggttagggtttgacggtcaataccatgagaaggacttagacaccacagccttattcaaggattgggtggcaaattacccaggagtgggaggtggatcttttgttgacgagcgtgtatggttcccagtttatggagggctcaaacccaattcacccagtgacactgcgcaagaagggaaatatgtaatatacaagcgctataatgatacatgccccgataaacaagattaccaaattcggatggctaagtcttcatataaacctgggcgatttggtggaaagcgcgtacaacaagccatcttatctatcaaagtgtcaacatccttaggtgaggacccaatgctgactattccacctaatacaattacactcatgggggccgaaggcagaattctcacggtagggacatctcacttcttgtaccaacgagggtcttcatatttctcccccgctttattataccccatgacaatatccaacaaaacagctactcttcatagcccttatacatttaatgctttcactcggccagggagtgtcccttgccaggcatcagcaagatgccccaactcatgcatcactggagtctatactgatccatatcccttaatctttcataggaatcataccctacgaggggttttcgggacgatgcttgatgatgggcaagcaagacttaaccctgtatctgcagtatttgacgacatatcccgcagtcgtgtaacccgggtgagttcaagcagcaccaaggcagcatacacaacatcgacatgttttaaagttgtcaagaccaataaaacttattgtcttagtatcgcagaaatatccaataccctattcggggaatttaggattgttcctttactagttgagatcctcaaggataatagggcttaagaagctaagcttggtcgaccgagtcagccacaggacagtcggaaggatgacaccgcaccaatcctctcccgcgatgcacagagacaggccgagtattaacataagccaggatcccatgctgccaggcagccacaaatcgacaacgctcacatgattaatttgagtcctgtctacagtcactttattaagaaaaaataacaaaagcagtgagatacaagagaaaacaaccctcagaagaaagcacgggtaggacatggcgggctccggtcccgaaagggcagagcaccggattatcctaccagagtcacatctatcttctccattggtcaagcacaaattgctctattactggaaattgactgggctgccgcttcctgatgaatgcgactttgatcatctcattataagcaggcaatggaaaaaaatactggaatcggccactcctgacacggaaagaatgatcaaactcggacgggcagtgcaccagaccctcaaccacaattccaa
| 4 | 10 | 0.5 | 0 | 381 |
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] |
85 | 15,192 | 382 |
KY290560.1
|
Phasianinae
|
Avian orthoavulavirus 1
|
Orthoavulavirus javaense
|
oronasopharynx
|
Paramyxoviridae
|
Orthoavulavirus
|
ssRNA(-)
|
KY290560.1 |Avian orthoavulavirus 1 isolate peacock/Pakistan/Lahore/AW-pck/2015, complete genome|set:KY290560|Avian orthoavulavirus 1||2017-11-01T00:00:00Z|University of Veterinary and Animal Sciences, Institute of Biochemistry and Biotechnology/Quality Operations Lab|Pakistan|Wajid,A., Basharat,A., Wasim,M., Rehmani,S.F.|peacock/Pakistan/Lahore/AW-pck/2015|Orthoavulavirus javaense|Orthoavulavirus|complete|Paramyxoviridae|ssRNA(-)|15192|GenBank||||Pakistan|Pakistan||Phasianinae|oronasopharynx|2015-04-21||
|
aggatcccatgctgccaggcagccacaaatcgacaacgctcacatgattaatttgagtcctgtctacagtcactttattaagaaaaaataacaaaagcagtgagatacaagagaaaacaaccctcagaagaaagcacgggtaggacatggcgggctccggtcccgaaagggcagagcaccggattatcctaccagagtcacatctatcttctccattggtcaagcacaaattgctctattactggaaattgactgggctgccgcttcctgatgaatgcgactttgatcatctcattataagcaggcaatggaaaaaaatactggaatcggccactcctgacacggaaagaatgatcaaactcggacgggcagtgcaccagaccctcaaccacaattccaagataaccggagtgctccatcccaggtgtttggaagaactggctagtattgaaatccctgactcaaccaacaaatttcggaagattgagaagaagatccaaattcataatacaaggtatggagaattgttcgcaaaactgtgcacgcatgttgaaaagaaattgctaggatcatcctggtctaataatgtcccacgatcagaggaattcagcagcatccgtatggatccggcattctggtttcactcaaagtggtccaaagccaagttcgcatggctccatataaaacaggtccaaaggcatctgattgtagcagcaagaacaaggtctgcagtcaacaagttagtaacattaactcataaggtaggccacgtctttgttacccctgagcttgtcattgtgacacgtacagatgataacaagttcacatgcctcacccaggaacttgtattgatgtatgcagatatgatggaaggcagggacatggtcaacataatatcttctacggcggcacatcttaggaacgtatccgagaaaattaatgatatcctgcggttagtagatgccctggcaaaggatttgggtaatcaagtccatgatgttgtagcattaatggagggattcgcatacggtgccgttcagctgcttgagccttcaggtacatttgcaggagatttttttgcattcaacctacaggagctcaaggacactctaatcgaacttctcccaaacaatatagcggaatcagtaactcacgcaatcgccactgtgttctctggcttagaacagaatcaagcagcagagatgctatgcttgctgcgtttgtggggtcatccactgcttgagtcccgtagtgcagcaagagcggtcaggagccagatgtgcgcaccaaagatggtagacttcgatatgatcctccaggtattatccttctttaaaggaacaataatcaatggatatagaaagaagaactcaggtgtgtggccacgtgtcaaagtagatacaatatacgggaatgtcattgggcagctacatgctgattcagcagagatctcacatgaggtcatgttaagggagtacaagagtttatctgcccttgaatttgagccatgtatagagtatgaccctgttaccaatctaagcatgttcctaaaagataaggcaatcgcacatccgaatgataactggcttgcctcgtttaggcggaaccttctctctgaggaccagaagaaacagataaaggaggcgacctcaactaaccgcctcctgatagagtttttagagtcaaatgattttgatccatacaaagagatggaatacctgacaacccttgagtatctaagagatgataatgtggcagtatcgtactcactcaaagagaaggaggtgaaagtgaatgggcgaattttcgctaagctaacaaagaaactaaggaactgccaggtaatggcagaaggaattctagctgaccagattgcacctttcttccaggggaatggtgtcatccaagatagcatatccttgactaagagtatgttagcaatgagtcaactgtcctttaacagcaataagaaacgtatcaccgactgcaaggaaagggtttcctcaaaccgcaatcatgatccaaaaagcaagaatcgtcgaagggtt
| 5 | 10 | 0.6 | 0 | 382 |
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] |
85 | 15,192 | 383 |
KY290560.1
|
Phasianinae
|
Avian orthoavulavirus 1
|
Orthoavulavirus javaense
|
oronasopharynx
|
Paramyxoviridae
|
Orthoavulavirus
|
ssRNA(-)
|
KY290560.1 |Avian orthoavulavirus 1 isolate peacock/Pakistan/Lahore/AW-pck/2015, complete genome|set:KY290560|Avian orthoavulavirus 1||2017-11-01T00:00:00Z|University of Veterinary and Animal Sciences, Institute of Biochemistry and Biotechnology/Quality Operations Lab|Pakistan|Wajid,A., Basharat,A., Wasim,M., Rehmani,S.F.|peacock/Pakistan/Lahore/AW-pck/2015|Orthoavulavirus javaense|Orthoavulavirus|complete|Paramyxoviridae|ssRNA(-)|15192|GenBank||||Pakistan|Pakistan||Phasianinae|oronasopharynx|2015-04-21||
|
ctcaactaaccgcctcctgatagagtttttagagtcaaatgattttgatccatacaaagagatggaatacctgacaacccttgagtatctaagagatgataatgtggcagtatcgtactcactcaaagagaaggaggtgaaagtgaatgggcgaattttcgctaagctaacaaagaaactaaggaactgccaggtaatggcagaaggaattctagctgaccagattgcacctttcttccaggggaatggtgtcatccaagatagcatatccttgactaagagtatgttagcaatgagtcaactgtcctttaacagcaataagaaacgtatcaccgactgcaaggaaagggtttcctcaaaccgcaatcatgatccaaaaagcaagaatcgtcgaagggttgccacttttatcacgactgacctgcaaaagtattgtcttaactggagatatcagacagttaaattattcgcccatgccatcaatcagctgatgggcctaccccactttttcgagtggattcatcttagattaatggacactacgatgtttgtaggggatcctttcaatcctccgagtgacccgactgattgtgacttatcaagagtcccaaatgatgacatatatattgtcagtgctagagggggcattgagggactctgccagaagctatggacaatgatctcaattgctgcaatccaacttgctgcggcaagagctcattgtcgagttgcctgcatggtacaaggtgacaatcaagtaatagctgtaacgagagaggtaagatctgacgactccccggaaatggtgttgacacagttacatcaagctagtgataatttcttcaaggaattgatccacgtcaatcatctgatcggccataacctgaaggatcgtgaaaccatcagatcagacacattctttatatacagcaagcgaatattcaaagatggagcaatactcagtcaggttctcaagaactcatcaaaattggtgctaatatcaggcgaccttagcgaaaacactgtaatgtcctgtgccaatattgcatccactgtagcaagactttgtgagaacgggcttcctaaggatttctgctactatttgaactacctaatgagttgcgtgcagacatactttgattcagaattttctattacccacagcactcaaccagattccaaccaatcctggatcgaggatatctctttcgtgcactcatacgtgttaactcctgcccagctggggggattgagcaaccttcaatactcaaggctctacacaaggaatattggtgatccagggactactgctttcgcagaggtcaagcgattagaagcagtagggttgctgagtcctagcattatgactaacatcttaaccagaccacctggcaacggagactgggccagcctgtgcaacgatccgtactccttcaattttgagactgttgcaagccccaacattgtcctcaagaaacatacacagaaagtcttattcgagacttgctcaaaccccttattatctggggtacacacagaggacaatgaggcggaagagaaagcattggctgaattcttactcaaccaagaagtgattcacccacgtgtcgcacatgctatcatggaagcaagctctgtaggtagaagaaagcaaattcaagggctcgttgacacaacgaacactgtgattaagattgcactgactaggaggcccctcggtattaaaaggctgatgcggataatcaattactcaagcatgcatgcaatgttattcagagatgatattttcttatctaatagatccaaccacccattggtttcttccactatgtgctcgctgacgcttgcagattatgcccggaacagaagctggtcacccctgacagggggcaggaaaatactgggtgtatctaaccccgataccatagaacttgtggagggagagattctcagtgtcagtggagggtgcacaaagtgtgacagtggagatgagcagtttacttggttccatcttccaagcaatatagagctgactgacgacaccagca
| 6 | 10 | 0.7 | 0 | 383 |
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] |
86 | 10,678 | 387 |
FJ461309.1
|
Homo sapiens
|
Dengue virus type 2
|
Orthoflavivirus denguei
|
blood
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
FJ461309.1 |Dengue virus 2 isolate DENV-2/VN/BID-V1845/2008, complete genome|set:FJ461309|Dengue virus type 2||2009-01-26T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Engels,R., Freedman,E., Gellesch,M., Howarth,C., Jen,D., Larson,L., Lewis,B., Montgomery,P., Park,D., Pearson,M., Richards,J., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., McCallum,I., Vu,H.T., Nguyen,Q.H., Nguyen,Q.T., Duong,P.H., Tran,H.T., Nguyen,L.T.M., Nguyen,L.P.H., Lander,E., Galagan,J., Nusbaum,C., Simmons,C.P., Birren,B.|DENV-2/VN/BID-V1845/2008|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10678|GenBank||||Viet Nam: South|Viet Nam||Homo sapiens|blood|2008||PRJNA31235
|
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| 1 | 7 | 0.3 | 0 | 387 |
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] |
86 | 10,678 | 389 |
FJ461309.1
|
Homo sapiens
|
Dengue virus type 2
|
Orthoflavivirus denguei
|
blood
|
Flaviviridae
|
Orthoflavivirus
|
ssRNA(+)
|
FJ461309.1 |Dengue virus 2 isolate DENV-2/VN/BID-V1845/2008, complete genome|set:FJ461309|Dengue virus type 2||2009-01-26T00:00:00Z|Broad Institute of MIT and Harvard|USA|Henn,M.R., Young,S., Kodira,C., Koehrsen,M., Jaffe,D., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Borenstein,D., Engels,R., Freedman,E., Gellesch,M., Howarth,C., Jen,D., Larson,L., Lewis,B., Montgomery,P., Park,D., Pearson,M., Richards,J., Roberts,A., Sisk,P., Stolte,C., White,J., Zeng,Q., Yandava,C., Oleary,S., Alvarado,L., Alvarez,P., Brockman,W., Butler,J., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., McCallum,I., Vu,H.T., Nguyen,Q.H., Nguyen,Q.T., Duong,P.H., Tran,H.T., Nguyen,L.T.M., Nguyen,L.P.H., Lander,E., Galagan,J., Nusbaum,C., Simmons,C.P., Birren,B.|DENV-2/VN/BID-V1845/2008|Orthoflavivirus denguei|Orthoflavivirus|complete|Flaviviridae|ssRNA(+)|10678|GenBank||||Viet Nam: South|Viet Nam||Homo sapiens|blood|2008||PRJNA31235
|
tttatggcaatggtgttgtcacaaggagtggagcatatgtgagtgctatagcccaaactgaaaaaagcattgaagacaaccccgagatcgaagatgacattttccgaaagagaagactgaccatcatggacctccacccaggagcgggaaagacgaaaagataccttccagccatagtcagagaagccataaaacggggtttgagaacattaatcttggcccccactagagttgtggcagctgaaatggaggaagctctcagaggacttccaataagataccaaaccccagccatcagagctgagcacactgggcgggaaattgtggatctaatgtgtcatgccacatttaccatgaggctgctatcaccagttagagtgccaaactataacttgattatcatggacgaagcccattttacagatccagcaagtatagcagctagaggatacatctcaacccgagtggaaatgggtgaggcagctgggattttcatgacagccactcccccgggaagtagagatccatttcctcagagcaatgcaccaatcatagatgaagaaagagaaatccctgaacgttcatggaattctggacatgagtgggtcacggattttaaagggaagactgtttggttcgttccaagcataaaagcaggaaatgatatagcagcttgcctgagaaaaaatggaaaaaaagtaatacaacttagtaggaagacttttgattctgagtatgtcaagactagaaccaatgattgggatttcgtggttacaactgacatttcagaaatgggtgccaatttcaaagctgagagggttatagaccccagacgctgcatgaaaccagtcatactaacagatggtgaggagcgggtgattctggcaggacctatgccagtgacccattctagtgcagcacaaagaagagggagaataggaagaaatccaaaaaatgagaatgaccagtacatatacatgggagaacctctggaaaatgatgaagactgtgcacactggaaagaagccaaaatgctcttagataacattaacacaccagaaggaatcattcctagtatgttcgaaccagagcgtgaaaaagtggatgccattgatggcgaataccgtttgagaggagaagcaaggaaaacatttgtggacttaatgaggagaggagacttaccagtctggttggcttacaaagtggcagctgaaggcatcaactatgcagacagaaggtggtgttttgatggaattaagaacaaccaaatcctggaagaaaatgtggaagttgaaatctggacaaaagaaggggaaaggaagaaattgaaacccagatggttggatgctaggatctactctgacccactggcgctaaaagagttcaaagaatttgcagccggaagaaagtctctgaccctgaacctaatcacagaaatgggtaggcttccaacattcatgactcagaagacaagagacgcactggacaacctagcagtgctgcacacggctgaagcaggtggaagggcgtacaatcatgctctcagtgaactgccggagaccctagagacactgcttttactgacacttctggctacagtcacaggagggatctttttattcttgatgagcgggaggggcatagggaagatgaccctgggaatgtgctgcataatcacggctagcatccttctatggtacgcacaaatacagccacactggatagcagcttcaataatactggagttttttctcatagttttgcttattccagaaccagaaaaacagagaacaccccaagacaaccaattgacctacgttgtcatagccatcctcacagtggtggccgcaaccatggcaaacgagatgggtttcctagaaaaaacgaagaaggatcttggattaggaagcattgcaacccagcaacccgagagcaacatcctggacatagacctacgtcccgcatcagcttggacgctgtatgccgtggctacaacatttgttacaccaatgctgagacatagcattgagaattcctcagtgaatgta
| 3 | 7 | 0.6 | 0 | 389 |
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] |
88 | 5,110 | 392 |
AB081022.1
|
JC polyomavirus
|
Betapolyomavirus secuhominis
|
Polyomaviridae
|
Betapolyomavirus
|
dsDNA
|
AB081022.1 |JC virus DNA, complete genome, isolate:ME-8|set:AB081022|JC polyomavirus||2002-11-06T00:00:00Z|Yoshiaki Yogo, The Institute of Medical Science, The University of Tokyo, Laboratory of Viral Infection, Department of Microbiology and Immunology; 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639|Japan|Zheng,H., Sugimoto,C., Hasegawa,M., Kobayashi,N., Kanayama,A., Rodas,A., Mejia,M., Nakamichi,J., Guo,J., Kitamura,T., Yogo,Y.|ME-8|Betapolyomavirus secuhominis|Betapolyomavirus|complete|Polyomaviridae|dsDNA|5110|GenBank|||1|Mexico|Mexico||||||
|
gcctcggcctcctgtatatataaaaaaaagggaaggtagggaggagctggctggctgccagccaagcatgagctcatacctagggagccaaccagctgacagccagagggagccctggctgcatgccactggcagttatagtgaaaccactcccatagtccttaatcacaagtaaacaaagcacaaggggaagtggaaagcagccaagggaacatgttttgcgagccagagctgttttggcttgtcaccagctggccatggttcttcgccagctgtcacgtaaggcttctgtgaaagttagtaaaacctggagtggaactaaaaaaagagctcaaaggattttaatttttttgttagaatttttgctggatttttgcacaggtgaagacagtgtagacgggaaaaaaagacagaaacacagtggtttgactcagcagacatacagtgctttgcctgaaccaaaagctacataggtaagtaatgtttttttttgtgttttcaggttcatgggtgccgcacttgcacttttgggggacctagttgctactgtttctgaggctgctgctgccacaggattttcagtagctgaaattgctgctggagaggctgctgctactatagaagttgaaattgcatcccttgctactgtagaggggattacaagtacctctgaggctatagctgcaataggccttactcctgaaacatatgctgtaattactggagctccgggggctgtagctgggtttgctgcattggttcaaactgtaactggtggtagtgctattgctcagttgggatatagattttttgctgactgggatcataaagtttcaacagttgggctttttcagcagccagctatggctttacagttatttaatccagaagactactatgatattttatttcctggagtgaatgcctttgttaacaatattcactatttagatcctagacattggggcccttctttgttctccacaatctcccaggctttttggaatcttgttagagatgatttgccatctttaacatctcaggaaattcaaagaagaacccaaaaactatttgttgaaactttagcaaggtttttggaagaaactacttgggcaatagtcaattcaccagttaacttatataattatatttcagactattattctagattgtctccagttaggccctctatggtaaggcaggttgcccaaagggagggaacctatatttcctttggccactcatacacccaaagtatagataatgcagacagcattcaagaagttacccaaaggctagatttaaaaaacccaaatgtgcaatctggtgaatttatagagaaaagttttgcaccaggaggtgcaaatcaaagatctgctcctcaatggatgttgcctttacttttagggttgtacgggactgtaacacctgctcttgaagcatatgaagatggccccaacaaaaagaaaaggagaaaggaaggaccccgtgcaagttccaaaacttcttataagaggaggagtagaagttctagaagttaaaactggggttgactcaattacagaggtagaatgctttttaactccagaaatgggtgacccagatgagcatcttaggggttttagtaagtcaatttctatatcagatacatttgaaagtgactccccaaataaggacatgcttccttgttacagtgtggccagaattccactacccaatctaaatgaggatctaacttgtggaaatatactaatgtgggaggctgttaccttaaaaactgaggttataggggtgacagctttgatgaatgtgcactctaatggtcaagcaactcatgacaatggtgcaggaaagccagtgcagggcaccagctttcattttttttctgttgggggggaggctttagaattacagggggtggtttttaattacagaacaaagtacccagatggaacaatttttccaaagaatgcaacagtgcaatctcaagtaatgaacacagagcacaaggcgtacctagataagaacaaagcatatcctgttgaatg
| 0 | 4 | 0.2 | 0 | 392 |
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] |
||
88 | 5,110 | 393 |
AB081022.1
|
JC polyomavirus
|
Betapolyomavirus secuhominis
|
Polyomaviridae
|
Betapolyomavirus
|
dsDNA
|
AB081022.1 |JC virus DNA, complete genome, isolate:ME-8|set:AB081022|JC polyomavirus||2002-11-06T00:00:00Z|Yoshiaki Yogo, The Institute of Medical Science, The University of Tokyo, Laboratory of Viral Infection, Department of Microbiology and Immunology; 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639|Japan|Zheng,H., Sugimoto,C., Hasegawa,M., Kobayashi,N., Kanayama,A., Rodas,A., Mejia,M., Nakamichi,J., Guo,J., Kitamura,T., Yogo,Y.|ME-8|Betapolyomavirus secuhominis|Betapolyomavirus|complete|Polyomaviridae|dsDNA|5110|GenBank|||1|Mexico|Mexico||||||
|
catttgaaagtgactccccaaataaggacatgcttccttgttacagtgtggccagaattccactacccaatctaaatgaggatctaacttgtggaaatatactaatgtgggaggctgttaccttaaaaactgaggttataggggtgacagctttgatgaatgtgcactctaatggtcaagcaactcatgacaatggtgcaggaaagccagtgcagggcaccagctttcattttttttctgttgggggggaggctttagaattacagggggtggtttttaattacagaacaaagtacccagatggaacaatttttccaaagaatgcaacagtgcaatctcaagtaatgaacacagagcacaaggcgtacctagataagaacaaagcatatcctgttgaatgttgggttcctgatcccaccagaaatgaaaacacaagatattttgggacactaacaggaggagaaaatgttcctccagttcttcatataacaaacactgccacaacagtgctgcttgatgaatttggtgttgggcctctttgcaaaggtgacaacttgtatttgtcagctgttgatgtttgtggaatgtttactaacagatctggttcccagcagtggagaggactgtccagatattttaaggttcagctgagaaaaaggagggttaaaaacccctacccaatttctttccttcttactgatttgattaacagaaggacccctagagttgatgggcagcctatgtatggtatggatgctcaggtagaggaggttagagtttttgaggggacagaggaacttccaggggacccagacatgatgagatatgttgacagatatggacagttgcaaacaaagatgctgtaatcaaaagcctttattgtaatatgcagtacattttaataaagtttaaccagctttactttacagttgcagtcattttgggggaggggtttttggttttttgaaacattgaaagcctttacagatgtgataagtgcagtgttcctgtgtgtctgcaccagaggcttctgagacctgggaagagcattgtgattgagattcagtgcttgatccatgtccagagtcttctgcttcagaatcttcctctctaggaaagtcaagaatgggtctccccatgccaacattagctttcatagtagaaaatgtatacatgcttatttctaaatccagcctttctttccactgcacaatcctctcatgaatggcagctgcaaagtcagcaactggcctaaaccagattagaagcaaaagcaaagtcatgccactttgcaaaattcttttttctagtaaatattcagagcagcttagtgattttctcaggtaggccttaggtctaaaatctatttgccttacaaatctggcttgtaaagttctaggcactgaatattcattcatggttacaattccaggtggaaacacctgtgttcttttgttttggtgttttctctctaaattaactttaacacttccatctaagtaatctcttaggcaatcaaggttgcttatgccatgtcctgaaggtaaatcccttgactctgcaccactgccttttacatcctcaaatacaaccataaactgatctatacccactcctaactcaaagtttaatctttctaatggcatattaacatttaatgactttcccccacagagatcaagtaaagctgcagctaaagtagttttgccactgtctattggccccttaaatagccagtaccttttttttggaatgtttaatacaatgcattttaagaactcataaatgacagtgtccatttgaggcagcaaacaatgaatccaggccaccccagccatatattgctctaaaacagcattgccatgtgccccaaaaattaagtccattttatcaagcaaaaaattaaacctttcaactaacatttcttctctggtcatatggatactgtcaaccctttgtttggctgctacagtatcaacagcctgctggcaaatgcttttttgatttttgctgtcagcaaaaatttgggcattataatagtgcttttc
| 1 | 4 | 0.5 | 0 | 393 |
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] |
||
88 | 5,110 | 394 |
AB081022.1
|
JC polyomavirus
|
Betapolyomavirus secuhominis
|
Polyomaviridae
|
Betapolyomavirus
|
dsDNA
|
AB081022.1 |JC virus DNA, complete genome, isolate:ME-8|set:AB081022|JC polyomavirus||2002-11-06T00:00:00Z|Yoshiaki Yogo, The Institute of Medical Science, The University of Tokyo, Laboratory of Viral Infection, Department of Microbiology and Immunology; 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639|Japan|Zheng,H., Sugimoto,C., Hasegawa,M., Kobayashi,N., Kanayama,A., Rodas,A., Mejia,M., Nakamichi,J., Guo,J., Kitamura,T., Yogo,Y.|ME-8|Betapolyomavirus secuhominis|Betapolyomavirus|complete|Polyomaviridae|dsDNA|5110|GenBank|||1|Mexico|Mexico||||||
|
taacatttaatgactttcccccacagagatcaagtaaagctgcagctaaagtagttttgccactgtctattggccccttaaatagccagtaccttttttttggaatgtttaatacaatgcattttaagaactcataaatgacagtgtccatttgaggcagcaaacaatgaatccaggccaccccagccatatattgctctaaaacagcattgccatgtgccccaaaaattaagtccattttatcaagcaaaaaattaaacctttcaactaacatttcttctctggtcatatggatactgtcaaccctttgtttggctgctacagtatcaacagcctgctggcaaatgcttttttgatttttgctgtcagcaaaaatttgggcattataatagtgcttttcatgatggttaaagtgatttggctgatcctttttttcacattttttgcattgcagagggttttcctgaaagtctaagtacatgcccataagcaagaaaacatcctcacacttggtgtccaaagcatactgtgtaactaatttccatgaaacctgcttagtttcttctggttcttctgggttaaagtcatgctccttaaggcccccctgaatactttcttccactactgcatatggctgtctacacaaggcactgtaaaacaagtattccttattcacacctttacaaattaaaaaactaaaggtacatagtttttgacagtaattattaattgctgaaactctatgtctatgtggtgttagaaaaaacaagatattatgacccccaaaaccatgtctacttataaaggttacagaatatttttccataagtttcttatataaaatttgagctttttctttagtggtatacacagcaaaagaagcaacagttctattactaaacacagcttgactgaggaatgcatgcagatctacaggaaagtctttagggtcttctaccttttttttcttcttaggtggggtagagtgttgggatcctgtgttttcatcatcactggcaaacatttcttcatggcaaaacaggtcttcatcccacttctcattaaatgtattccaccaggattcccattcatctgttccataggttggcacctaaaaacaaaaaattaagtttattgtaaaaacaaaatgccctgcaaaagaaaaattgtggtttaccttaaagctttagatccctgtagggggtgtctccaagaaccttctcccagcaatgaagagcttcttgggttaagtcacacccaaaccattgtctgaagcaatcaaagcaatagcaatctatccacacaagtgggctgcttcttaaaaattttctgtttctatgccttaattttagcatgcacattaaacaggggcaatgcactgaaggattagtggcacaattaggccattccttgcaataaagggtatcagaattaggaggaaaatcacaaccaacctctgaactattccatgtaccaaaatcaggctgatgagcaacttttacaccttgttccatttttttatataaaaaattcattctcttcattttgtcttcgtccccacctttatcagggtgaagttctttgcattttttcagataagcttttctcatgacaggaatgtttccccatgcagatctatcaaggcctaataaatccatgagctccatggattcctccctattcagcactttgtccatttttgctttttgtagcaaaaaattagtgcaaaaaagggaaaaacaagggaatttccctggcctcctaaaaagcctccacgcccttactacttctgagtaagcttggaggcggaggcg
| 2 | 4 | 0.8 | 0 | 394 |
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||
89 | 3,947 | 395 |
NC_007582.1
|
Chum salmon reovirus CS
|
Aquareovirus A
|
Spinareoviridae
|
Aquareovirus
|
dsRNA
|
NC_007582.1 |Chum salmon reovirus CS segment 1, complete sequence|GCF_000866805.1|Chum salmon reovirus CS||2005-11-07T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Winton,J.R., Lannan,C.N., Fryer,J.L., Hedrick,R.P., Meyers,T.R., Plumb,J.A., Yamamoto,T., Rao,S., Carner,G.R., Chen,W.||Aquareovirus A|Aquareovirus|complete|Spinareoviridae|dsRNA|3947|RefSeq||1|1||||||||PRJNA485481
|
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||
89 | 3,947 | 396 |
NC_007582.1
|
Chum salmon reovirus CS
|
Aquareovirus A
|
Spinareoviridae
|
Aquareovirus
|
dsRNA
|
NC_007582.1 |Chum salmon reovirus CS segment 1, complete sequence|GCF_000866805.1|Chum salmon reovirus CS||2005-11-07T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Winton,J.R., Lannan,C.N., Fryer,J.L., Hedrick,R.P., Meyers,T.R., Plumb,J.A., Yamamoto,T., Rao,S., Carner,G.R., Chen,W.||Aquareovirus A|Aquareovirus|complete|Spinareoviridae|dsRNA|3947|RefSeq||1|1||||||||PRJNA485481
|
ataccgtctaagatatcacagtttggctacgatgttgcgaacggaagcatcatggatgcaactctcgccccacccactggcaccttcacgtttgtgtactctgacgtcgatcaagtggaagacgcgggcctatccattgtagctacgaatcgcgccgctgtggccgtgaccaacattgccctgtccatgacgactgccggaggtttaactgtcgttaaggttaattttcccactcctgccttctggacccaattgttccggaaccatgccactgacgctcgtgctttgtacatcctgaagcctctaatcgttaattcggttgaagtgttcctcctgttcgtcagtcgcgctacagcgggcaatctcgtatcctcaccagccctcaggcaattcctcgtgcagctattcgatcgctccacctcactgtctgaggtcatggcccacgtgcctttactgggggacgtcgatactggtgtaactactctcgggttcaacgcctgccgtctatatagtccggacctgcctactgttaacatcacccccgagattcagaccctggcctaccagctagccactatcgtgccttccacttcattcattgcgcgggaagattatgacggcgctacggctgtgacgttctacgggaaacggacgtttctgtcgcgcaaccggcttgatcgtctggtggacgtgcctgtccccgctaccaacgccattaatcatcagacacggttcacaggctcacctgtctaccagttgttccccacgaaccctgccccggtgactcagctcctttggctagcgcgtacaaccggattatacacggccagctggcccagattgctcctcagtcgctggttgatttgtggtaccggcccggagtgtcgcattctttcattaatgccaccagccacctccgtgacgatgattgactcccggcctcctgcagaatctctcgccgccttcaaccccgccatgaatcagtacatcgtggggaacttcttagacccggctcaatgggtggcgaatcctcacgactccctcacagccatcttctcattgggcgctgccttcgctggtgcgggtcaagacttggtcgtcggtctcactgcattcctgcgtttgattcaaccgagcaacgtccagcatctctggctgcagctgaacacaacactaacttcaacggcatccctgcccggtcttatcgagatagatacgcggactggacaatatattttcaacggcggacaacggaccgagccctacgccgccccagacgctatccttgcggccatccggctcgtctatcctgccgctacgacctcctggctgacggcttcctccacgatggactggactgagtacgtcatcggcctcggctcctccatgtcactggatgacgtatccaccatgatctcgtactcaggcttaacgcccattctgcacattgacctgacccagcggcccatggatgtgccagtgccattagtggtaggagttcaggctgttatccacgtggccgcgcccgtccagcagacgaccgttattggttccatggccggcgtccaggtttttacagccgacggcgtaaacgctccttccaccatcggacctctagctgtcgtgtgggacccggtcttgtcacgatgggatttaaccatcaccccgaatcagccaggtgtcctcgacgtggtagtggatcataatggagttcttctcaaccgtggttccactactattgctttaccccctgccaccattgtcatcacctttcctcaggcggctaaccgcgacttcactaacgccggtaatgacgctgctgtcgtgtgtgatgccttctaccgtctcggtgtttttgtcagtgtcaatggcgctttccagcccgtaaaccccgagcgcgcagcgatcgtcaccgcagcaaacgcgcgtgtgttacactacgtttacgacctctccgataatcatgtcctcatgtacgtttgcgacattacagacaacaacatcggtcgcaacgtcgctctcccattggcggacatattccagaccct
| 1 | 3 | 0.7 | 0 | 396 |
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] |
||
90 | 1,775 | 397 |
KP316686.1
|
Beet necrotic yellow vein virus
|
Beet necrotic yellow vein virus
|
Benyviridae
|
Benyvirus
|
ssRNA(+)
|
KP316686.1 |Beet necrotic yellow vein virus isolate KY2P25-2 segment RNA3, complete sequence|set:2e30a6e160c5a7ce9c8e17fee30483d8b91553e2|Beet necrotic yellow vein virus||2015-06-02T00:00:00Z|China Agricultural University, Plant Pathology|China|Zhuo,N., Jiang,N., Zhang,C., Zhang,Z.Y., Zhang,G.Z., Han,C.G., Wang,Y.|KY2P25-2|Beet necrotic yellow vein virus|Benyvirus|complete|Benyviridae|ssRNA(+)|1775|GenBank||RNA3|1|China: Heilongjiang|China||||2014-09-15||
|
aaattcaaaatttaccattacatattggtatttatttaccctcagttggtgatatatgtgaggacgctagcctgttgggtttcctgaccgaccaaatccaagcgagcttaatccaagtacctcgtctcaaattgagtgtcaagtgaataagcatagtgaccccatcgtttcagggtagttgacggctattaatagatatactacaaacgcttctctttatttatcaccaacatgggatgtaatgtttatgcgtgagcctacggccgcattgtaaaattagtggttttgaatttctattcttcggaatatacaaggtttaaaagaccagcatttgggttaaaaatttttaaaccttactatctttaactagtaactcgaactcgatttatattcagattttgaacgtcgagttgttgtattttctgatcatcattaagtggccgtcatgggtgatatattaggcgcagtttatgatttagggcacggaccttacctagcacggcgtacggtttatgagaatcgttggattcttagcacaaatggtaatatctgtcgagctattaacttgttaactcacgataatcgtacttcactggtgtatcacaataatactaaacgcataaggtttcgtgggttattgtgtgcttttcataggcctttttgtgggtttcgtgccttatgtagagtaatgttatgttctctacctcgtttgtgtgacatccctatcaatggatctcgcgactttgttgcagatcctaccagactcgacagctctgttaatgagttgttggtttctaatggtctcgtcatccactatgatcgtgctcataatgttcccatacacactgatggttttgaagttgtagattttacgactgtctttcgtggtcctggaaattttcttttgcctaatgcaacaaatttccctcggtcaaccacaaccgatcaggtttacatggtgtgtttggtaaacacggttaattgtgtgttacgttttgagtccgaacttacagtgtgggttcactctggtttgtatacaggtgatgttttaggtgtggataataatgttattcaagcccctgacggtgttgatgatgatgattagagttatcacaatttcaacaacacacttattggtgtgttgttctgttacaccatttgaaagtttaataattgtctcaattcgattgttgatctggttgggacaattattttattttcttttggtgtaatcgtccgaagacgttaaactacacgtgatttcacggtgtttgatgagaagattgtttaacggtgttacgttgtgcacttttaagccttcttctcattttaccacatgtgatgattgtagcctgtgggtcgttatgtggacaattatggttacttatttgtgaatgataaagagtgtgcggtagccgactttatgcgagtgggagtagttgtgttattactactattctggttcgtataaagatccttgacggcggcatcgtgggttccacagccggttacatgatgttcccgtccgtttacgaaggtttaactgtgagccttgtattttacgaatacacagtttttatcttaacaggctcgttcacaagcctccttttacattaagtttaaaggtttatgtggacacaaaaatatggcttattggttatgctaaacctcatatcatgttataatattcgtttcatattataattaaggttaagatgtactgactgggtgtgaaatgtaccagtccttgtagggttctctgtcagtgtattgac
| 0 | 2 | 0.5 | 0 | 397 |
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||
91 | 9,026 | 398 |
MZ922483.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MZ922483.1 |HIV-1 isolate 1756_EM_06 from USA, complete genome||Human immunodeficiency virus 1||2021-11-02T00:00:00Z|Westmead Institute for Medical Research, Centre for Virus Research|Australia|Morcilla,V., Bacchus-Souffan,C., Fisher,K., Horsburgh,B.A., Hiener,B., Wang,X.Q., Schlub,T.E., Fitch,M., Hoh,R., Hecht,F.M., Martin,J.N., Deeks,S.G., Hellerstein,M.K., McCune,J.M., Hunt,P.W., Palmer,S., Horsburgh,B., Schlub,T., Hecht,F., Martin,J., Deeks,S., Hellerstein,M., McCune,J., Hunt,P.|1756_EM_06|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|9026|GenBank|||1|USA|USA||Homo sapiens||2016||
|
gatctctcgacgcaggactcggcttgctgaagtgcgcacggcaagaggcgaggggtggtgaccggtgaccggtgagtacgccaaaattcttttgactagcggaggctagaaggagagagatgggtgcgagagcgtcagtattaagcgcgggggaattagataaatgggagaaaattcggctaaggccagggggaaagaaacaatatagactaaaacatattgtatgggcaagcagggagctagaacgatttgcagtcaaccctggcctgttagaaacagcagaaggctgcaggcaaatactgggacagctacaaccgtcccttcagacaggatcagaagaacttaggtcattatttaatacaatagcaaccctctattgtgtacatcaaaaaatagaaataagagacaccaaagaagccttagataggatagaggaagagcaaaataaatgtaagaaaaaggcacagcaagcagccgctgacacaggaagtaacagtaacgtcagccaaaatttccctatagtgcagaaccttcaagggcaaatggtacatcaggccatatcacctagaactttaaatgcatgggtgaaagtagtagaagaaaaggctttcagcccagaagtgatacctatgttttcagctctatcagaaggagccaccccacaggacttaaacaccatgctaaacacagtggggggacatcaagcagctatgcagatgttaaaagagaccattaatgaggaagctgcagagtgggacagattgcatccagtacatgcagggcctattgcaccaggccaaatgagagaaccaaggggaagtgatatagcaggaactactagtacccttcaggaacaaataggatggatgacaaataatccacctattccagtaggagaaatctataaaagatggataatcctgggattaaataaaatagtaaggatgtatagccctaccagcattttggatataagacaaggaccaaaggaaccctttagagactatgtagaccggttctataaaactctaagggctgagcaagcttcacaagaagtaaaaaattggatgacagaaaccttgttggtccaaaatgcaaacccagattgtaaaaccattttaaaagcattagggccaggagctacactagaagacatgatgacagcatgtcagggagtgggaggacctggccataaagcaagagttttggctgaagcaatgagccaagtaacaaatactaataccataatgatgcagggaggtaatttcaagaaccaaagaaagattgttaaatgtttcaattgtggcaaagtagggcacatagcaaaaaattgcagggcccctaggaaaaagggctgttggaaatgtgggaaggaaggacaccaaatgagagagtgtactgagagacaggccaattttttagggaaaatctggccttccagcaaggaaaggccagggaattttcttcagagcagaccagagccaacagccccaccagccccaccagaggagagtttcaggtttggggaggagacagcaattccatctcagaagcaagagccgagggacaaggaactgtatcccttttcttccctcaaatcactctttggcaacgacccattgtcacaataaagataggggggcaaataaaagaagctctactagatacaggagcagatgatacagtattagaagaaatgaatttgctgggaagatggaaaccaaaaatgatagggggaattggaggttttatcaaagtaagacagtatgatcagatacccatagaaatctgtgggcataaagctataggtacagtattagtaggacctactcctgtcaacataattggaagaaatctgttgactcagattggttgcactttaaattttcccattagtcctattgaaactgtaccagtaaaattaaaaccaggaatggatggtccaagagttaaacaatggccattgacagaagaaaaaataaaagccttaatagaaatttgtacagaaatggaaaaggaaggaaaaatttcaaaaattggacctgaaa
| 0 | 6 | 0.2 | 0 | 398 |
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|
91 | 9,026 | 399 |
MZ922483.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MZ922483.1 |HIV-1 isolate 1756_EM_06 from USA, complete genome||Human immunodeficiency virus 1||2021-11-02T00:00:00Z|Westmead Institute for Medical Research, Centre for Virus Research|Australia|Morcilla,V., Bacchus-Souffan,C., Fisher,K., Horsburgh,B.A., Hiener,B., Wang,X.Q., Schlub,T.E., Fitch,M., Hoh,R., Hecht,F.M., Martin,J.N., Deeks,S.G., Hellerstein,M.K., McCune,J.M., Hunt,P.W., Palmer,S., Horsburgh,B., Schlub,T., Hecht,F., Martin,J., Deeks,S., Hellerstein,M., McCune,J., Hunt,P.|1756_EM_06|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|9026|GenBank|||1|USA|USA||Homo sapiens||2016||
|
aaagaagctctactagatacaggagcagatgatacagtattagaagaaatgaatttgctgggaagatggaaaccaaaaatgatagggggaattggaggttttatcaaagtaagacagtatgatcagatacccatagaaatctgtgggcataaagctataggtacagtattagtaggacctactcctgtcaacataattggaagaaatctgttgactcagattggttgcactttaaattttcccattagtcctattgaaactgtaccagtaaaattaaaaccaggaatggatggtccaagagttaaacaatggccattgacagaagaaaaaataaaagccttaatagaaatttgtacagaaatggaaaaggaaggaaaaatttcaaaaattggacctgaaaatccatacaatactccagtatttgccataaagaaaaaagacagtactaaatggagaaaattagtagattttagagaacttaataaaaggactcaggatttctgggaagtccaactaggaataccacatcctgcagggttaaagaagaacaaatcagtgacagtattggatgtgggtgatgcatatttttcagttcccttagacaaggacttcaggaaatatactgcatttaccatacctagtgtaaacaatgagacaccagggattagatatcaatacaatgtgcttccacagggatggaaaggatcaccagcaatattccaaagtagcatgacaaaaatcttagatccttttagaaaacaaaatccagacataattatctatcaatacatggatgatttgtatgtaggatctgacttagaaataggacaacatagaacaaaagtagaggaactgagacaacatctgttgaggtggggattcaccacaccagacaaaaaacatcagaaagaacctccattcctttggatgggttatgagctccatcctgataaatggactgtacagcctataatgctaccagacaaagaaagctggactgtcaatgacatacagaaattagtgggaaaattgaattgggcaagtcaaatttacccagggattaaaataaagcaattatgtagactcattaggggagccaaagcactaacagaagtagtacctctaacagaggaagcagagctagaactggcagaaaacagggagattctaaaagaaccagtacatggagtgtattatgacccatcaaaagacttaatagcagaaatacagaagcaagggaaagaccaatggacataccaaatttatcaagaaccatttaaaaatctgaaaacaggaaaatatgcaaaatcaaggggtgcccacactaatgatgtaaaacaattaacagaggcagtacaaaaaatagccacagaaggcatagtaatatggggaaagattcctaagtttaaactacccatacaaaaagaaacatgggaaacatggtggacagagtattggcaagccacctggatccctgagtgggagtttgtcaataccccttacctagtaaaattatggtaccagttagaaaaagaacccatagtaggagcagaaactttctatgtagatggggcagccaatagggagactaaattaggaaaagcaggatatgttactgatagaggaagacaaaaggttgtctccctagctgacacaacaaatcagaagactgaattacaagcaattcatctagccttgcaggattcgggattagaagtaaacatagtaacagactcacaatatgcattaggaatcattcaagcacacccagataagagtgaatcggaattagtcaatcaaataatagaacagttaataagcaaggaaaaggtctacctagcatgggtaccagcacacaaaggaattggaggaaatgaacaagtagataaattagttagttctggaatcaggaaagtactatttttagatggaatagataaggcccaagaagaccatgagaaatatcacagtaattggagagcaatggctagtgactttaacctgccacctgtagtagcaaaagaaatagtagccagctgtgacaaatg
| 1 | 6 | 0.3 | 0 | 399 |
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] |
|
91 | 9,026 | 400 |
MZ922483.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MZ922483.1 |HIV-1 isolate 1756_EM_06 from USA, complete genome||Human immunodeficiency virus 1||2021-11-02T00:00:00Z|Westmead Institute for Medical Research, Centre for Virus Research|Australia|Morcilla,V., Bacchus-Souffan,C., Fisher,K., Horsburgh,B.A., Hiener,B., Wang,X.Q., Schlub,T.E., Fitch,M., Hoh,R., Hecht,F.M., Martin,J.N., Deeks,S.G., Hellerstein,M.K., McCune,J.M., Hunt,P.W., Palmer,S., Horsburgh,B., Schlub,T., Hecht,F., Martin,J., Deeks,S., Hellerstein,M., McCune,J., Hunt,P.|1756_EM_06|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|9026|GenBank|||1|USA|USA||Homo sapiens||2016||
|
ctgacacaacaaatcagaagactgaattacaagcaattcatctagccttgcaggattcgggattagaagtaaacatagtaacagactcacaatatgcattaggaatcattcaagcacacccagataagagtgaatcggaattagtcaatcaaataatagaacagttaataagcaaggaaaaggtctacctagcatgggtaccagcacacaaaggaattggaggaaatgaacaagtagataaattagttagttctggaatcaggaaagtactatttttagatggaatagataaggcccaagaagaccatgagaaatatcacagtaattggagagcaatggctagtgactttaacctgccacctgtagtagcaaaagaaatagtagccagctgtgacaaatgtcaacaaaagggagaagcaatgcatggacaagtagactgtagtccaggaatatggcaattggattgtacacatttagaaggaaaaattatcctggtagcagtccatgtagccagtggatatatagaagcagaagttatcccagcagaaacagggcaagaaacagcatactttatcttaaaactagcaggaagatggccagtaaaaacaatacacacagacaatggcggcaatttcatcagtactacggttaaagccgcctgttggtgggcggggatcaagcaggaatttgggattccctataatcctcaaagtcagggagtagtagaatctatgaataaagaattaaagaaaattataggacaagtaagagatcaggctgaacatcttaagacagcagtacaaatggcagtatttgtccacaattttaaaagaaaaggggggattggggggtacagtgcaggagaaagaataatagacataatagcatcagacatacaaactaaagaactacaaaaacaaattacaaaacttcacaattttcgggtttattacagggacagcagagatccactttggaaaggaccggcaaaacttctgtggaaaggtgaaggggcagtagtaatacaggataatagtgacataaaagtagtgccaagaagaaaagcaaagatcattagggattatggaaaacagatggcaggtgatgattgtgtggcaagtagacaggatgaggattagaacatggaacagtatagtaaaacaccatatgcatatttcaaagaaagctaagggatggttttatagacatcactatgagagcaatcatccaaaaataagttcagaagtacacatcccactaggggatgctaaattggtagtaataacatattggggtctacatacaggagaaagagactggcatttgggtcagggagtctccatagaatggagaagaaggagatataatacacaagtagatcctgacctagcagaccaactaattcatctgtattactttgattgttttacagaatctgccataagaaatgccatattaggacatagagttagtcctaggtgtgaatatcaagcaggacataacaaggtaggatctctacagtacttggcactagtagcattaataaaaccaaaaaggagaaagccacctttgcccagtgttgcaaaactaacagaggatagatggaacaagccccagaggaccaagggccacagagggagccatacaatgaatggacactagagcttttagaggagcttaagagtgaagctgttagacattttcccagggcatggcttcatggcttaggacaatatatctatgaaacttatggggatacttgggccggagtggaagccataataagaactctgcaacaactgctgcttattcatttcagaattgggtgtcaacatagcagaataggcattaccccacgaaggagaccaagaaatggagccagtagatcctaggctagagccatggaagcatccaggaagccagcctagaaccgcttgtacaacttgctattgtaaaaagtgctgttttcattgccaagtttgtttcacaaaaaaaggcttaggcatctcctatggcaggaagaagtggagacagcgacgacgagctca
| 2 | 6 | 0.5 | 0 | 400 |
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|
91 | 9,026 | 401 |
MZ922483.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MZ922483.1 |HIV-1 isolate 1756_EM_06 from USA, complete genome||Human immunodeficiency virus 1||2021-11-02T00:00:00Z|Westmead Institute for Medical Research, Centre for Virus Research|Australia|Morcilla,V., Bacchus-Souffan,C., Fisher,K., Horsburgh,B.A., Hiener,B., Wang,X.Q., Schlub,T.E., Fitch,M., Hoh,R., Hecht,F.M., Martin,J.N., Deeks,S.G., Hellerstein,M.K., McCune,J.M., Hunt,P.W., Palmer,S., Horsburgh,B., Schlub,T., Hecht,F., Martin,J., Deeks,S., Hellerstein,M., McCune,J., Hunt,P.|1756_EM_06|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|9026|GenBank|||1|USA|USA||Homo sapiens||2016||
|
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| 3 | 6 | 0.7 | 0 | 401 |
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|
91 | 9,026 | 402 |
MZ922483.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MZ922483.1 |HIV-1 isolate 1756_EM_06 from USA, complete genome||Human immunodeficiency virus 1||2021-11-02T00:00:00Z|Westmead Institute for Medical Research, Centre for Virus Research|Australia|Morcilla,V., Bacchus-Souffan,C., Fisher,K., Horsburgh,B.A., Hiener,B., Wang,X.Q., Schlub,T.E., Fitch,M., Hoh,R., Hecht,F.M., Martin,J.N., Deeks,S.G., Hellerstein,M.K., McCune,J.M., Hunt,P.W., Palmer,S., Horsburgh,B., Schlub,T., Hecht,F., Martin,J., Deeks,S., Hellerstein,M., McCune,J., Hunt,P.|1756_EM_06|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|9026|GenBank|||1|USA|USA||Homo sapiens||2016||
|
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| 4 | 6 | 0.8 | 0 | 402 |
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] |
|
92 | 1,324 | 403 |
MH510252.1
|
Cairina moschata
|
Muscovy duck reovirus
|
Avian orthoreovirus
|
Spinareoviridae
|
Orthoreovirus
|
dsRNA
|
MH510252.1 |Muscovy duck reovirus strain SH12 segment S2, complete sequence|set:d57962012349b6635eb403f2797d0fa033c9b6f8|Muscovy duck reovirus||2019-05-31T00:00:00Z|Foshan University, College of Life Science and Engineering|China|Zhang,X., Huang,S., Li,Z., Mei,M., Li,W.||Avian orthoreovirus|Orthoreovirus|complete|Spinareoviridae|dsRNA|1324|GenBank||S2||China|China||Cairina moschata||2012-06||
|
gctttttctcccacgatggcgcgtgccgtgtacgactttttatctacgcctttcggtaaccgtggtctagcaactaaccgtactcaactgtcgtcactactgtcaagttcaaattcgccgtggcaacgctttttgtccgccttaactccactgaccgctccaggcattgtttcaacccctgaggcaccctacccgggttcatcgttataccaggagtccatgcttcacagcgctactatccctgggattctaggtaatagagacgcgtggcgcaatttcaacgtcttcggcttttcatggacagatgaaggtttgtcaggacttgtcgctgctcaggaccctcctccagctccaccgtaccaaccagcttcgggacagtggtctgatctgcttcagtatcctcgatgggctaatcgtcaacgtgagttgcagtctaaatatcccattctgttgagatctactttgctttcagctatgcgcgctggaccggtgttgtacgttgagacttggcccaacatgatttctggtcgacttgctgactggttcatgtcgcagtatggaaacaacttcgttgacatgtgtgcacgattaactcagtcctgcatgaacatgccagttgagccggatggtaattatgaccagcagatgcgagcattaattagtctgtggctcctctcgtatattggcgttgtgaatcaatctaacactattaacggcttctactttgcttccaagacgcgggggcaggctatggataactggacgctgttctatgctaccaacaccaatcgggtgcagattactcagcgccactttgcctacgtttgcgctcgctcccccgactggaatgtcgataagtcctggatcagcgctgccaatttgactgccattgtcatggcttgccgccagccgccagcctttgccaaccagggggtaatcaaccaggcccagaatcgacccggattctcgatgaatggtggaacgcctgtgcacgagctgaacctgctgactaccgctcaagcttgtatccagcagtgggtcgtagctggtttgatctcagcagctaagggacagtccatgacgcaggaggcgaatgacttctcgaacctcatccaagccgatcttgggcggatcaaagcgcaagatgacgcgttgtacaaccaacaacctggttacgctcgtcgcattaagccgtttgccaacggagattggacgcctggaatgactgcgcaagcattagctctactagccacttttactgtctaggcgtagggtcgtacgctgcctgagtccagccctccggtagcgcgtgggtgtattcatc
| 0 | 1 | 1 | 0 | 403 |
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] |
|
94 | 2,607 | 404 |
JX857692.1
|
Sida ciliaris
|
Sida ciliaris golden mosaic virus
|
Sida ciliaris golden mosaic virus
|
Geminiviridae
|
Begomovirus
|
ssDNA(+/-)
|
JX857692.1 |Sida ciliaris golden mosaic virus strain Venezuela:Lara:M3:2009 segment DNA-B, complete sequence|set:863817d0baa7f54d99fe6ee5faebeacac7b2e3f6|Sida ciliaris golden mosaic virus||2012-12-15T00:00:00Z|IVIC, CMBC|Venezuela|Zambrano,K.A., Marys,E.E., Mendez,N.||Sida ciliaris golden mosaic virus|Begomovirus|complete|Geminiviridae|ssDNA(+/-)|2607|GenBank||DNA-B||Venezuela:Lara|Venezuela||Sida ciliaris||2009||
|
accggatggccgcgcgattttccccccccccctacgtggagctctggtggccgttcgatccctggtgctggtgttcccaacgctcccacccgctcctacgcgcgctcccattggtgcgggtaactcactcacgcttttgagtctggactttaatttgaattaaagtctacaactttatgtcgcgcgacttgatttgaagtgtgaatcttcaccccgcgacgactaagtatggcccattgtacccccttaagtacgtggcggatttctgtccaagttgctgagtcagtataagttcccagtctaacgacccttgtctatataattgatgtgtatgatatattatattcaagtgactcagctgtttaccacgtttattttatcaactgcatttattatttagccagtgttatctcgggataatgtatattattaggaataaacgtggttcctcttctacccagcgacggtattatccacgtaactcagtgtctaatcgttcaaccatttcccgaagacatgacttcaagcgtcgagctgggtatggtagcaagcccactgatgagcccaagatgacaagccaacgcatccatgagaatcagtatggcactgattttgctatggcccataacacagctgtccaaacattcatcagctacccttctatctccaagtctctaccgaacagaacccggtcatacatcaagttgaaacgacttcgtttcaagggaacggtgaagattgaacgcgtcccgactgacgttaacatggactgttcagccccgaagaccgaaggtgtcttctccttggttgtagtcgttgatcggaagccccacttgacacctgctggtggtctacatacgttcgatgaactgttcggtgcaaggatcaacagccacggtaatttatgtataagtccctcattgaaggaccgtttctacatacgccacgtgttgaaacgcgtgttgtcagtcgagaaggatacggttatggtggacatcgaaggatccactcctctctctaacaggcgttttaattgctgggctacgtttaaggatctagatattgagacacgcaagggtgtttatgacaacataagcaagaacgccctgttagtttattattgctggatgtcggatactgtatctaaggcatcgatatttgtatcgtatgacctcgattatattggatagttaataatgacaggcaataattataatcataaaaaatttatttaaaattttttggctctgatcgactacaattactcttaatacattcctgcaccgttgtcctgacaaggtcgtttaattgggcaactgacattgtaatgttggactcggccctctttgccccaactattgaagcagactcccctggatccagtgcgctggttcccaatctgtgaagctctctgtacggatggatctcgttctccacctctgaatccgcgtctgatggcccaagtccaatggtgcttcttgaagcccaagactcgccaggcttgatctcaattgggcctctgagcccaagtctggacatagacgcgcatctcaaggccttcctttcccatcgtccgtaatccacgtgggagaaatctacatccttctccgagaactgtttggaaaggattttgacagtcggcgctttgaaggggatatcgactgagtgtttcgccgtcgataatttcagtttccctttgaatttcgcgaagtgggtcctttggtgaacattcgtgtcggaaactctgtaatagagtttccatggaattgggtctttgagggagaagaaggacgatgagaaatagtggagatctatgttgcatctgatcggaaaagtccacgacgcttgtagcgactcgttgtcggtcattctctggtcatgaatctccactataacagtaccggcggcgttgataggcacttgctgcctgtactctatgacgcagtggtcaatcttcatacagctacgactgagccttgcagtcaactgagccgccgttgaaggaaattggaggatgatctcagttaggtcatgagaaagctgatact
| 0 | 2 | 0.5 | 0 | 404 |
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|
95 | 7,066 | 406 |
NC_034453.1
|
Mustela putorius furo
|
Ferret parechovirus
|
Parechovirus D
|
feces
|
Picornaviridae
|
Parechovirus
|
ssRNA(+)
|
NC_034453.1 |Ferret parechovirus isolate MpPeV1 polyprotein gene, complete cds|GCF_002118445.1|Ferret parechovirus||2017-05-05T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Smits,S.L., Raj,V.S., Oduber,M.D., Schapendonk,C.M., Bodewes,R., Provacia,L., Stittelaar,K.J., Osterhaus,A.D., Haagmans,B.L., Raj,S.V., Oduber,M., Schapendonk,C.M.E., Osterhaus,A.D.M.E.|MpPeV1|Parechovirus D|Parechovirus|complete|Picornaviridae|ssRNA(+)|7066|RefSeq|||1|Netherlands|Netherlands||Mustela putorius furo|feces|||PRJNA485481
|
ctcttggatgaagcacacaggagaaacacttggccgcatcacggtatttaatgaaaccaaattaacttataattctgccagtgtaaacacagtgaaatgtgttgtttcaatgaaggccggaccagattttacaatgatgagtcccaaagaaacgcttcattccttgcaggctccaacttcatggggttcggaaatggaccttaccgatccacttgatgactcaactgatggggttaaagaagttgaaggtgcagctgcttttcaatcatcaacttgtgattacagtcaagcagatgatgctgctgaggacactggcctcgctgcaaaggaaaatgccggaacacttaatgaagttgtgcaagctaaaccacctaaatttattaactttgatacttgcaagagacacatttacactattagtcacactagagttgacaattttttcgggcgagctcaaagaattgcagaattcgcatggagtgataaagcattgaaatctgaacctttgtcatggccaaatcataatcatcaggctatggcccggctttttgcttatttcgctggggaaataaatctgcatctagtgaatgaatctgataaacacatttctgttggccatacttatgatctacgggatggttcttctgattacggtgtctcatccagtggtgttatggtcatcccacctcagacagcaatgtctatgtgttgtccttggtactcccatactcctttcaggcctactcgagctctctcacaaagtggaatcaaaccacttggcacaatttggttcaaaccggaagctgaaagtggcactcttattgtctacttgtctttgcgaaatccaaattttgtttttccactcccatctccaaaaactgcaactgctagttcactttcttctcaggatgatgctcttttctgtctctatagcgctgaacgactttctgatattctgtctgcattggaagtgagcccagatgaaccttttgtgccccctcagaactcacaggataattcactgtcaatgcgcatgctaagaagacttggctacagaagggagcttctcaaacagtgtggagatgtagaagaaaatcccggcccctttcccaacagagcaggaaattcacagcagattaatccaactatgcaccatgcctggcttgtctatcgagacagagggatctacaagcattatggtgtgcaatgtggtgattcagtgtaccacctcgagacagaggatatcatcgacgctgctcttgctggaaaagctgttttcacttgtgagccagcagattcttcttggacaagatcacaaccgcttgagctcgattattttactcaagtttaccttgatgccagtgtcggctctgagcacatcttttctgcaagaacaaactgtgaaacgattgtgcgtgacatgttccccaatataccaggcatttctcagtcacaggcgcttgggcttgctggacttatcctcgtctcagcttctactcttggactctgtgctgcttccttttctgctcaggaacttagagacatgctcaacttgtcgttccaacagaactctgatgggtacattaactctcttgtacaaaaagctatgtcttacttttcatctattctctgtgaaacgctcgctgcggacattattaaaacaatcatcaaatacctagtcaggttattctgttacattgtcatgtactgtcatgctccaaatttgatgacaacaatgtgcatgtctacacttcttgttcttgatgtcactgatgcaaaacaactttcttcagacaccacgacccttttcaaaggtttgcttgaaggtgacattaaaggattttgtgagaggattgtgcactgtctccaatttgacacaactgaagaagaaacagaactcaagttggaaacattgaggcaagcagaaagaatgttgtcccatgaatttgacacttttgttggacaaacaaacgagtcaccaattaaagaattcaatgcattcactacagcatccaaaaatgtctcttggtggcttgggatttttaagc
| 1 | 5 | 0.4 | 0 | 406 |
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] |
95 | 7,066 | 407 |
NC_034453.1
|
Mustela putorius furo
|
Ferret parechovirus
|
Parechovirus D
|
feces
|
Picornaviridae
|
Parechovirus
|
ssRNA(+)
|
NC_034453.1 |Ferret parechovirus isolate MpPeV1 polyprotein gene, complete cds|GCF_002118445.1|Ferret parechovirus||2017-05-05T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Smits,S.L., Raj,V.S., Oduber,M.D., Schapendonk,C.M., Bodewes,R., Provacia,L., Stittelaar,K.J., Osterhaus,A.D., Haagmans,B.L., Raj,S.V., Oduber,M., Schapendonk,C.M.E., Osterhaus,A.D.M.E.|MpPeV1|Parechovirus D|Parechovirus|complete|Picornaviridae|ssRNA(+)|7066|RefSeq|||1|Netherlands|Netherlands||Mustela putorius furo|feces|||PRJNA485481
|
gacattattaaaacaatcatcaaatacctagtcaggttattctgttacattgtcatgtactgtcatgctccaaatttgatgacaacaatgtgcatgtctacacttcttgttcttgatgtcactgatgcaaaacaactttcttcagacaccacgacccttttcaaaggtttgcttgaaggtgacattaaaggattttgtgagaggattgtgcactgtctccaatttgacacaactgaagaagaaacagaactcaagttggaaacattgaggcaagcagaaagaatgttgtcccatgaatttgacacttttgttggacaaacaaacgagtcaccaattaaagaattcaatgcattcactacagcatccaaaaatgtctcttggtggcttgggatttttaagcaaataattatgtttttcaaaaatcttttttctccgaattctaatgcaagaagcctacagtggcttgcggaccatgagggccagatctgtgatctccttgcaacttgcaacaaccacattattgacatgaagaaaccagaaaatcaaagagatcctagatttcatgacaagcataagtggttgtgccgtagattgacagatgttgcaacaattgtgtacaagtctgcaacttactccccattggccacacaagtcctcagattaaatgcagaaatggcaaaaataaggttgactcaaccgtcatcagggaacatggtgaggcaagagccagtcggtgtttggatttgtggagacccagggcaaggaaagagtttctttgcccatgccttaattaaggcagtccaaaagaaaacgaaattggttggaatcttcacgaacccaaccggctctgacttcatggatggctatgctcaccaggacattcacatcattgatgatgctggacaaaaccgtgaagaaaaagaccttgcacttttgtgccaatgcatttcatctgtacctttcacagtccctatggcagatttgtgtgaaaaaggaattcaatacactagtaaattggtgattgctacatctaatagaactgacttcacaactgtggttctctctgatcatggagcgctggcacgtcggtttcccgtttacttaaggattagagcaaaacaacagttccaaaagaatgggaaaattgacactgctgcagcaatgatctacatgaaaacaggagaaccatgggaggtttcaactgatggttacaaatggtcaccctgcaacatggatgaaattgcaacaactgtggcaaatgacatcattagaaaacatgatgcagtgtctgcatggacaaatatgatggaagaagatgaaggtcctattgtccatcaagatgtctatgacatgtgcctgaatgacatcacagcagactgccgcagactcgatgacatctgccaaaagcttgaagcagatcttaatggcctggattctccatttgaggctttgagaaaacgctctgacatggaacttgacaaagcacctacaactgtgatttcatggttcagaaagaagttaacagctctgaggaattggtgccaaagaaatgttggatggctctcattggtttctgtcttaactacaggcgcatcaatgctggcaacttatttgatccttagaaaaccagacccgcccgctgctgacaaccgggcatataaccctcaaactacaaatccgaaggggaagtctgtgttcactatgttgcctaatcaacctgtggtcactcaagtcaatcagtctccttacaatggtgaaattgaacattgtatgcaagcaactgcctacattactggaaaaaatgtgaactatccattacattgtattgcttggaaacagagatacattgtaacttatggccacattgcagaggttcttccacatattgactgtccacaactctggtacaaaggaaatttgtttgaaattgaagaggcggaaatgtcctatttgtctagcaatggtggaccaatggaccttctgctaattcatcttccaaagtttccaattcagttcaaggatattaccaaatacatttccaatggaat
| 2 | 5 | 0.6 | 0 | 407 |
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] |
95 | 7,066 | 408 |
NC_034453.1
|
Mustela putorius furo
|
Ferret parechovirus
|
Parechovirus D
|
feces
|
Picornaviridae
|
Parechovirus
|
ssRNA(+)
|
NC_034453.1 |Ferret parechovirus isolate MpPeV1 polyprotein gene, complete cds|GCF_002118445.1|Ferret parechovirus||2017-05-05T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Smits,S.L., Raj,V.S., Oduber,M.D., Schapendonk,C.M., Bodewes,R., Provacia,L., Stittelaar,K.J., Osterhaus,A.D., Haagmans,B.L., Raj,S.V., Oduber,M., Schapendonk,C.M.E., Osterhaus,A.D.M.E.|MpPeV1|Parechovirus D|Parechovirus|complete|Picornaviridae|ssRNA(+)|7066|RefSeq|||1|Netherlands|Netherlands||Mustela putorius furo|feces|||PRJNA485481
|
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| 3 | 5 | 0.8 | 0 | 408 |
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] |
97 | 1,767 | 409 |
PP179115.1
|
Sus scrofa
|
Porcine circovirus 2
|
Circovirus porcine2
|
Circoviridae
|
Circovirus
|
ssDNA(+/-)
|
PP179115.1 |Porcine circovirus 2 isolate PCV2-HeB-24-2, complete genome||Porcine circovirus 2||2024-02-03T00:00:00Z|Harbin Veterinary Research Institute, Caas|China|Huang,L., Cao,M.|PCV2-HeB-24-2|Circovirus porcine2|Circovirus|complete|Circoviridae|ssDNA(+/-)|1767|GenBank||||China: Heibei|China||Sus scrofa||2023||
|
accagcgcacttcggcagcggcagcacctcggcagcacctcagcagcaacatgcccagcaaaaagaatggaagaagcggaccccaaccacataaaaggtgggtgttcacgctgaataatccttccgaggacgagcgcaagaaaatacgggagcttccaatctccctttttgattattttattgttggcgaggagggtaatgaggaaggacgaacaccccacctccaggggttcgctaattttgtgaagaagcaaacatttaataaagtgaaatggtatctcggtgcccgctgccacatcgagaaagcgaaaggaactgatcagcagaataaagaatattgcagtaaagaaggcaacttactgattgaatgtggagctcctagatctcaaggacaacggagtgacctgtctactgctgtgagtaccttgctggagagcgggagtctggtgaccgttgcagagcagcaccctgtaacgtttgtcagaaatttccgcgggctggctgaacttttgaaagtgagcgggaaaatgcagaagcgtgattggaagacgaatgtacacgtcattgtggggccacctgggtgtggcaaaagcaaatgggctgctaattttgcagacccggaaaccacatactggaaaccacctagaaacaagtggtgggatggttaccatggtgaagaagtggttgttattgatgacttttatggctggctgccgtgggatgatctactgagactgtgtgatcgatatcctttgactgttgagactaaaggtggaactgtaccttttttggcccgcagtattctgattaccagcaatcagaccccgttggaatggtactcctcaactgctgtcccagctgtagaagctctctatcggaggattacttccttggtattttggaagaatgctacagaacaatccacggaggaagggggccagttcgtcaccctttcccccccatgccctgaatttccatatgaaataaattactgaagactttttatcacttcgtaatggtttttattattcacatagggttaagtggggggtctttaagattaaattctctgaattgtacatacagggttatacggatattgtagtcctggtcgtatatactgttttcgaacgcagtgccgaggcctacatggtctacatttccagtagtttgtagtctcagccagatttgatttcttttgttattgggttggaagtaatcgattgtcctatcaaggacaggtttcggggtaaagtaccgggagtggtaggagaagggctgggttatggtatggcgggaggagtagtttacataggggtcataggttagggcattggcctttgttacaaagttatcatctagaataacagcagtggagcccactcccctgtcaccctgggtgattggggagcagggccagaattcaaccttaaccttccttattctgtagtattcaaagggcacagtgagggggtttgagccccctcctggtggaagaaaatcattaatattaaatctcatcatgtccacattccaggagggcgttctgactgtggttttcttgacagtataacctatggtgcgggagaggcgggtgttgaagatgccatttttccttctccagcggtaacggtggcgggggtggacgagccaggggcggcggcggaggatctggccaagatggctgcgggggcggtgtcttcgtctgcggaaacgcctccttggatacgtcatcgctgaaaacgaaagaagtgcgctgtaagtatt
| 0 | 2 | 0.5 | 0 | 409 |
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|
98 | 8,906 | 410 |
MT744336.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MT744336.1 |HIV-1 isolate C02.01_20170225CADPac9 from USA, complete genome||Human immunodeficiency virus 1||2021-06-29T00:00:00Z|National Cancer Institute, HIV Dynamics and Replication Program|USA|Halvas,E.K., Joseph,K.W., Brandt,L.D., Guo,S., Sobolewski,M.D., Jacobs,J.L., Tumiotto,C., Bui,J.K., Cyktor,J.C., Keele,B.F., Morse,G.D., Bale,M.J., Shao,W., Kearney,M.F., Coffin,J.M., Rausch,J.W., Wu,X., Hughes,S.H., Mellors,J.W., Halvas,E., Joseph,K., Brandt,L., Sobolewski,M., Jacobs,J., Bui,J., Cyktor,J., Keele,B., Morse,G., Bale,M., Kearney,M., Coffin,J., Rausch,J., Hughes,S., Mellors,J.|C02.01_20170225CADPac9|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|8906|GenBank|||1|USA|USA||Homo sapiens||2014-09-24||
|
gcggaggctagaaggagagagatgggtgcgagagcgtcagtattaagcgggggagaattagatagatgggaaaaaattcggttaaggccagggggaaagaaaaaatataaattaaaacatatagtatgggcaagcagggagctagaacgattcgcagtcaatcctggcctgttagaaacatcagaaggctgtagacaaatactgggacagctacacccatcccttcagacaggatcagaggaacttaaatcattatttaatacagtagcagtcctctattgtgtacatcaaaggatagaggtaaaagacaccaaggaggctttagagaaaatagaggaagagcaaaacaaaagtaagaaaaagacacagcaagcagcagctgacacaggaaatagcagtcaggtcagccaaaattaccctatagtgcagaacctccaggggcaaatggtacatcaggccatatcacctagaactttaaatgcatgggtaaaagtagtagaagagaaggctttcagcccagaggtaatacccatgttttcagcattatcagaaggagccaccccacaagatttaaacaccatgttaaacacagtggggggacatcaagcagccatgcaaatgttaaaagagaccatcaatgaggaagctgcagaatgggatagagtgcatccagtgcatgcagggcctattgcaccaggccagatgagagaaccaaggggaagtgacatagcaggaactactagtacccttcaggaacaaataggatggatgacaaataatccacctatcccagtaggagaaatctataaaagatggataatcctgggattaaataaaatagtaaggatgtatagccctaccagcattctggacataagacaaggacccaaggaaccctttagagactatgtagatcggttctataaaactctaagagccgagcaagcttcacaggaggtaaaaaattggatgacagaaaccttgttggtccagaatgcgaacccagattgtaagactattttaaaagcattggggccagcagctacactagaagaaatgatgacagcatgtcagggagtgggaggacccggtcacaaagcaagggtattggcggaagcaatgagccaagtaacaaatccagctaccataatgatgcagaaaggcaattttagaagccaaagaaagattgttaagtgtttcaattgtggcaaggaagggcatatagccaaaaattgtagggcccctaggaaaaagggctgttggaaatgtggaaaggaaggacaccaaatgagagattgtactgaaagacaggctaattttttagggaagatctggccttcctacaaggggaggccagggaattttcttcagagcagaccagagccaacagccccaccagccccaccagaggagagcttcaggtttggggaggagacaacaactccctctcagaagcaggagccgatagacaaggaactgtatcctttagcttccctcagatcactctttggcaacgacccctcgtcacaataaagataggggggcaactaaaggaagctctattagatacaggagcagatgatacagtattagaagaaatgaatttaccagggagatggaaaccaaaaatgatagggggaattggaggttttatcaaagtaagacagtatgatcagatactcatagaaatctgtggacataaagctataggtacagtattagtaggacctacacctgtcaacataattggaagaaatctgttgactcagattggttgcactttaaattttcccattagtcctattgaaactgtaccagtaaaattgaagccaggaatggatggcccaaaagttaaacaatggccattgacagaagaaaaaataaaagcattagtagaaatctgtacagaaatggaaaaggaagggaaaatttcaaaaattgggcctgagaatccatacaatactccagtatttgccataaagaaaaaaaacagtactagatggagaaaattagtagatttcagagaacttaataagaaaactcaagac
| 0 | 6 | 0.2 | 0 | 410 |
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|
98 | 8,906 | 411 |
MT744336.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MT744336.1 |HIV-1 isolate C02.01_20170225CADPac9 from USA, complete genome||Human immunodeficiency virus 1||2021-06-29T00:00:00Z|National Cancer Institute, HIV Dynamics and Replication Program|USA|Halvas,E.K., Joseph,K.W., Brandt,L.D., Guo,S., Sobolewski,M.D., Jacobs,J.L., Tumiotto,C., Bui,J.K., Cyktor,J.C., Keele,B.F., Morse,G.D., Bale,M.J., Shao,W., Kearney,M.F., Coffin,J.M., Rausch,J.W., Wu,X., Hughes,S.H., Mellors,J.W., Halvas,E., Joseph,K., Brandt,L., Sobolewski,M., Jacobs,J., Bui,J., Cyktor,J., Keele,B., Morse,G., Bale,M., Kearney,M., Coffin,J., Rausch,J., Hughes,S., Mellors,J.|C02.01_20170225CADPac9|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|8906|GenBank|||1|USA|USA||Homo sapiens||2014-09-24||
|
ttttatcaaagtaagacagtatgatcagatactcatagaaatctgtggacataaagctataggtacagtattagtaggacctacacctgtcaacataattggaagaaatctgttgactcagattggttgcactttaaattttcccattagtcctattgaaactgtaccagtaaaattgaagccaggaatggatggcccaaaagttaaacaatggccattgacagaagaaaaaataaaagcattagtagaaatctgtacagaaatggaaaaggaagggaaaatttcaaaaattgggcctgagaatccatacaatactccagtatttgccataaagaaaaaaaacagtactagatggagaaaattagtagatttcagagaacttaataagaaaactcaagacttctgggaagttcaattaggaataccacatcctgcagggttagaaaagaaaaattcagttacagtactggatgtgggtgatgcatatttttcagttcctttagatgaagacttcaggaagtacactgcatttactatacctagtataaacaatgagacaccagggatcagatatcagtacaatgtgcttccacagggatggaaaggatcaccagcaatatttcaaagtagcatgacaaaaatcttagagccttttagacaacaaaatccagacatagttatctatcaatacatggatgatttgtatgtaggatctgacttagaaatagggcagcatagaacaaaaatagaggaactgagacaacatctgttgaagtggggatttaccacaccagacaaaaagcatcagaaagaacctccattcctttggatgggttatgaactccatcctgataaatggacagtacagcctatagtgctgccagaaaaagacagctggaccgtcaatgacatacagaagctagtgggaaaattgaattgggcaagtcagatttacccagggatcaaagtaaaacaattatgtagactccttaggggaaccaaggcactaacagaagtagtaccactaacaaaagaagcagaactagaattggaagagaatagggaaattctaaaagaaccagtacatggagtgtattatgacccgtcaaaagacttaatagcagaaatacagaagcaggggcaaggccaatggacatatcaaatttatcaagagccatttaagaatctgaaaacaggaaaatatgcaagaatgaggggtgcccacactaatgatgtaaaacaattaacagaggtagtgcaaaaaataaccacagaaagcatagtgatatggggaaagactcctaaatttagactgcccatacaaaaagaaacatgggagacatggtggacagagtattggcaagccacctggattcctgagtgggagtttgtcaatacccctcccttagtaaaattatggtaccagttagagaaagaacccataataggagcagaaactttctatgtagatggggcagctaacagggagactaaattaggaaaagcaggatatgttactaacagaggaagacaaaaggttgtctccctaactgacacaacaaatcagaagactgagttacaagcaattcatctagctttacaggattcaggattagaagtaaacatagtaacagactcacagtatgcattgggaattattcaagcacagccagataaaagtgaatcagagttagtcagtcaaataatagaacagttaataaaaaaggaaaaggtctacttggcatgggtaccagcgcacaaaggaattggaggaaatgaacaagtagataaattagtcagttctggaatcaggaaagtactatttttagatggaatagataaagcccaagaagaacatgagaaatatcacagtaattggagagcaatggctagtgattttaacctgccacctgtggtagcaaaagaaatagtagccagctgtgataaatgtcagctaaaaggagaagccatgcatggacaggtagactgtagtccaggaatatggcaactagattgtacacatttagaaggaaaaattatcctggtag
| 1 | 6 | 0.3 | 0 | 411 |
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] |
|
98 | 8,906 | 412 |
MT744336.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MT744336.1 |HIV-1 isolate C02.01_20170225CADPac9 from USA, complete genome||Human immunodeficiency virus 1||2021-06-29T00:00:00Z|National Cancer Institute, HIV Dynamics and Replication Program|USA|Halvas,E.K., Joseph,K.W., Brandt,L.D., Guo,S., Sobolewski,M.D., Jacobs,J.L., Tumiotto,C., Bui,J.K., Cyktor,J.C., Keele,B.F., Morse,G.D., Bale,M.J., Shao,W., Kearney,M.F., Coffin,J.M., Rausch,J.W., Wu,X., Hughes,S.H., Mellors,J.W., Halvas,E., Joseph,K., Brandt,L., Sobolewski,M., Jacobs,J., Bui,J., Cyktor,J., Keele,B., Morse,G., Bale,M., Kearney,M., Coffin,J., Rausch,J., Hughes,S., Mellors,J.|C02.01_20170225CADPac9|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|8906|GenBank|||1|USA|USA||Homo sapiens||2014-09-24||
|
ttgggaattattcaagcacagccagataaaagtgaatcagagttagtcagtcaaataatagaacagttaataaaaaaggaaaaggtctacttggcatgggtaccagcgcacaaaggaattggaggaaatgaacaagtagataaattagtcagttctggaatcaggaaagtactatttttagatggaatagataaagcccaagaagaacatgagaaatatcacagtaattggagagcaatggctagtgattttaacctgccacctgtggtagcaaaagaaatagtagccagctgtgataaatgtcagctaaaaggagaagccatgcatggacaggtagactgtagtccaggaatatggcaactagattgtacacatttagaaggaaaaattatcctggtagcagttcatgtagccagtggatatatagaagcagaagttattccagcagaaacagggcaggaaacagcatacttcctcttaaaattagcaggaagatggccagtaaaaacaatacatacagacaatggcagcaatttcaccagtactacagttaaggccgcctgttggtgggcagggatcaagcaggaatttggcattccctacaatccccaaagtcaaggagtagtagaatctatgaataaagaattaaagaaaattataggacaggtaagagatcaggctgaacatcttaagacagcagtacaaatggcagtattcatccacaattttaaaagaagaggggggattggggggtacagtgcaggggaaagaataatagacataatagcaacagacatacaaactaaagaattacaaaaacaaattacaaaaattcaaaattttcgggtttattacagggacagcagagatccactttggaaaggaccagcaaagcttctctggaaaggtgaaggggcagtagtaatacaagataatagtgacataaaagtagtgccaagaagaaaagtaaagatcattaaggattatggaaaacagatggcaggtgatgattgtgtggcaagtagacaggatgaggattaaaacatggaaaagtttagtaaaacaccatatgtatatttcagggaaagctaagagatggttttatagacatcactatgaaagtacccatccaagaataagttcagaagtacacatcccactaggggatgcggaattggtagtaacaacatattggggtctacatacaggagaaagagactggcatttgggtcagggagtctccatagagtggaggaaaaagagatatagcacacaagtagaccctaacctagcagaccaactaattcatctgtattactttgattgtttttcagaatctgctataagaaaagccatattaggacatatagttagtcctagttgtgaatatcaagcaggacataacaaggtaggatctctacagtacttggcactagcagcattaataacaccaaaaaggagaaagccacctttgcctagtgttacaaaactgacagaggatagatggaacaagccccagaagaccaagggccacaaagggagccatacaatgaatgggcactagagcttttagaggagcttaagaatgaagctgttagacattttcctaggatatggctccatggcctaggacaacatatctatgaaacttatggggatacttgggcaggagtggaagccctaataagaattctgcaacaactgctgtttattcatttcagaattgggtgccgacatagcagaataggcattattcgacagaggagaggaagaaatggagccagtagatcctagactagagccctggaagcacccaggaagtcagcctaaaactgcttgtaccacttgctattgtaaaaagtgttgctttcattgccaagtttgtttcataacaaaaggcttaggcatctcctatggcaggaagaagcggagacagcgacgaagagctcctcaagacagtcagattgatcaagtttctctatcaaagcagtaagtagcacatgtaatgcaacctttacaaatagcagcaatagtagcattagtagtag
| 2 | 6 | 0.5 | 0 | 412 |
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] |
|
98 | 8,906 | 413 |
MT744336.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MT744336.1 |HIV-1 isolate C02.01_20170225CADPac9 from USA, complete genome||Human immunodeficiency virus 1||2021-06-29T00:00:00Z|National Cancer Institute, HIV Dynamics and Replication Program|USA|Halvas,E.K., Joseph,K.W., Brandt,L.D., Guo,S., Sobolewski,M.D., Jacobs,J.L., Tumiotto,C., Bui,J.K., Cyktor,J.C., Keele,B.F., Morse,G.D., Bale,M.J., Shao,W., Kearney,M.F., Coffin,J.M., Rausch,J.W., Wu,X., Hughes,S.H., Mellors,J.W., Halvas,E., Joseph,K., Brandt,L., Sobolewski,M., Jacobs,J., Bui,J., Cyktor,J., Keele,B., Morse,G., Bale,M., Kearney,M., Coffin,J., Rausch,J., Hughes,S., Mellors,J.|C02.01_20170225CADPac9|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|8906|GenBank|||1|USA|USA||Homo sapiens||2014-09-24||
|
cttatggggatacttgggcaggagtggaagccctaataagaattctgcaacaactgctgtttattcatttcagaattgggtgccgacatagcagaataggcattattcgacagaggagaggaagaaatggagccagtagatcctagactagagccctggaagcacccaggaagtcagcctaaaactgcttgtaccacttgctattgtaaaaagtgttgctttcattgccaagtttgtttcataacaaaaggcttaggcatctcctatggcaggaagaagcggagacagcgacgaagagctcctcaagacagtcagattgatcaagtttctctatcaaagcagtaagtagcacatgtaatgcaacctttacaaatagcagcaatagtagcattagtagtagcagcaataatagcaatagttgtgtggtccatagtatttatagaatataggaaaatattaaggcaaagaaaaatagactggttacttgagagaataagtgaaagagcagaagacagtggcaatgagagtgatggggatcaggaagagttatcagcacttgtggagatggggcaccatgctccttgggttgttaatgatctgtaatgctgaagaagcatgggtcacagtctattatggggtacctgtgtggaaagaagcaaccaccactctattttgtgcatcagatgctaaagcatataatacagaagtacataatgtttgggccacacatgcctgtgtacccacagaccccaacccacaagaagtattgctcaatgtgacagaaaaatttaacatatggaaaaataacatggtagaccagatgcatgaggatataatcagtttatgggatcaaagcctaaagccatgtgtaaaattaaccccactttgtgtcactttaaattgcactgattatgagaagaatgttactaatatcaatgctactgctaccaatggtactaatgccacgagtaatgacactgggggtaataccaatagtagtagcgaaggaaggatggagaaaggagaaataaaatattgctctttcaatgtcacctcaggcataagagataaggtgaagaaagaatatgcatatttttataaacttgatgtagtaccaatagataatgataatactagttataggttgataagttgtaacacctcagtcattacacaggcctgtccaaaggtatcctttgagccaattcccatacattattgtgccccggctggttttgcgattctaaagtgtaacgataaggggttcaatggaacagaaacatgtaaaaatgtcagcgtagtacaatgtacacatggaattaggccagtagtatcaactcaactgctgttaaatggcagcctagcagaagaagagatagtaattagatctgaaaatttctcgaacaatgctaaaaccataatagtacagctgaatgaaactgtagaaattaattgtacaagacccaacaacaatacaagaagaagtatatctataggaccaggcagagcattttttgcaacaggagaagtaataggagatataagacaagcacattgtaacattagtggagcaaaatggaatgtcactttaaaacggatagctataaaattaaaagaacaatataataaaacaatagtctttgatcaaccctcaggaggggacccagaaataataatgcacagttttaattgtggaggggaatttttctactgtaatacaacaaaactgtttaatagagagtggaatgagagtgttactgaagagtcaaatggcaccataggaaatgacacaatcacactcccatgcagaataaaacaaattataaacatgtggcaggaagtaggaaaagcaatgtatgcccctcccatcagaggacaaattagatgttcatcaaatattacaggactgttattaacaagagatggtggtgagaacaacaggaccaacgagaccttcagacctgtaggaggagatatgagggacaattggagaagtgaattatataaatacaaagtagtaaaagttgaacccttaggagtagcaccca
| 3 | 6 | 0.7 | 0 | 413 |
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|
98 | 8,906 | 414 |
MT744336.1
|
Homo sapiens
|
Human immunodeficiency virus 1
|
Human immunodeficiency virus 1
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
MT744336.1 |HIV-1 isolate C02.01_20170225CADPac9 from USA, complete genome||Human immunodeficiency virus 1||2021-06-29T00:00:00Z|National Cancer Institute, HIV Dynamics and Replication Program|USA|Halvas,E.K., Joseph,K.W., Brandt,L.D., Guo,S., Sobolewski,M.D., Jacobs,J.L., Tumiotto,C., Bui,J.K., Cyktor,J.C., Keele,B.F., Morse,G.D., Bale,M.J., Shao,W., Kearney,M.F., Coffin,J.M., Rausch,J.W., Wu,X., Hughes,S.H., Mellors,J.W., Halvas,E., Joseph,K., Brandt,L., Sobolewski,M., Jacobs,J., Bui,J., Cyktor,J., Keele,B., Morse,G., Bale,M., Kearney,M., Coffin,J., Rausch,J., Hughes,S., Mellors,J.|C02.01_20170225CADPac9|Human immunodeficiency virus 1|Lentivirus|complete|Retroviridae|ssRNA-RT|8906|GenBank|||1|USA|USA||Homo sapiens||2014-09-24||
|
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| 4 | 6 | 0.8 | 0 | 414 |
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|
99 | 7,387 | 415 |
KJ170564.1
|
Homo sapiens
|
Human poliovirus 2
|
Enterovirus C
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
KJ170564.1 |Human poliovirus 2 strain NIE1118433, complete genome|set:KJ170564|Human poliovirus 2||2015-01-31T00:00:00Z|Centers for Disease Control and Prevention, NCIRD/DVD/PPLB|USA|Famulare,M., Chang,S., Iber,J., Zhao,K., Adeniji,J.A., Bukbuk,D., Baba,M., Behrend,M., Burns,C.C., Oberste,M.S., Adeniji,A.||Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7387|GenBank|type 2||1|Nigeria|Nigeria||Homo sapiens||2011||
|
cagaggcccacgtggcggctagcactccggtattacggtacccttgtgcgcctgttttatactcccctcccgcaacttagaagcacgaaaccaagttcaatagaagggggtacaaaccagtaccaccacgaacaagcacttctgtttccccggtgacattgcatagactgctcacgcggttgaaagtgatcgatccgttacccgcttgtgtacttcgaaaagcctagtatcgccttggaatcttcgacgcgttgcgctcagcacccgaccccggggtgtagcttaggctgatgagtctggacattcctcaccggtgacggtggtccaggctgcgttggcggcctacctatggctaacgccataggacgctagatgtgaacaaggtgtgaagagcctattgagctacataagagtcctccggcccctgaatgcggctaatcctaaccacggagcaggcggtcgcgaaccagtgactggcttgtcgtaacgcgcaagtctgtggcggaaccgactactttgggtgtccgtgtttcctgttatttttatcatggctgcttatggtgacaatcagagattgttatcataaagcgaattggattggccatccggtgagtgttgtgtcaggtatacaactgtttgttggaaccactgtgttagctttacttctcatttaaccaattaatcaaaaacaatacgaggataaaacaacaatactacaatgggcgcccaagtttcatcacagaaagttggagcccacgaaaattcaaacagagcctatggcgggtccaccatcaattacactacaatcaattactatagggactctgcaagcaatgcagcaagcaagcaagattttgcacaagatccgtccaagttcaccgaacccattaaggacgtccttattaagaccgctcccatgctaaactccccaaacattgaggcgtgtggttatagtgacagggtaatgcagctaactctgggcaattcaacgatcaccacccaagaagcggccaattctgttgttgcctacggtagatggcctgaatacatcagagataccgaggcaaatcctgtagaccaaccaaccgagcccgatgtagccgcgtgcaggttctacacattagataccgtcacttggcgcaaggagtccagagggtggtggtggaaactaccagacgctttaaaagacatggggttatttggtcaaaacatgttttatcactatcttgggagggctggctacacagtgcacgtacagtgcaatgcttcaaagttccatcaaggagctctaggggtgtttgcagttccagaaatgtgtttagctggtgatagcacaactcacatgttcacaaagtacgagaatgcgaatccaggcgaaaaaggaggtgaattcaaagggagtttcacccttgataccaacgccactaaccctgcacggaacttctgcccagttgattacctcttcgggagtggagtgctggtagggaatgcatttgtttatccacatcaaataataaacctgcgcactaacaactgtgctacgctagtattgccctatgtaaactcactctcaatagatagcatgacaaagcacaacaactgggggatcgctatcctccccctggcgccactagactttgccactgaatcttccactgagatacccattacactgaccattgctcccatgtgctgcgaattcaatggtttacgcaacatcactgtgccaagaacccaaggattaccagtcctgaacactccagggagtaaccagtacctgaccgcagacaattaccagtctccgtgtgcgatacctgagtttgatgtcactccacccatagacataccaggggaggtgcgcaacatgatggaattggcggaaatagacaccatgatacccctcaacttgacaagtcaacgcaagaacacaatggacatgtatagagtcgagttgagcgacacggctcactctgacacgccgatcttgtgtctctcgttgtcccccgcttcagaccccagattggcacacactatgttgggtgagatat
| 0 | 5 | 0.2 | 0 | 415 |
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|
99 | 7,387 | 416 |
KJ170564.1
|
Homo sapiens
|
Human poliovirus 2
|
Enterovirus C
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
KJ170564.1 |Human poliovirus 2 strain NIE1118433, complete genome|set:KJ170564|Human poliovirus 2||2015-01-31T00:00:00Z|Centers for Disease Control and Prevention, NCIRD/DVD/PPLB|USA|Famulare,M., Chang,S., Iber,J., Zhao,K., Adeniji,J.A., Bukbuk,D., Baba,M., Behrend,M., Burns,C.C., Oberste,M.S., Adeniji,A.||Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7387|GenBank|type 2||1|Nigeria|Nigeria||Homo sapiens||2011||
|
tcttccactgagatacccattacactgaccattgctcccatgtgctgcgaattcaatggtttacgcaacatcactgtgccaagaacccaaggattaccagtcctgaacactccagggagtaaccagtacctgaccgcagacaattaccagtctccgtgtgcgatacctgagtttgatgtcactccacccatagacataccaggggaggtgcgcaacatgatggaattggcggaaatagacaccatgatacccctcaacttgacaagtcaacgcaagaacacaatggacatgtatagagtcgagttgagcgacacggctcactctgacacgccgatcttgtgtctctcgttgtcccccgcttcagaccccagattggcacacactatgttgggtgagatattaaattactacacacactgggcagggtccttgaaatttacctttctcttttgcggctcaatgatggccaccggaaagttattggtttcttacgcaccacccggagcagaggcccccaagagtcgcaaagaagcaatgcttgggacacatgtgatatgggacattgggttgcagtcttcatgcactatggtggtaccttggatcagtaataccacatacagacaaaccatcaacgatagtttcacagaaggtggctacattagcatgttctatcaaactagggttgttgtcccgttgtccacacccagaaagatggacatcctgggttttgtgtcagcttgcaatgacttcagtgtgcgcttactgcgagatacaacacacattagtcaagaggctatgccacaaggaattggtgacatgattgagggggccgttgaagggattactaaaaatgcattggttcccccgacttccaccaatagcctgcctgacacaaagccgagcggtccagcccactccaaggagatacctgcattgacagccgtggagacaggggctaccaatccgttggtgccttcggacaccgtgcaaacgcgccatgtcatccagagacgaacgcgatcagagtccacggttgagtcattctttgcaagaggggcttgcgtggctatcattgaggtggacaatgatgcaccgacaaagcgcgccagcagattgttttcggtttggaaaataacttacaaagatactgttcaactgagacgcaaactggaatttttcacatattcgagatttgacatggagttcacttttgtggtcacctcaaactacactgatgcaaataacggacatgcattgaaccaagtttatcagataatgtatataccacccggagcacctatccctggtaaatggaatgactatacgtggcagacgtcctctaacccgtcggtgttttacacctatggggcgcccccagcaagaatatcagtgccctacgtgggaattgctaatgcgtattcccacttttatgatgggtttgcaaaagtaccactagcgggtcaagcctcaactgaaggcgattcgttgtacggtgctgcctcactgaatgattttggatcactggctgttcgcgtggtaaatgatcacaaccccacgcggctcacctccaagatcagagtgtacatgaagccaaagcatgtcagagtctggtgcccacgacctccacgagcagtcccatacttcggaccaggtgttgattataaagatgggctcaccccactaccagaaaagggattaacgacttatggatttggacaccaaaacaaagctgtgtacacagctggctacaaaatttgcaattaccacctagctacacaagaagacttgcaaaatgccgtgagtgtcatgtggaacagagacctcttagtggctgaatcaagggcccttggcaccgactcgatcgcaaggtgcagctgtaacacgggtgtgtactactgtgaatccaggagaaaatattatccagtttctttcattgggcccaccttccaatacatggaagccaatgaatattacccggctagatatcaatcacacatgcttattggtcatgggtttgcatcaccgggtgattgtggtggcatacttag
| 1 | 5 | 0.4 | 0 | 416 |
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] |
|
99 | 7,387 | 417 |
KJ170564.1
|
Homo sapiens
|
Human poliovirus 2
|
Enterovirus C
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
KJ170564.1 |Human poliovirus 2 strain NIE1118433, complete genome|set:KJ170564|Human poliovirus 2||2015-01-31T00:00:00Z|Centers for Disease Control and Prevention, NCIRD/DVD/PPLB|USA|Famulare,M., Chang,S., Iber,J., Zhao,K., Adeniji,J.A., Bukbuk,D., Baba,M., Behrend,M., Burns,C.C., Oberste,M.S., Adeniji,A.||Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7387|GenBank|type 2||1|Nigeria|Nigeria||Homo sapiens||2011||
|
caggtgttgattataaagatgggctcaccccactaccagaaaagggattaacgacttatggatttggacaccaaaacaaagctgtgtacacagctggctacaaaatttgcaattaccacctagctacacaagaagacttgcaaaatgccgtgagtgtcatgtggaacagagacctcttagtggctgaatcaagggcccttggcaccgactcgatcgcaaggtgcagctgtaacacgggtgtgtactactgtgaatccaggagaaaatattatccagtttctttcattgggcccaccttccaatacatggaagccaatgaatattacccggctagatatcaatcacacatgcttattggtcatgggtttgcatcaccgggtgattgtggtggcatacttagatgtcaacacggggtgataggaataatcactgctggtggggaaggcttggttgcattttcagacattagagacctgtatgcttatgaggaggaagctatggagcagggcatttccaactatattgagtcacttggtgctgcatttggtagtggattcactcaacaaattggtgataaagtttccgagctaaccagcatggtaactagcaccattacagagaagttgcttaaaaacttaatcaaaattatctcatcacttgtgatcattaccaggaattatgaggacactaccacagtgcttgccaccctcgccctccttgggtgcgacatctcaccgtggcagtggctaaagaagaaggcatgtgacatcctggaaattccatacgccatcaaacaaggagatagttggttgaagaaattcactgaggcatgtaatgctgcaaagggactggagtgggtgtccaataagatatccaaattcattagttggttgcaggataaaatcatcccacaagcgagagacaaattagagtttgtcactaaactaaagcaattagaaatgcttgaaaatcagatttccaccatacaccaatcttgtccaagtcaagaacatcaggagatcttattcaacaatgtgcggtggctatctatccagtccaagaggtttgcaccactatatgcacatgaagctaaaaggattcaaaagctggagcataccataaataattacgtacagttcaagagcaagcaccgtattgagccagtatgtttgttagtacatggcagtccagggacaggaaaatcagttgcaaccaatctaattgctagagcaatagccgagaaagagaacacctccacatactcactgccacctgatccgtctcactttgatggctacaagcaacagggtgtggttattatggatgacctaaaccaaaatccagacggagcagacatgaaacttttttgtcaaatggtgtccactgtggagtttattccaccgatggcctcgctagaagagaaaggcattttgttcacatctaattacgttttagcctccaccaactccagtcggatcacaccacccacggtggctcacagtgatgcgctggccaggagattcgcatttgacgtggacatacaagtcatgagcgagtactccagagacggaaagctcaacatggcaatggctactgaaatgtgcaaaaactgtcatcaaccagcaaacttcaaaagatgttgtcctttagtgtgtggcaaggcaattcagttaatggataaatcttccagggttagatacagcattgatcagatcactacaatgattgttaatgagagaaacagaagatcaaacattggtaattgcatggaagctctattccagggaccactgcagtataaagatctaaaaatagatgttaagaccagtccccctccggagtgtatcaacgatttgctccaggcagttgattcccaggaagtgagagattactgtgaaaagaaaggctggattgttaacattaccagtcaggttcaaacagagaggaacatcaaccgggcgatgactatcctacaagcagtaactactttcgctgcagtagccggtgtcgtgtacgttatgtacaagctgttcgctgggcaccagggt
| 2 | 5 | 0.6 | 0 | 417 |
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] |
|
99 | 7,387 | 418 |
KJ170564.1
|
Homo sapiens
|
Human poliovirus 2
|
Enterovirus C
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
KJ170564.1 |Human poliovirus 2 strain NIE1118433, complete genome|set:KJ170564|Human poliovirus 2||2015-01-31T00:00:00Z|Centers for Disease Control and Prevention, NCIRD/DVD/PPLB|USA|Famulare,M., Chang,S., Iber,J., Zhao,K., Adeniji,J.A., Bukbuk,D., Baba,M., Behrend,M., Burns,C.C., Oberste,M.S., Adeniji,A.||Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7387|GenBank|type 2||1|Nigeria|Nigeria||Homo sapiens||2011||
|
agtgtgtggcaaggcaattcagttaatggataaatcttccagggttagatacagcattgatcagatcactacaatgattgttaatgagagaaacagaagatcaaacattggtaattgcatggaagctctattccagggaccactgcagtataaagatctaaaaatagatgttaagaccagtccccctccggagtgtatcaacgatttgctccaggcagttgattcccaggaagtgagagattactgtgaaaagaaaggctggattgttaacattaccagtcaggttcaaacagagaggaacatcaaccgggcgatgactatcctacaagcagtaactactttcgctgcagtagccggtgtcgtgtacgttatgtacaagctgttcgctgggcaccagggtgcatacactggtttgccaaataaacgacccaatgtacccactatcaggacagcaaaagtgcaaggccctgggtttgattacgcagtggccatggctaaaagaaacattgttacagcaaccaccagcaaaggggagtttacgatgttgggagtctatgataatgtggccatcttgccaacccacgcctcacctggtgaaagcattgcgatcgacggtaaagaggtggaaattcttgacgccaaagcccttgaagatcaggcaggaactaatcttgaaattaccataattacactaaagaggaacgagaagttcagagatatcaggccacacattcccacccaaatcaccgaaacaaatgatggagttttgatcgtgaacactagtaagtaccccaacatgtatgttcccgttggtgctgtgaccgaacaggggtatcttaatctcggtggacgacaaaccgctcgtacgctaatgtacaactttccaactagagcaggtcagtgtggtggtgtcatcacgtgcactggtaaagtcattgggatgcatgttggtgggaacggttcacatgggttcgcggcggccctaaagcggtcatacttcactcagattcaaggtgagattcaatggatgaaaccatcaaaagaagtgggatacccgatcataaatgctccgtccaaaaccaaacttgaacccagcgcttttcactatgtgtttgaaggggtgaaggaaccagcagtccttaccaaaaatgatcccaggctcaggacagactttgaagaagcaatattctctaagtatgtaggcaacaagatcactgatgtggatgagtacatgaaagaggcagtggatcattacgctggccaactcatgtctctagacatcaacacagaacaaatgtgcttggaggacgccatgtacggcaccgatggcctggaagcacttgacttgaccactagtgctggatacccttatgtagcaatgggaaagaaaaagagagacatcttgaataagcagactagagacaccaaggaaatgcggagactcttagatacttatggaattaacttaccgcttgtaacatatgttaaagatgaactaaggtcaaaaactaaggtggagcagggaaaatccagattgattgaagcctccagtttgaatgattcagtggccatgagaatggcatttggaaatctctatgcagcatttcacaaaaacccaggagttgtcactggcagtgcagttggttgtgatccagatctattttggagcaagatcccagtgctaatggaagagaagctctttgcttttgactacacaggttatgatgcatcactcagcccggcctggtttgaggcactcaaaatggtgctagagaaaatcggatttggggacagggtggattatattgattacctcaaccattcccaccacctgtacaaaaacaaaacttattgcgtaaaaggcggcatgccatctggctgctcaggcacatcaatttttaactcaatgattaacaacttaatcattaggacactcctactgaaaacctacaagggcatagatttagatcacctaaagatgattgcctatggtgatgatgtaattgcttcctacccccatgaggttgatgctagtctcctagcccaat
| 3 | 5 | 0.8 | 0 | 418 |
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] |
|
101 | 15,222 | 422 |
PP377358.1
|
Homo sapiens
|
Human respiratory syncytial virus B
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
PP377358.1 |Human respiratory syncytial virus B isolate 810102022, complete genome||Human respiratory syncytial virus B||2024-04-09T00:00:00Z|UMC Utrecht, Paediatric Infectious Diseases|Netherlands|Langedijk,A.C., Lebbink,R.J., Bont,L.J., Evers,A.|810102022|Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15222|GenBank||||Japan|Japan||Homo sapiens||2018-07-25||
|
ttctagaaaaagatgatgatcccgcatcactaacaatatgggtgcctatgttccagtcatctgtgccagcagacttgctcataaaagaacttgcaagcatcaacatactagtaaagcagatctctacacccaaaggaccttcactacgagtcacgatcaactcaagaagtgctgtgctggctcaaatgcctagtaatttcaccataagtgcaaatgtatcattagatgaaagaagcaaattagcatatgatgtaactacaccttgtgaaatcaaagcatgcagtttaacatgcttaaaagtaaaaagtatgttaactacagtcaaagatctaaccatgaagacattcaaccccactcatgagatcattgctctatgtgaatttgaaaatattatgacatcaaaaagagtaataataccaacctatctaagatcaatcagtgtcaaaaacaaggatctgaactcactggaaaatatagcaaccaccgaattcaaaaacgctatcaccaatgctaaaattattccctatgcaggattagtgttagttatcacggttactgataataaaggagcattcaagtatatcaagccacagagtcaatttatagtggatcttggtgcctacctagaaaaagagagcatatattatgtgactactaattggaagcatacagctacacgtttttcaatcaaaccactagaggattaaactcaattatcaacattgaatgacaggttcacatatatcctcaactgcacactatatctaaacatcataaacatctacactacacacttcatcacacaaaccaatcccactcaaaatctaaaatcacttccagccattgtctgccagacctagagtgcgaataggtaaataaaacaagaatatggggtaaatagatatcagttagagttcaaccaatctcaacaaccatctataccgccaatccaatacatacattgcaaatcttaaaatgggaaacacatccatcacaatagaattcacaagcaaattttggccctattttacactaatacatatgatcttaactctaatctctttactaattataatcactattatgattgcaatactaaataagctaagtgaacataaaatattctgcaacaaaactcttgaacaaggacagatgtatcaaatcgacacatagtgttctcccattatgctgtatcaaatcacaatcctgtgtatataaataaacaaattcaatcttctcacagagtcatggcatcacaaaaccatgccaaccatcatggtagcatagagtagttattaaaaaattaacataatgatgaattattagtatgggatcaaaaacaacattggggcaaatgcaacaatgtccaaaaacaagaatcaacgcactgccaggactctagaaaagacctgggatactcttaatcatctaattgtaatatcctcttgtttatacaaattaaatttaaaatctatagcacaaatagcactatcagttttggcaatgataatctcaacctctcttataattgcagccataatattcatcatctctgccaatcacaaagttacactaacaactgtcacagttcaaacaataaaaaaccacactgagaaaaacataaccacttaccttactcaagtctcaccagaaagggttagcccatccaaacaacccacagccacaccaccaatccacacaaactcagccacaatatcacccaatacaaaatcagaaacacaccatacaacaacacaaaccaaaggcacaatctctactccaacacagaacaacaagccaagcacaaaaccacgtccaaaaaatccaccaaaaaaagatgattaccattttgaagtgttcaactttgttccctgtagtatatgtggcaacaatcaactctgcaaatccatttgcaaaacaataccaagcaataaaccaaagaaaaaaccaactacaaaacccacaaacaaaccacctaccaaaaccacaaacaaaagagaccccaaaacactagccaaaacaccgaaaaaagaaaccaccattaacct
| 2 | 10 | 0.3 | 0 | 422 |
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] |
|
101 | 15,222 | 423 |
PP377358.1
|
Homo sapiens
|
Human respiratory syncytial virus B
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
PP377358.1 |Human respiratory syncytial virus B isolate 810102022, complete genome||Human respiratory syncytial virus B||2024-04-09T00:00:00Z|UMC Utrecht, Paediatric Infectious Diseases|Netherlands|Langedijk,A.C., Lebbink,R.J., Bont,L.J., Evers,A.|810102022|Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15222|GenBank||||Japan|Japan||Homo sapiens||2018-07-25||
|
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| 3 | 10 | 0.4 | 0 | 423 |
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] |
|
101 | 15,222 | 425 |
PP377358.1
|
Homo sapiens
|
Human respiratory syncytial virus B
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
PP377358.1 |Human respiratory syncytial virus B isolate 810102022, complete genome||Human respiratory syncytial virus B||2024-04-09T00:00:00Z|UMC Utrecht, Paediatric Infectious Diseases|Netherlands|Langedijk,A.C., Lebbink,R.J., Bont,L.J., Evers,A.|810102022|Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15222|GenBank||||Japan|Japan||Homo sapiens||2018-07-25||
|
tatcatccatattgatctcaagtgaaagcatgattgctacattcaatcataaagacatattacaatttaaccacaaccatttagataaccaccagtgtttattaaatcatatatttgatgaaattcattggacacctaaaaacttattagatgccactcaacaatttctccaacatcttaacatccctgaagatatatatacagtatatatattagtgtcataatgcttgatcataacgattctatatcatccaaccataaaactgtcttaataaagttatgggacaaaatggatcccattattaatggaagctctgctaatgtatatctaactgatagttatctaaaaggtgttatctctttttcagaatgtaatgctttagggagttacctttttaacggcccttatcttaaaaatgattataccaacttaattagtagacaaagcccactaatagagcatatgaatctaaaaaaactaactataacacagtcattaatatctagataccataaaggtgaactgaaattagaagaaccaacttatttccagtcattacttatgacatataaaagcatgtcctcgtctgaacaaattgctacaactaacttacttaaaaaaataatacgaagagctatagaaacaagtgatgtaaaggtgtacgccatcttgaataaactaggactaaaggaaaaggacagagttaagcccaacaacaattcaggtgatgaaaactcagtacttacaaccataattaaagatgatatactctcagctgtggaaaacaatcaatcatatacaaattcagataaaaattactcagtaaatcaaaatatcaatatcaaaacaacactcttaaaaaagttgatgtgttcaatgcaacatcctccatcatggttaatacactggttcaatttatatacaaaattaaataacatattaacacaatatcgatcaaatgaggtaaaaagtcatgggtttatattaatagataatcaaactttgagtggttttcagtttattttaaatcaatatggttgcattgtttatcataaagggctcaaaaaaattacaactactacatacaatcaatttttgacatggaaagacatcagcctcagcagattaaatgtttgcttaattacttggataagtaattgtttaaatacattaaataaaagcttagggttgagatgcggattcaataatgttgtgctatcacaattattcctttacggagattgtatactgaaattatttcataatgaaggcttttacataataaaagaagtagaaggatttattatgtctttaattctaaacataacagaagaagatcaatttaggaaacgattttataatagcatgctaaataacatcacagatgcagctattaaggctcaaaaggatctactatcaagagtgtgtcacactttattagacaagacagtgtctgataatatcataaatggtaaatggataattctattaagtaaatttcttaaattgattaagcttgcaggtgataataatctcaataacttgagtgagctatattttctcttcagaatctttggacatccaatggttgatgaaagacaagcaatggatgctgtaagaattaactgcaatgaaactaagttctatttattaagtagcctaagtacgttgagaggtgctttcatttatagaatcataaaagggtttgtaaatacctacaacagatggcccactttaaggaatgctattgttctacctctaagatggttaaactattataaacttaatacttatccatctctacttgaaatcacagaaaatgatttgattattttatcaggattgcggttctatcgtgagtttcatctgcctaaaaaagtggatcttgaaatgataataaatgacaaagctatttctcctccaaaagatctaatatggactagttttcctagaaattacatgccatcacatatacaaaattatatagaacatgaaaagttgaagttctctgaaagcgacagatcaagaagagtactagagtattact
| 5 | 10 | 0.6 | 0 | 425 |
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] |
|
101 | 15,222 | 427 |
PP377358.1
|
Homo sapiens
|
Human respiratory syncytial virus B
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
PP377358.1 |Human respiratory syncytial virus B isolate 810102022, complete genome||Human respiratory syncytial virus B||2024-04-09T00:00:00Z|UMC Utrecht, Paediatric Infectious Diseases|Netherlands|Langedijk,A.C., Lebbink,R.J., Bont,L.J., Evers,A.|810102022|Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15222|GenBank||||Japan|Japan||Homo sapiens||2018-07-25||
|
actttcttacagaagctatagtacattcagtgtttgtgttgagctattatactggtcacgatctacaagataagctccaggatcttccagatgatagactgaacaaattcttgacttgtgtcatcacatttgataaaaatccaaatgccgagtttgtaacattgatgagggatccacaggctttagggtctgaaaggcaagctaaaattactagtgagattaatagattagcagtaacagaagtcttaagtatagctccaaacaaaatattttctaaaagtgcgcaacactatactaccactgagattgatctaaatgacattatgcaaaatatagaaccaacttaccctcatggattaagagttgtttatgaaagtttacctttttataaagcagaaaaaatagttaatcttatatcaggaacaaaatccataactaatatacttgaaaaaacatcagcgatagatacaactgatattaatagggctactgatatgatgaggaaaaatataaccttacttataaggatacttccactagattgtaacaaagacaaaagagagttattaagtttagaaaatcttagcataactgaattaagcaagtatgtaagagaaagatcttggtcattatccaatatagtaggagtaacatcaccaagtattatgttcacaatggacattaaatatacaactagcactatagccagtggtataattatagaaaaatataatgttaatggtttaactcgtggtgaaagaggacctactaagccatgggtaggttcatctacacaggagaaaaaaacaatgccagtgtacaatagacaagttttaaccaaaaagcaaagagaccaaatagatttattagcaaaattagactgggtatatgcatccatagacaacaaagatgaattcatggaagaactgagtactggaacacttggactgtcatatgaaaaggccaaaaagttgtttccacaatatctaagtgtcaattatttacaccggttaacagtcagtagtagaccatgcgaattccctgcctcaataccagcttatagaacaacaaattatcattttgatactagtcctatcaatcatgtattaacagaaaagtatggagatgaagatatcgacattgtgtttcaaaattgcataagttttggtcttagcttgatgtcagttgtggaacaattcacaaacatatgtcctaatagaattattctcataccgaagctgaatgagatacatttgatgaaacctcctatatttacaggagatgttgatatcatcaagttgaagcaagtgatacaaaaacagcatatgttcctaccagataaaataagtttaacccaatatgtagaattattcttaagtaacaaagcacttaaatctggatctcacatcaactctaatttaatattagcacataaaatgtctgattattttcataatgcgtatattttaagtactaatttagctggacattggattctgattattcaacttatgaaagattcaaaaggtatttttgaaaaagattggggagaggggtatataactgatcatatgttcattaatttgaatgttttctttaatgcttataagacttatttgctatgttttcatagaggttatggtaaagcaaaattagaatgtgatatgaacacttcagatcttctttgtgttttggagttaatagacagtagctactggaaatctatgtctaaagttttcctagaacaaaaagtcataaaatacatagtcaatcaagacacaagtttgcatagaataaaaggttgtcacagttttaagttgtggtttttaaaacgccttaataatgctaaatttaccgtatgcccttgggttgttaacatagattatcacccaacacacatgaaagctatattatcttacatagatttagttagaatggggttaataaatgtagataaattaaccattaaaaataaaaacaaattcaatgatgaattttacacatcaaatctcttttacattagttacaacttttcagacaacactcat
| 7 | 10 | 0.8 | 0 | 427 |
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] |
|
101 | 15,222 | 428 |
PP377358.1
|
Homo sapiens
|
Human respiratory syncytial virus B
|
Orthopneumovirus hominis
|
Pneumoviridae
|
Orthopneumovirus
|
ssRNA(-)
|
PP377358.1 |Human respiratory syncytial virus B isolate 810102022, complete genome||Human respiratory syncytial virus B||2024-04-09T00:00:00Z|UMC Utrecht, Paediatric Infectious Diseases|Netherlands|Langedijk,A.C., Lebbink,R.J., Bont,L.J., Evers,A.|810102022|Orthopneumovirus hominis|Orthopneumovirus|complete|Pneumoviridae|ssRNA(-)|15222|GenBank||||Japan|Japan||Homo sapiens||2018-07-25||
|
aaaattagaatgtgatatgaacacttcagatcttctttgtgttttggagttaatagacagtagctactggaaatctatgtctaaagttttcctagaacaaaaagtcataaaatacatagtcaatcaagacacaagtttgcatagaataaaaggttgtcacagttttaagttgtggtttttaaaacgccttaataatgctaaatttaccgtatgcccttgggttgttaacatagattatcacccaacacacatgaaagctatattatcttacatagatttagttagaatggggttaataaatgtagataaattaaccattaaaaataaaaacaaattcaatgatgaattttacacatcaaatctcttttacattagttacaacttttcagacaacactcatctgctaacaaaacaaataaggattgctaattcagaattagaagataattataacaaactatatcacccgaccccagaagctttagaaaatgtatcattaatccctgttaaaagtaataatagaaacaaacctaaattttgtataagtggaagtactgaatctatgatgacgtcaacattctctaataaaatgcatattaaatcttccactgttaccacaagattcaattatagcagacaagacttgtacaatttatttccaattgttgtgatagacaggattatagatcattcaggtaatacagaaaaatctaaccaactttacaccaccacttcacatcagacatctttagtaaggaatagtgcatcactttattgcatgcttccttggcatcatgtcaatagatttaactttgtatttagttccacaggatgcaagatcagtatagaatatattttaaaagatcttaagattaaagatcccagttgtatagcattcataggtgaaggagctggtaacttattattacgtacggtagtagaacttcatcctgacataagatatatttacagaagtttaaaagattgcaatgatcatagtttacctattgaatttctaaggttatacaacgggcatataaacatagattatggtgagaatttaaccattcctgctacagatgcaactaacaacatacattggtcttatttacatataaaatttgcagaacctattagtatctttgtctgtgatgctgaattacctgtcacagccaattggagtaaaatcataattgaatggagtaagcatgtaagaaagtgcaaatactgttcttctgtaaatagatgcattttaattgcaaaataccatgctcaagatgatattgatttcaaattagataacattactatattaaaaacttatgtgtgcctaggtagcaagttaaaaggatctgaagtttacttagtccttacaataggccctgcaaatatacttcctgtttttgatgttgtgcaaaatgctaaattgattctttcaagaactaaaaatttcattatgcctaaaaagattgacaaggaatctatcgatgcaaatattaaaagcttaatacctttcctttgttaccctataacaaaaaatggaattaagacttcattgtcaaaattgaagagtgtagttaatggagatatattatcatattctatagctggacgtaatgaagtattcagcaacaagcttataaaccacaagcatatgaatatcttaaaatggctggatcatgttttaaactttagatcagctgaacttaattacaatcatttatacatgatagagtccacatatccttacttgagtgaattattaaatagtttaacaaccaatgagctcaagaagctgattaaaataacaggtagtgtactatacaaccttcctaatgaacagtaacttaaaatatcattaacaagtttggtcaaatttagatgttaacacattattatattatagttattaaaaaatatgcaaacttttcaataatttagcatattgattccaaaattatcattttagtcttaagggattaaataaaagtctaaaactaacaatcacacatgtgcatttacaacacaacgagacatt
| 8 | 10 | 0.9 | 0 | 428 |
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] |
|
102 | 2,781 | 429 |
AB613209.1
|
Solanum lycopersicum
|
Tomato yellow leaf curl virus
|
Tomato yellow leaf curl virus
|
Geminiviridae
|
Begomovirus
|
ssDNA(+/-)
|
AB613209.1 |Tomato yellow leaf curl virus DNA, complete genome, isolate: NS|set:4b972c3d48860a9e2169d88ea96ddefc9ccf64cc|Tomato yellow leaf curl virus||2011-02-23T00:00:00Z|Horticultural and Herbal Environment Department; 540-41, top-dong, kwonsun-gu, Suwon 441-440|South Korea|Chung,B.N.|NS|Tomato yellow leaf curl virus|Begomovirus|complete|Geminiviridae|ssDNA(+/-)|2781|GenBank||||South Korea:Nonsan|South Korea||Solanum lycopersicum||2010-11-01||
|
accggatggccgcgccttttctttttatgtggtccccgcgagggttacacagacgtcaccgtcaaccaatcaaattgcatcctcaaacgttagataagtgttcatttgtctttatatacttggtccccaagttttttgtcttgcaatatgtgggacccacttcttaatgagtttcctgaatctgttcacggatttcgttgtatgttagctattaaatatttgcagtccgttgaggaaacttacgagcccaatacattgggccacgatttgattagggatcttatatctgttgtaagggcccgtgactatgtcgaagcgaccaggcgatataatcatttccacgcccgtctcgaaggttcgccgaaggctgaacttcgacagcccatacagcagccgtgctgctgtccccattgtccaaggcacaaacaagcgacgatcatggacgtacaggcccatgtaccgaaagcccagaatatacagaatgtatcgaagccctgatgttccccgtggatgtgaaggcccatgtaaagtccagtcttatgagcaacgggatgatattaagcatactggtattgttcgttgtgttagtgatgttactcgtggatctggaattactcacagagtgggtaagaggttctgtgttaaatcgatatattttttagggaaagtctggatggatgaaaatatcaagaagcagaatcacactaatcaggtcatgttcttcttagtccgtgatagaaggccctatggaagcagcccaatggattttggacaggtttttaatatgttcgataatgagcccagtaccgcaaccgtgaagaatgatttgcgggataggtttcaagtgatgaggaaatttcatgctacagttattggtggaccctctggaatgaaaggacaggcattagttaagagattttttaaaattaacagtcatgtaacttataatcatcaggaggcagccaagtatgagaaccatactgaaaacgccttgttattgtatatggcatgtacgcatgcctctaatccagtgtatgcaactatgaaaatacgcatctatttctatgattcaatatcaaattaataaaatttatattttatatcatgagtttctgttacatttattgtgttttcaagtacatcatacaatacatgatcaactgctctgattacattattaattgaaattacaccaagactatctaaatacttaagaatttgatatctaaatactcttaagaaacgaccagtctgaggctgtaatgtcgtccaaattcggaagttgagaaaacatttgtgaatccccaataccttcctgatgttgtggttgaatcttatctgaatggaaatgatgtcgtggttcattagaaatggcctctggctgtgttctgttatcttgaaatagaggggattgtttatctcccagataaaaacgccattctctgcttgaggagcagtgatgagttcccctgtgcgtgaatccatgattgttgcagttgatgtggaggtagtatgagcagccacagtctaggtctacacgcttacgccttatgggtttcttcttggctatcttgtgttggaccttgattgatacttgtgaacagtggctcgtagagggtgacgaaggttgcattcttgagagcccaatttttcaaggatatgtttttttcttcgtctagatattccctatatgaggaggtaggtcctggattgcagaggaagatagtgggaattccccctttaatttgaatgggcttcccgtactttgtgttgctttgccagtccctctgggcccccatgaattccttgaagtgctttaaataatgcgggtctacgtcatcaatgacgttgtaccacgcatcattactgtacacctttgggcttaggtctagatgtccacataaataattatgtgggcctagagacctggcccacattgttttgcctgttctgctatcaccctcaatgacaatacttatgggtctccatggccgcgcagcggaagatacgacgttctcggcgacccactcttcaagttcatctggaac
| 0 | 2 | 0.5 | 0 | 429 |
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] |
|
103 | 6,477 | 431 |
MZ126536.1
|
Malus domestica
|
Capillovirus mali
|
Capillovirus mali
|
Betaflexiviridae
|
Capillovirus
|
ssRNA(+)
|
MZ126536.1 |Apple stem grooving virus isolate 13TF162B, complete genome||Capillovirus mali||2021-10-13T00:00:00Z|Canadian Food Inspection Agency, Plant Health|Canada|Phelan,J., Rott,M.|13TF162B|Capillovirus mali|Capillovirus|complete|Betaflexiviridae|ssRNA(+)|6477|GenBank|||||||Malus domestica||2013||
|
cagcgcttaatttccgcgctttacgtcaatggctttcacttacagaaatcccctcgaaattgcaatcaacaagcttccaagtaagcagtctgatcaactgctttctttaaccacagacgagattgaaaagaccttagaagtgactaatcgcttcttctctttttctatcactccagaagatcaagaattgttgaccaagcatggtctaacacttgcacccattggattcaagtcacattcccatcctatatccaaaatgatagaaaatcaccttctgtacatatgcattccaagtcttttatcttcttttagatccgtagcctttttctcgcttagagaaaataaagtcaataattttcttaagatgcactcagttttttcacatggaaaaattaagtctctaggcatgtacaacgccatcattgatggaaaagacaaatacaggtatggcgaagtttctttttcttcctttagagatagggtgattggtctcagggatcagtgcctcatgcgtaataaatttccaaaagttctctttctccacgatgaacttcatttcctaagccctttcgacgttgcttttctatttgagacaatcccagaaattgatagagtcatagcaactactgtttttccgattgaactgctttttggggacaaggtttcaaaggagcccagagtttacacctacaaggtccatggttcttccttttcattctatccagatggtgtagcctctgagtgctatgagcaaaatcttgcaaactccaaatggccgttcacttgtagtggaattcagtgggctaacaggaaaataagggttactaagttgcagagcctctttgctcatcacgtattttcatttgatagaggcagggcttgcaacgaatttaaccactttgacaagccgagttgtctccttgcagaagaaatgcgccttttgaccaaaaggtttgataaggcagtcattaataggagtacggtttcttctttgagcacttatatggcttgtctcaagaccgccaatgcagcttctgctgtcgccaagttgaggcaactagagaaaagggacctctatccggatgaactaaacttcgtttattcctttggggagcatttcaaaaattttggaatgagggacgattttgatgtgtcagtcttgcaatgggtgaaggacaaattctgtcaagttatgcctcacttcattgctgccagtttctttgagccaactgagttccatttgaatatgcgaaaattgttgaatgacctggccactaaagggatagaggttccactttcagtagtgattttagataaggtaaattttatagagaccagatttcacgccagaatgttcgaaattgccgaagctattggagtcagtttaagtctacttggaaaaaggtttgactatgaagctgaaagtgaagaatatttttcagaaaatggctatcttttcatgccttcaaggacaaatccaagtagaaactggatcttaaactctgggtctgtcaaaattgatttccagaagttgcagagggcaaggaggttcaggttgagaagagatttcgttgatttgattgctagaagggaaacccctcgaaagcaactattccttgagtcagctcgaactctccaatcaacgtctaaaagtgtggaggagaacatggacagtggagtcaaatccgacgaaagcagtaaaaaaatacagtcactcgaggtgccctgtgtcccgatgtccactgaagatgggcaaggctttgaaggttcaattccaattgacttgataaattccttcgagccagaagtaatcagacttccgaaaaggaagagaaagaatgattgtgtttttaaagccatctctgcataccttggcattgatgttcaggacctcttgaactttttggtgaatgaagatatatccgatgagttgcttgaatgcatagatgaagataaaggcctgtcgcacgagatgatagaggaagttctggtgacgaaagggatttctatggtctacacttcagatttcaaagagatggcagttctca
| 0 | 4 | 0.2 | 0 | 431 |
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] |
|
103 | 6,477 | 433 |
MZ126536.1
|
Malus domestica
|
Capillovirus mali
|
Capillovirus mali
|
Betaflexiviridae
|
Capillovirus
|
ssRNA(+)
|
MZ126536.1 |Apple stem grooving virus isolate 13TF162B, complete genome||Capillovirus mali||2021-10-13T00:00:00Z|Canadian Food Inspection Agency, Plant Health|Canada|Phelan,J., Rott,M.|13TF162B|Capillovirus mali|Capillovirus|complete|Betaflexiviridae|ssRNA(+)|6477|GenBank|||||||Malus domestica||2013||
|
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| 2 | 4 | 0.8 | 0 | 433 |
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] |
|
103 | 6,477 | 434 |
MZ126536.1
|
Malus domestica
|
Capillovirus mali
|
Capillovirus mali
|
Betaflexiviridae
|
Capillovirus
|
ssRNA(+)
|
MZ126536.1 |Apple stem grooving virus isolate 13TF162B, complete genome||Capillovirus mali||2021-10-13T00:00:00Z|Canadian Food Inspection Agency, Plant Health|Canada|Phelan,J., Rott,M.|13TF162B|Capillovirus mali|Capillovirus|complete|Betaflexiviridae|ssRNA(+)|6477|GenBank|||||||Malus domestica||2013||
|
tcaggtgatgggcttgtgttgtctgatttcaaactacttgatgacacagagatcgactccattagaaagaagagcaacaaatacaagtatctgcattatggagtcattctggtcgggattaaggctatgctaccgaactttagaggaatggaagggagggtcattgtgtatgacggtgcatgcttggacccagaaagaggtcacatttgttcctacttattcaaatttgagtccgactgttgttactttgggctcagaccggaacattgcctatccacaaccgatgcaaatttggctaaaaggttcagatttagagtggattttgattgtccacaatacgagcaggacacagagctgtttgctctcgacattggggttgcatacaggtgtgtcaattcagccagattcttggaaactaagactggtgattcaggatgggcttcacaggcaatcagcggctgtgaggcacttaaattcaatgaagaaatcaagatggcaatcctggatcacaaatcaccgctgtttctggaagaaggtgcaccaaacgtgcatattgaaaagagaatgtttaggggtgacaaagtcagaaggtcacgctctgtctctgcaaaaagggggccaaactcaaggctacaggaaaagagaggatttaggtccctctcagctagaatcgaaagatttggagaaaatgagtttggaagacgtgcttcaacaagcgagacgccaccgggtaggagtgtatctgtggaagacacacatagatccggcaaaggaacttctgacggttcctccccctgaaggattcaaggaaggtgaaagctttgaaggcagagagctttaccttcttctatgtaatcactactgtaaatatttatttggtaatattgctgttttcgggtcatctgataagacccagtttcccgctgttggatttgatacccctccggttcattttaatttgacaacgaccccggaagaaggggagactgaagagcaaaagaaggccagagagggatcgtctggtgaaaaaacaaagatttggagaatcgacttgtcaaacgttgtacctgaattgaaaacctttgctgccacttctaggcagaactctttgaacgaatgtacgttcaggaagctttgtgaaccatttgctgatctagcacgtgaatttctacatgaaaggtggtcaaggggacttgccaccaacatttataagaaatggcccaaagcttttgaaaagagcccttgggtggcttttgattttgccaccggtcttaaaatgaaccgtctaacgcctgatgaaaaacaggtaatagacagaatgactaagaggctttttcgtactgaaggacaaaaaggggttttcgaggcaggttcggagagtaacctcgaactggagggttaggagtcgtgtgaaattccgcaaacttggtcgcggtcttgcaggttgacatgcctgcctttatacttaaataaagggttcccccggttttctgtgcatttccgggttagtgtggtttttctagagtctagagt
| 3 | 4 | 1 | 0 | 434 |
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|
104 | 13,685 | 435 |
LC746716.1
|
Vitis
|
Grapevine leafroll-associated virus 4
|
Grapevine leafroll-associated virus 4
|
Closteroviridae
|
Ampelovirus
|
ssRNA(+)
|
LC746716.1 |Grapevine leafroll-associated virus 4 g14-C574 RNA, nearly complete genome||Grapevine leafroll-associated virus 4||2023-04-21T00:00:00Z|Institute for Plant Protection; 301-2 Akitsu, Higashihiroshima, Hiroshima 739-2494|Japan|Ito,T.|g14-C574|Grapevine leafroll-associated virus 4|Ampelovirus|complete|Closteroviridae|ssRNA(+)|13685|GenBank||||Japan|Japan||Vitis||2018-10||
|
ggatatcctacttaagatttcacataaaaaatataaattaaaagccccgaccattccagtcttcgcttcctttcttcacttcagataatctcaatctgaattgaaatccttccaaccctgttttcccgacatttttcaagcaccgctctgtgcacttgctccacaatccccagacaaaacatccattcattttccagatttgcatgtatctaaccgaccatgtccgcaccttcaccctcacagcacccaaaacctagattttccagagaagagaaaggtaaaagcactgtctccaccaccagcaagtacaccaacagtccaactctgttttccaggtccaacgcaaatagaacccataaaacagaggctgaacgcgcccagggcccccgcgccaagttttcccaactcaccaaacaagggaaagctgtgttgaagcaacaagcttccacacccacacctagagtcgacttgaccacaacgccacaaccggaggaggaatttctgcttatcggtacgcttaaagtgcccatttctcacattcctcaccaaccaaagcagacctccactatatccaaacctgagtccagcggctcaagttcacccacaccttccgtatctgttcattcatctgtttctgaaggcccagctttcaagctaccagaaaactatgtcagtcttttggatctgaaagccctgcaagacatctccacactttccacacctgcatcacaacccacttcaaaaaccccatctgagaatgggaagggacacatcaaagaagacggtgtgttcgggaaaaatgaaatgcccgcatcacaaagaccctctgcggcccaacacaaacaccaacctaaggtgcaggcaacaactcagggacccaacaacgtttccaaagtcagggtactcgcaaaaaatgctcgaacaaacgagcatactgccaaacgggagaatctgcctgatgttgacagatcccgctcaacagcaaaccgaggttcaattcccaaagctgatggaattgttagattggttaaaaacgaagctgaggtcaacatcaacctcctgaagtccgccgctgatgtcaaagcagtagcgatttttccctccagactttctttaaagtctcagcaaaagttggcctcattgttggattcgttgcatgttgctgcttccacatttctatccgactttatcatatctaggataaaaacagacacgttgaaagccattcaacgtaatattttgatatccaacacagggaaagttcacttctttaacaacaacggttcgtatgttggaactgtcgccgtagaagaacctgtttggttctacggccgtttggctggaagaaatgaccctctttatctgtcacttggaaaagggaaaacatctaaatgcttcataaaaacgaggtttcccactctacacgaattcttgagacacgattgggctgagggaaagagctctttgaagttcgtcactgtctacgatcccgtaggcaaacgtaactggttggggtcaaaagcattctgttggttgcccctttatctaaataataaagttcagctggatcagatcccaacttccgggttggtgcggttgtttacactgcaagatagattcggcttagtaccgatctcaaagaccggtaaatattatcactacagtccggaggggaagactcacaaaaaatttcccaacgtacttgtaggcgctgaaggtgcagtcactgaaatagtagacgccacctggaatgactgcttgagcgatccgctgcttagaactgcggtggacagtgtgctaaagaaaacagttctgaaagagacgtcttgtttccaaaccaatatagacgacttgtttaacaaggctctcaatcagactcttgatgtgaccaagtctaacaaagtcactatctctcagcacctgaactccgaagaattcgagcttttgaagagttatttcggtctcacctacgttgagaatggtgtacaatttagaggcgctcatcctctcttgaatgccataagagagtgttacaatagaatatatca
| 0 | 9 | 0.1 | 0 | 435 |
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|
104 | 13,685 | 437 |
LC746716.1
|
Vitis
|
Grapevine leafroll-associated virus 4
|
Grapevine leafroll-associated virus 4
|
Closteroviridae
|
Ampelovirus
|
ssRNA(+)
|
LC746716.1 |Grapevine leafroll-associated virus 4 g14-C574 RNA, nearly complete genome||Grapevine leafroll-associated virus 4||2023-04-21T00:00:00Z|Institute for Plant Protection; 301-2 Akitsu, Higashihiroshima, Hiroshima 739-2494|Japan|Ito,T.|g14-C574|Grapevine leafroll-associated virus 4|Ampelovirus|complete|Closteroviridae|ssRNA(+)|13685|GenBank||||Japan|Japan||Vitis||2018-10||
|
tgtcgaggtcagtgctgctgatgaagatgattcttccgtctacctagatgacctggaattggaggaggaaagaacaaaaaagaaggaggttaagactcgcaaagccggtctaaaagggggtggtaacaattggtatgatttcatcttaccatcaaagacgaaaagtgcagatggtgaatctctacttgtcgatttgtggagaatcgtcagaaaactggacagggctgtgcgcggaaactttgttatgggtcctctcatgaaggcgctgatgttcctgctgaaaggtttagtctttgttttaagaccagcttttcatgtagtttcaggagttaagactactctcagaaattctttctctgtgaaggaggagaagaagaccttaagaaaagtcatctccagtttcgttattgaaaccttagcaaaaatttgcaacagcctaggtttaacgtacttaaagaatcttgggtctgaagtcttaagtaccgttcgcagcgacatgagcctaagaatagaaaaaatggaagaagatgtcgatatatttttaaaatcgaaaattgcttccggtcttaaggctttagggttgaaatatcctaaaggttggttggacgaaaggcacaagttgagagtacttttcgatgcagcttggaaggccattaaagcataccctttagtgccggctgctggctgtttgttggttttactcttaacttccaagagcttaagggagaaggttttaaagctgccacaagaggccttttgttttgccgaaagagttagaataggcaaacctcttgttttgttttcagctcttataggcagtttgattggtagatactcgaccattgccagtctctttgttggtctcgaaagttgtcgtgatatgagtttgggcatgttgataccctcactgatccacagtattccatctctatgggattcagacgcaacgggacaaaaattggcgttgttgttgaaattttccgtcttttacaactattatggtgtgtacaagacagttttcaacgttctggataaggaggaaccacaaatccctgtgcgggatgtcgcggatgtagagcctggattggaggctttcactctcaacgccgatactgaggaagttttggaaaacttcaggaaaaacacaagagcccgtttagctgatagacaacctgaccgtaaggcaagtcttgaggatacaccgtccacctcaaactttcctgctaatagaaaagttgaacaagtggctgctaataaagtgtgtagtctcaaagggtcagactcaaaagtttccgttgatgacgttaccgccactgaggtcaaatcacaatcgcaggtgattcaaacggttgaagactctccttccacatctaaaggtattttgatagagtcggacatcaccccaaaacttgaagaatccagtgttcatacggtcgtcgaacctaaaaacacagatacgtctccaagtaaggtggtcccgaagagaaccgacgcacccgtctcaaccattcatttacccgaggtcagagaaccactggtttttgatggtaaatcaccagacctttcctccatttttacagctgaggaggaaccctcaagtgagactgttcccacagttgaggtcgtcgaatcagctccaccagtagaaaatatccaaaacttttctgacgtggaggacgctcgtttacaatgtgtctgtggagacactatgctgatggaaacttttacgcctccaggtccattgcctttgttaatgggagataagttaaaaggtagggaggcctggttttatagtcgaggaggagaatcttactcctacaccggcggtcaccacgagtctagaggatggttggatttactggacaaatatttagtcgcttgcaatcattccccaatggattttgatcactgtttagtgcaactctatggggctaattgcggtattccgtttcacagtgataatgaaccgatatacccaaaggacaatcctatcctgacagtgaatgtctttggctcggcaaattttaaagtttcatgtaaggttggtg
| 2 | 9 | 0.3 | 0 | 437 |
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|
104 | 13,685 | 438 |
LC746716.1
|
Vitis
|
Grapevine leafroll-associated virus 4
|
Grapevine leafroll-associated virus 4
|
Closteroviridae
|
Ampelovirus
|
ssRNA(+)
|
LC746716.1 |Grapevine leafroll-associated virus 4 g14-C574 RNA, nearly complete genome||Grapevine leafroll-associated virus 4||2023-04-21T00:00:00Z|Institute for Plant Protection; 301-2 Akitsu, Higashihiroshima, Hiroshima 739-2494|Japan|Ito,T.|g14-C574|Grapevine leafroll-associated virus 4|Ampelovirus|complete|Closteroviridae|ssRNA(+)|13685|GenBank||||Japan|Japan||Vitis||2018-10||
|
aatatccaaaacttttctgacgtggaggacgctcgtttacaatgtgtctgtggagacactatgctgatggaaacttttacgcctccaggtccattgcctttgttaatgggagataagttaaaaggtagggaggcctggttttatagtcgaggaggagaatcttactcctacaccggcggtcaccacgagtctagaggatggttggatttactggacaaatatttagtcgcttgcaatcattccccaatggattttgatcactgtttagtgcaactctatggggctaattgcggtattccgtttcacagtgataatgaaccgatatacccaaaggacaatcctatcctgacagtgaatgtctttggctcggcaaattttaaagtttcatgtaaggttggtgaaggggctgtcactctttccggtgcgaagtatttcttaatgcccaatggatttcaaagaactcataagcatgccgttacggcaacaaccgaaagattgagcatgacctttagggccacaaaaccgctcaaactgtcagttcggaggttcgttacctcacaaactgaagacgattcggaagattcgccggttgtggagagggcaattaggaaatcacttgttcctgagattaaaactgattcacacagtttcagaccttcttcaccaaagaccttgacggttaacaaaactgcctcaaatgctccgctaacgacctctatggaggccatcattggggtgagcttcaaccaacaggaagatttcctgaacatagaaaagttcaaaaacatgaagcacaaagtaactgtcgatggtaatgtcggtgtagtttatgaagcttttctgtacaatcttcatgaactatgtagggaactgtccgttgtgacgaaagttttaaagcaacccgatatcttggttggtaggaagagggagctttttgtggccagcatacctgaactgaaccagatcaaagtttgcaagaggcccgatctactgaaaaccaccgggctggactctttcgtaggctctgtggatgaaaagagactcatgttctccaacgatcccagtttagaagaacagagtgcgttaatatacctcactcctggaggtatatctttcccgctgaagagatgtcttggtctatttaagcttatgtccgctttgactgctgctgaagtagaccgagccttggtgggctgtaagtttataaacgctgtcccaggtgcgggtaaaactcatgagattaagactctcatgaaatcttatgttgacagcaaaataaatagcggactgatgttagttttaacatcctctaagaatgcagctgaaagcctgaacgattactgggattctcatattaaaaataaaaaggtgcttgtaatgactgtagattccttcatcttttcctgtggaaggtttatcactacagacgtcgattatgtctttattgacgaatgttatatgagtcatgcaggtttatgcattctaattgccgctatcaccaatccaagtgaactgtcgttttatggagaccgcaggcaagtgcctttcataaatcgaaatcctctttttgtagattctagaagcatgctggatgtaaagaaccacacgtacacagaaaagctgttgacatatcgatgtccggccgatatttgctactggatgtcttcagtagattttgagaggaaaggaggcagactttatcagggtagggtgaccaccccggctgatggtagaccattgaagagtgtgaaaagtgtaaatttctcacctagtgagttgtccttctttgacaatgtggacagggtgatgacatttacccaaatggagaagtcggatttaatatccaaatacactgcagctgggttgggtgaccgtctgagagccatggagttgataggtacagttgctgagagtcaaggtgagacctattctagggtcgccttagttaggacgaaagccgctgatgatcaagtatttgaatctttcccacataggctagtggcgttgactaggcacacacaatcactccaattcgtttgtctaccatc
| 3 | 9 | 0.4 | 0 | 438 |
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] |
|
104 | 13,685 | 439 |
LC746716.1
|
Vitis
|
Grapevine leafroll-associated virus 4
|
Grapevine leafroll-associated virus 4
|
Closteroviridae
|
Ampelovirus
|
ssRNA(+)
|
LC746716.1 |Grapevine leafroll-associated virus 4 g14-C574 RNA, nearly complete genome||Grapevine leafroll-associated virus 4||2023-04-21T00:00:00Z|Institute for Plant Protection; 301-2 Akitsu, Higashihiroshima, Hiroshima 739-2494|Japan|Ito,T.|g14-C574|Grapevine leafroll-associated virus 4|Ampelovirus|complete|Closteroviridae|ssRNA(+)|13685|GenBank||||Japan|Japan||Vitis||2018-10||
|
tttgctactggatgtcttcagtagattttgagaggaaaggaggcagactttatcagggtagggtgaccaccccggctgatggtagaccattgaagagtgtgaaaagtgtaaatttctcacctagtgagttgtccttctttgacaatgtggacagggtgatgacatttacccaaatggagaagtcggatttaatatccaaatacactgcagctgggttgggtgaccgtctgagagccatggagttgataggtacagttgctgagagtcaaggtgagacctattctagggtcgccttagttaggacgaaagccgctgatgatcaagtatttgaatctttcccacataggctagtggcgttgactaggcacacacaatcactccaattcgtttgtctaccatcaaagatgtcgaaaggtattggtagagacgtacagatgattgaaaagttggaagctagtatagcttcgacttttgtggtgcagcagcatgtttaacatttatgtcatgactgggactctttctggaaatttgggtgcagggtttgctaggccccctaggagtcattttgaaagtattcagcagtttttagatgatgtgatacccggtgtggggtcacttcaatttcttcactgtgaggctgactttcaaacttctgacttcgtaactaatatttctgacttctcattctctgagaatgatgtgaatattagagcaccaaagttcttcaaaaacatacccagaattagatcccatgtcatgacaaaaaggcaaaataccctaaaatccaatatcctagcttatgagaagcgtaacttctgtggtgaatccaaatcttggcatcccgatgttaatgaggaggtgatgagcgtcgttgatagattttttgaagtctacatagatgttgctaaggccgagagtcttttgagggaaaaggtaacagtcaattccaaagatctttcggattggtactcttctagaacacctctgggaaaaagtggtttagacagagagctcgaggttacggatattttaggttccgatctcaatcgctttaaactcatggtgaaaagtgatgtcaaattcaaactggattctgaagctctagacgacttttctccgggtcaaaacatcgtcttccacagtagattcatctgcgcccatttctctagtattttctgcgagttggtggggaggttacgatccgtattgacaaagaatgttatcctctttaacggtctttcgtttgaggaatttgcatctatgttagatgcctgcttgggtgatcgtccactctacaacttcaagagcgacgagatagacatctcaaaatatgacaaatctcaaaatactttcaccaaggccgttgagttggaagtatataggagattgggtctagatcaggagattttggatacctggggtgcgagtgaattctacggtaaggctactacaggttctaaaagtttttccgctgaagtgttcgctcagaggcgtaccggagctgccaatacctggattggaaacaccataattaacatggctcttttagctcaaagcaccgatccgagaaatttcactgccgcatgtttcgctggagatgattcattgctcatctatgaaaagaaaccttctatcagtttcgattgttatgaattgaaattcgattttgatgtgaagtattttgattcagcttcgatgtacttctgcggtaaatttctaatatctgatggtgcaaaaactcatgttgtaccggatcctctcaagttattcgtcaagttaggtaaggagcgaccaccttccgacaagttgttagtggaaaactggaggtcctttttggatgtcacaaaatcttacactaataacactgttctggagaatctggtgggccaatttgaaaacaaatattgttcttcaaatttttcctacgcagcattttgtgcgataaattcgcttagaagcaatccggaacaattcaagagattgtggttttctttatttaacgattcaggttcaagtgctaagtcaagaggtaagtgtgctgatgttgg
| 4 | 9 | 0.6 | 0 | 439 |
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] |
|
104 | 13,685 | 440 |
LC746716.1
|
Vitis
|
Grapevine leafroll-associated virus 4
|
Grapevine leafroll-associated virus 4
|
Closteroviridae
|
Ampelovirus
|
ssRNA(+)
|
LC746716.1 |Grapevine leafroll-associated virus 4 g14-C574 RNA, nearly complete genome||Grapevine leafroll-associated virus 4||2023-04-21T00:00:00Z|Institute for Plant Protection; 301-2 Akitsu, Higashihiroshima, Hiroshima 739-2494|Japan|Ito,T.|g14-C574|Grapevine leafroll-associated virus 4|Ampelovirus|complete|Closteroviridae|ssRNA(+)|13685|GenBank||||Japan|Japan||Vitis||2018-10||
|
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| 5 | 9 | 0.7 | 0 | 440 |
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|
104 | 13,685 | 442 |
LC746716.1
|
Vitis
|
Grapevine leafroll-associated virus 4
|
Grapevine leafroll-associated virus 4
|
Closteroviridae
|
Ampelovirus
|
ssRNA(+)
|
LC746716.1 |Grapevine leafroll-associated virus 4 g14-C574 RNA, nearly complete genome||Grapevine leafroll-associated virus 4||2023-04-21T00:00:00Z|Institute for Plant Protection; 301-2 Akitsu, Higashihiroshima, Hiroshima 739-2494|Japan|Ito,T.|g14-C574|Grapevine leafroll-associated virus 4|Ampelovirus|complete|Closteroviridae|ssRNA(+)|13685|GenBank||||Japan|Japan||Vitis||2018-10||
|
aaaggtacatacactatcggacaaacgcgctgagattcgtcaacttaccgaacatcctgcagttctacaagggttcaaatctcataacagtaaattttgaaggtgttgatgaagttttctcaacataccaacattctattccggagattgagagagcctggtgtgcacccttagcagatgttgcatacatgtttttgaaggacactggcggttcatttgctaagtggaaagatttaccggacattccgagtcacatgaatttcgacttcgtgggatacgtagatcccaagctgttgtcgagccctgagttaagtagtttgacttcactcacggaaagatttagatctaggaagactccgattcgaggtttccagttaggaggaagggcgcccaatcctatagatttcatggtggggaagctaagtttgtctgaaacagagcgtagttctgttaagagactagtttccaataaaattaaaggtaaaatatagactcagtgagtcatacggtgcatttgtttcgtttcgtcttaaatttgagataagttttatttcaaaaatgagcgatcaaactgcaacaccgccacctcaagaaaccgaggctcaaaaggttgagagactgaggaaagaaaaacaggcactcgatgagatcaactctcttcctgtagctaccggtcgtgtgaccgttgatacgtttgaatctctgatctcaggtccaaatgctgtactgaatctctcaaaacttgagattccgcggctgtttaacgtgactatacccggtgtggtttcgggtgcgcacaaagtgaaaggagccagagctttatgggagttgggaaaatcgaaagggataaccgagagtgataaacatcagatacaatttctgatgcaatcttttcaaagcttcataacacactcaacatcacctaaagtgtcgagcgcttccaataggtcgataactggcaaatatgacggtaaagatgtcactgtctcccacgacgagataaaaaccacgcttgacaattccatcgcatctttcggttacgaaaatacgatgaggcaatttggtagggctttcacagccgctattgtccagggactctcgtcaggaaaattggaggtgaatactaaaatatgtgcttcacacggcataccaccaaactactacccttactctccggattgtctgcatgttgatgcgcgactgtttggatacgatgcttcgttggcggctgaactagggaaaatggttgctgtcaacaagtcttccggagccagtgatactattcataacctgtacgaggggacgaaagtcgccccagaggtcttcatgggtagtagaaagtagagtctgggactcattcaattttcgtttgaaaatatggaatgtgttttggctttatctagaaatgtttcggacatttcaggcgaagatcgagacgtttttgaattgaaaagtgtaggtctctacgctactcttcttcctactgagcgtttatcgttcttctatgataagctgaacatacacataaattcatctaggaagcactaccctgagttattcaagtttttggataatttgggaaacgtagtcgctactaataatggagctttcttcaagttcctagactctcaagccgtggtcgatcacttcgttagaaaggatccatcactcgcggcttatcagagtaaacccgacgtctccggaggcagctattgtatgatagctgtaccggccttaagcagattcttaggaagtgtgcaacacagcctacgaagtctggtgaaggtgttagccgtaggtttcacccgtgtggatgattctgaggttttgtggggttttaaagactcgttcgtagtctttgaatacgaaggggaactacaagtgtattatggggatagcattgatacccgtaattctgcacttctcgaggttttcgactcttttatgagcacctctggaaaatcagattttgagaaggttgttggctttctctctatctgaatcaatgccaggtctgtgtgatcctgtcagacctgtaccgcttcctc
| 7 | 9 | 0.9 | 0 | 442 |
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|
105 | 9,598 | 443 |
KU171817.1
|
Zea mays
|
Sugarcane mosaic virus
|
Sugarcane mosaic virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
KU171817.1 |Sugarcane mosaic virus isolate CN:HB:15, complete genome|set:KU171817|Sugarcane mosaic virus||2019-11-20T00:00:00Z|Shandong Agricultural University, Plant Protection|China|Cheng,D., Yan,Z., Li,X.|CN:HB:15|Sugarcane mosaic virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9598|GenBank||||China|China||Zea mays||2015||
|
aaaacaacaaaactcaacaacacacaacaaaacacaaccaagcaaaaccaagttttctttgctcagattgtagtgaacggctcgcaagaaacggttcttcgagatcactctctgacttctttctctctcacacttgcattcaagcgggatggcgggatcgtggactcacgtgtcttacaagtggcagccaaatgtcaacaatgaccgtgatgtaagaaaggtaatggagatgtttgcagcaaaacatcaacattacacggaggagcagcgacttgcacataacagcaagttgctaaggaaggcgtacgttgtggacgttgaaccagtgaagccagcaccggagcctataaggcgtaaggtgtgggtggaaaaatttgaccacaacccaactgaagacctggtgtatccgcgccttgtcacggttaaaaaggcagcagaaatgaagcccgtgaacacctctataagtaaacttataagggatgttctggacatatcaaaagggagcagccttaaacttgagctgattggtaaacgccagaagtgcaaaacacaactggctattaagaaatacaacaataaggactacctccattgcaggacacgtcatgaagacaacatgttcaagaggagggatgtggcaatcggcattgagtgggtcccaaccattgaagcgattgctcgatgctacagcacagtaaacaaacaggagatgcaaagtctctacaaaggcagtagtggcttgacattcatgcaaaatgatgaattgttcattgttagaggcagaatgaatggcgaattagttaatagcctggaagagaacaggaatgtgctcgacatcgatcactacgctgatccacaagcgaacgacttttggagaggttatactgatgcatacgttgcgaatcgcagtatctccactacacataccgagcatactccaacaatcaatttggaagagtgtggaaagaggatggcattacttgaaatcttattccactcaacttttaagattacatgcaagacatgcaatattgatgacttggagttgtcagacgatgaattcggagcaaaacttttcaagaatctacaacgtatcgaggaacagcaacgcgaatatcttgctaaagatcaaaagcttcgtcgcatgattccattcatcaaagaaaggtgtaatccaaagttctctcatttaccattgctttggcaagttgcagaaacaataggacattatacggacaaccagtcaaagcaaataattgatatcagtgaagcactcatcaaagtgaacacattaacacctgatgatgcagtcaaggcaagcgtagcactgcttgaggtggcacgatggtacaaaaataggaaagaatcacttaaaacagacacactagattcattccgaaacaagatatccccaaagagcacgataaacacagcattgatgtgtgacaatcaactagacaagaatgcaaattttgtctggggaaacagggaatatcatgcaaagcgcttcttctcaaattattttgaagcagtagatcctaccgacgcgtatgagaagcacgtaacccgtttcaatccaaatggtcaacggaaattatcaattggcaaactagtaattccgttagatttccagaaaataagagactcattcgttggtttgtcggttaacaaacaaccacttacaaaggcttgtgttagcaaaatcgatggtggttatgtatacccatgctgttgtgtcacaacagaatttggaaaaccagcatactctgagataataccaccaacaaagggccatataacaattggaaattctgtagacccaaaaatcgtagatctgccaaatacaacaccaccaagtatgtacattgccaaagacgggtattgttatatcaacattttcttggcagcaatgataaatgtcaatgaggactcagcaaaggactatacaaaattcctcagggatgaattagttgagcgacttggaaagtggccgaaacttaaagatgttgcgacagcgtgctatgcgttgtcagttatgtttccggaga
| 0 | 6 | 0.2 | 0 | 443 |
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] |
|
105 | 9,598 | 444 |
KU171817.1
|
Zea mays
|
Sugarcane mosaic virus
|
Sugarcane mosaic virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
KU171817.1 |Sugarcane mosaic virus isolate CN:HB:15, complete genome|set:KU171817|Sugarcane mosaic virus||2019-11-20T00:00:00Z|Shandong Agricultural University, Plant Protection|China|Cheng,D., Yan,Z., Li,X.|CN:HB:15|Sugarcane mosaic virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9598|GenBank||||China|China||Zea mays||2015||
|
ttcgttggtttgtcggttaacaaacaaccacttacaaaggcttgtgttagcaaaatcgatggtggttatgtatacccatgctgttgtgtcacaacagaatttggaaaaccagcatactctgagataataccaccaacaaagggccatataacaattggaaattctgtagacccaaaaatcgtagatctgccaaatacaacaccaccaagtatgtacattgccaaagacgggtattgttatatcaacattttcttggcagcaatgataaatgtcaatgaggactcagcaaaggactatacaaaattcctcagggatgaattagttgagcgacttggaaagtggccgaaacttaaagatgttgcgacagcgtgctatgcgttgtcagttatgtttccggagattaagaacgctgaattgcctccgatactcgttgaccacgaaagcaagtcaatgcacgtgattgattcatacggctcattgagcgttggattccacatccttaaagcaagcactgttggccagctcataaaatttcaatatgagtcaatggatagtgagatgcgcgagtatatagtgggaggtactttaacgacccaaacatttaacaaactccttacatctttagctaaaaacatgttcaaaccaaatcaaattaagcagatgattgaggaggaacccttcctactaatgatggcaattgcgtcaccaactatgctcatagcgctgtacaataattgctatatagagcaggctatgacgtattggatcgttaaaaaccaaggagtggcagcgatattcgcacaactggaagcactggcaaagaagacctcacaagccgaattgttagtccaacaaatgcaaatactcgaaaaggcatctaatcaattgaggcttgcagtcacgggcttgaatcatgtcgatccagctaagcgtctgctatggtcgcatctagaagcaatgacaacacgatcagagatgaacaaggaattaatcgctgaaggctatgccctgtacgatgagcgcttgtacgcgcttatggaaaaaagttacgtagatcaattaaaccaatcatgggcagagttatcattctgtggaagattttcagcaatatggcgtgtgttcaaagtcaagaaatattacaagccgtctttaaccgtgagaaaaagcgtagatttaggcgctgtgtacaatatatcagctacgcatctaatatcagatttagcgcagagaagtcgcgatcgagtcagctctactttaaccaaactccgcaacggtttttatgataagttagagaaggctagaacccgagcaattaaaactgtttattggttcatacctgacatatttagacttatgcatattttcatagttcttagtttattaacaactgtggctaacactattattgtgactatgaatgattacaaaaagttgaaaaagcaacaaagagaagatgaatacgaagctgaaattaacgaggttcgaaaaattcatgccaatctaatgaaagagcacaatgacaatttaacatgtgaacagttcatcgaacatatgcgtcagacgcatccacgattaattgaagccacattggagttaacacacacaggcgtcattcatgaaggaaagagcaacctagaaaccaatctcgagcaggctatggcagtgggcactttactcacaatgattttagacccacaaaagagtgacgcagtatacaaagtattgaataaaatgagaactgtgattagtacatttgagcagaatgtcccatttccttcaatcaactttacaaatattttaacaccatcagtggcgcaacaaagtgtagatgttgatgaacccctaactttaagcactgacaagaatctaacaatagattttgacactaaccaagatttaccagcggatacgttcagcaatgatgtcactttcgaagattggtgggcaaatcaaataagtaacaatagaacagttccacattatcgacttggtggcaagttcgtagagttcacaagagaaaatgcagcgcatgtcagcattgagctcgc
| 1 | 6 | 0.3 | 0 | 444 |
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] |
|
105 | 9,598 | 446 |
KU171817.1
|
Zea mays
|
Sugarcane mosaic virus
|
Sugarcane mosaic virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
KU171817.1 |Sugarcane mosaic virus isolate CN:HB:15, complete genome|set:KU171817|Sugarcane mosaic virus||2019-11-20T00:00:00Z|Shandong Agricultural University, Plant Protection|China|Cheng,D., Yan,Z., Li,X.|CN:HB:15|Sugarcane mosaic virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9598|GenBank||||China|China||Zea mays||2015||
|
caagattccatattacatacgaggcgttcctgacaagttatatgggaagttgtatgacatcattctacaatatagtccaaccagttgttatggaagactatcaagcgcttgcgctgggaaggtagcatacaccttgcgaactgatccttgttcactaccacgaacaatagcaataatcaatgcattaattacagaagaatatgctaagagagatcattaccgtaacatgatagcaaatccttcgtcttcgcatgcattctcactaaatggattagtctccatgattgcttcaagatatatgaaagaccacacaaaggagaacatagataaactcattaaggtgcgggaccaattactcgaatttcaaggcatgggtatgcaatttcaagatccatcagaactaatggacattggtgccttgaacacagttatacatcaaggaatggatgcaatagctgcatgcattggactccaaggacgatggaatgcatcactcatacaacgtgatctcatgattgcaggaggagtattcattggaggaatattaatgatgtggagcttgttcactaagtggggaacaaccaatgtatcacaccaaggaaagaacaagcgtagccgacaaaaattgaagttcaagcaagctagggacactaaatacgcatatgatgtgacaggatcggaagaaactcttggtgaaaactttggaacagcttatacaaagaagggcaaaggaaaaggaactaaagttggtcttggggtgaagcagcataaatttcacatgatgtatggttttgaccctcaagaatacaacctaattcgttttgtcgaccctcttacaggtgcaacattagatgaacaaatccatgctgatattcgcttagtgcaagagcactttgacataatccgagaagaggcagtcgcaaacgacacaattgagcggcagcacatatacggaaatcctggtcttcaagcattcttcatacagaatggatcagctaatgcattgagagttgatttaacaccacattcacctttgcgtgctgtgacgaacaacaacatagcaggatttccggaatatgagggcacattgcgacaaactggcacagctctcactatacctgtgaatcaagtaccagcagcaaatgagacaggagttgcccacgaatccaaatctatgatgtctggattgggtgattacacacctatttctcagcagctctgtctcgtacaaaatgattctgaaggagtcaaacgtaatgtgtacgcaattggatatggatcatatttaatatcaccggcgcatcttttcaagtataacaatggtgaaatcacaatcaaatcctcaagagggctgtacaaaattagaaactcagtcgatgtcaaattgcacccgattgcacagagggatatggtcataattcaacttccaaaagacttcccaccgttcccaatgcgacttaagttttcaactccgtcaagagatgtgcgtgtgtgcttagttggaatcaattttcaacagaatcataccacgtgcataatatctgaaagcagtgtgacagcacccaaaggaaatggtgatttctggaaacattggatttcaactgttgatgggcaatgtgggctaccgttagttgacgttaagaataaacacattgttggaattcacagcctggcctcaacaagtggaaatacgaactttttcgttgcaatgcctgagaacttcaatgaatatatatctaatctcgtgcaaacgaataagtgggaaaagggatggcattacaacccaaatcttatttcatggtgtggtctaaacttagttgattcagcacctaaaggattatttaaaacatcaaaacttgttgaagatttggatatgagcgttgaagaacaatgcaaggtgacagagacatggttgacggaacacatccaggacaatctacaggtcgttgcaaagtgtccaggccaacttgtaacaaagcatgttgttaaaggcccatgtccgcattttcaactgtatttatccacacatgatgaggcaaagttgtact
| 3 | 6 | 0.7 | 0 | 446 |
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] |
|
105 | 9,598 | 447 |
KU171817.1
|
Zea mays
|
Sugarcane mosaic virus
|
Sugarcane mosaic virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
KU171817.1 |Sugarcane mosaic virus isolate CN:HB:15, complete genome|set:KU171817|Sugarcane mosaic virus||2019-11-20T00:00:00Z|Shandong Agricultural University, Plant Protection|China|Cheng,D., Yan,Z., Li,X.|CN:HB:15|Sugarcane mosaic virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9598|GenBank||||China|China||Zea mays||2015||
|
cacattgttggaattcacagcctggcctcaacaagtggaaatacgaactttttcgttgcaatgcctgagaacttcaatgaatatatatctaatctcgtgcaaacgaataagtgggaaaagggatggcattacaacccaaatcttatttcatggtgtggtctaaacttagttgattcagcacctaaaggattatttaaaacatcaaaacttgttgaagatttggatatgagcgttgaagaacaatgcaaggtgacagagacatggttgacggaacacatccaggacaatctacaggtcgttgcaaagtgtccaggccaacttgtaacaaagcatgttgttaaaggcccatgtccgcattttcaactgtatttatccacacatgatgaggcaaagttgtacttttcacctttgcttggaaagtatgacaagagtaggttgaacagggcagcattcatcaaagatctctcaaagtacgcaaagccgatttatattggagagatcaattatgaaatctttgagaaggcagttgaacgagttataagcatcctcagaagtgtaggaatgctacagtgtacatacgtgacggacgaagaagaaattttcaattcgttaaacatgaacgcagccgtaggtgcactatacacaggaaagaagaaagactatttcaaagatttctcgaatgatgaaaaagccgaaatcatcatgcgttcatgtgagcgcatctacaatggacaattgggtgtatggaacggttcactcaaagctgaaatacgaccaatagagaaaaccatactaaacaagacacgcactttcacagcagcgccattagaaactctgcttggtgggaaagtatgtgtggacgatttcaacaatcaattttattcacaccatcttgaaggcccatggaccgtaggaatcacaaagttttatggaggatggaaccgacttttggagaaattgccagaaggatggatttattgcgatgcagatggatcccagtttgacagctcactaactccatatcttattaatgctgtattgcacattcgcttacatttcatggaagaatgggagttgggagctcaaatgttgcgaaacttatacacagagattgtttacacgccaatcgcaacacctgatgggtctgtcatcaagaagtttaaaggaaataatagtgggcaaccatctacagtcgttgacaacacgcttatggttatcatagcatttaattatgcgatgttatcaagcggcattcctgaagacaaaattgacgactgctgtagaatgtttgcaaacggtgacgacttactcttggcagtgcatccagattacgaacatatattggacggatttcaaaatcattttggaaaccttggccttaacttcgaattcacatcaaggacaaaggacaaatcagagttatggttcatgtcaacacaaggagtcaagtgtgaaggtatctacataccaaaactcgaaagggaaagaatagtcgcaatccttgaatgggaccgatcgaacttgcctgagcatcgtcttgaagctatttgtgcagccatggttgaagcatggggttacccagatttagttcatgaaattcgaaagttttacgcgtggcttctcgaaatgcaacccttcgcgaacctggcaaaggaaggcatggcgccatacatagcagaaacagcactccgcaacctttaccttggaacaggcatcaaagaagaagaaattgaaaaatattttaagcagtttgtcaaggatcttcctggatacgtagaagattacaatgaagaagttattcatcaatctggccatgttgatgcagggagacaaggcggtagcggcggtcaaggaggcacaccacctgcaggaaatggtggtcaacaaggttccggtgggaatggcggaggccagacaggaggaagtggaggcactggatctggcactcaaggcaatgggggtcagacgggatctcaaggaaacggtggtcaacaagggtccggtgggaacggcggaggccagacaggaggttctagtgggacagctgg
| 4 | 6 | 0.8 | 0 | 447 |
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] |
|
105 | 9,598 | 448 |
KU171817.1
|
Zea mays
|
Sugarcane mosaic virus
|
Sugarcane mosaic virus
|
Potyviridae
|
Potyvirus
|
ssRNA(+)
|
KU171817.1 |Sugarcane mosaic virus isolate CN:HB:15, complete genome|set:KU171817|Sugarcane mosaic virus||2019-11-20T00:00:00Z|Shandong Agricultural University, Plant Protection|China|Cheng,D., Yan,Z., Li,X.|CN:HB:15|Sugarcane mosaic virus|Potyvirus|complete|Potyviridae|ssRNA(+)|9598|GenBank||||China|China||Zea mays||2015||
|
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| 5 | 6 | 1 | 0 | 448 |
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|
106 | 26,769 | 449 |
KX947267.1
|
Penaeus chinensis
|
yellow head virus type 8
|
Okavirus orientale
|
Roniviridae
|
Okavirus
|
ssRNA(+)
|
KX947267.1 |Yellow head virus type 8 isolate 20120706, complete genome|set:KX947267|yellow head virus type 8||2017-02-26T00:00:00Z|Yellow Sea Fisheries Research Institute, Mariculture Biological Laboratory for Disease Control and Molecular Pathology|China|Dong,X., Liu,S., Zhu,L., Wan,X., Liu,Q., Qiu,L., Zou,P., Zhang,Q., Huang,J.|20120706|Okavirus orientale|Okavirus|complete|Roniviridae|ssRNA(+)|26769|GenBank|||1|China|China||Penaeus chinensis||2012-07-06||
|
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|
106 | 26,769 | 451 |
KX947267.1
|
Penaeus chinensis
|
yellow head virus type 8
|
Okavirus orientale
|
Roniviridae
|
Okavirus
|
ssRNA(+)
|
KX947267.1 |Yellow head virus type 8 isolate 20120706, complete genome|set:KX947267|yellow head virus type 8||2017-02-26T00:00:00Z|Yellow Sea Fisheries Research Institute, Mariculture Biological Laboratory for Disease Control and Molecular Pathology|China|Dong,X., Liu,S., Zhu,L., Wan,X., Liu,Q., Qiu,L., Zou,P., Zhang,Q., Huang,J.|20120706|Okavirus orientale|Okavirus|complete|Roniviridae|ssRNA(+)|26769|GenBank|||1|China|China||Penaeus chinensis||2012-07-06||
|
atactttgctcagttcacccgcctcatcgtctacgctctctgcgcccacatcatctacacaattgtcaagatgcttgaaccgcgcgaagaactcgagattgtcaccgaaagcacaacacagtcatcaaacttcagatcaacacgacgttcaacacatacacaagcatacactagacctacaacggccgcagttgttattgtggttgccctcaccttcactctgatcgtcagtactgccagtgctaatcaggtcttctctcgcgatccctctcacaaattctactcttatcttgaacctatcgaaagctgcgacaacccatcctacatcggacagatcgactatgatagattctggaagatgccaagcacattccaatttcccaacggcatgacgctcgaggattacctaatggaagaagtctgttacgacgaatccattctggacctcctgcaccctgtctacgtgattgacggaattaaccttgaagtcacccaggctatcagttgcgatcatcatctcagtgtcaacaaaacccaactctcctattgtctcgaagaacgagtcagtgaaaaggacatgacactaatgacccaggcacagctcaagaaattcgccctcaagtacaagcgacgcgcagatgaaaataacacagtttcacacacagtccaaacagtaaacattgtaggcatcacactgacatacagatccaattacacatacacactcccatacggttcactcacttgcaactcagaacacgcatactgctcatacatggccaaggtcctcggatctacacacacactcccagccagcgccttacagtattgccacggtaacgaggaattctgtgaatacaagcgcttcgacgactccgatctctgcacactctactaccgtgatctcacaattgctccggacactgaccccgaggacttcaaactcgctcagcagttccgcgaacatgtggcatcactctgtggaatccgtgcaaacttccacgacgcgcacctcaccgaacccaagtcaacacccaagagccgacgtggtgaatggtactcttccaccctccgtatcgctaatcaccgctcacgcaatgggcaatgcattgtcaacgtctgtggctcggtcccaaccgatttcacagatcaaggcatcgacttcgaattccaatccgtcaacgactgcactccatcaaacaccaccgcagactgcgttgctattgacttcgcatatgagttcgcatacagctacatccacaagaaggttatgcacgatggtcacgtcccctacatcagtcggatcgtgaacctcatcccaggcattcctgaagcttacacgcgactcgccgctgtctacaatgctgtggtcaacattccctctgaagaaattgttgatagattgtacgaacagattgacaacacagcccagcttgccacccgccgcctagagaacatcaaatacgttccgcaggtcgccaaaatgactgctgaggtactgttcgctgatcgcattgtcaagagatacacactcgtcggtatcaaaacactttgcttagccagattcgaaaaatcggtgtgcaagaaattgattatcgccgtcaatgggttcatcaacaacgatcacctcatcatcgaaacagactttgacaaatccacattcaccgcactctatcacttcatcacgaaacactacaaggctaagtacaccgctcctcaacctgtgtgcaaatcgcctagccgcatgacaccaacacaacgctacatcaatgactgtgacatccaactcgaactgaaacgtcgtaacatcaacttcgtcgaaggccaagtggattattcgcgcacaaatatcacaatcctccacaacgtcccgaaaagtcagatcaacgtcatcttcacccccaccggcacagaatactacgactccaacgatcatcagctcgcaacaatcactgacaagcgtttcattgtaaacggaacaacatacacactcccatctgatctctatctcaccgcacaaggaaagaacaagcagagcagacactggc
| 2 | 17 | 0.2 | 0 | 451 |
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|
106 | 26,769 | 452 |
KX947267.1
|
Penaeus chinensis
|
yellow head virus type 8
|
Okavirus orientale
|
Roniviridae
|
Okavirus
|
ssRNA(+)
|
KX947267.1 |Yellow head virus type 8 isolate 20120706, complete genome|set:KX947267|yellow head virus type 8||2017-02-26T00:00:00Z|Yellow Sea Fisheries Research Institute, Mariculture Biological Laboratory for Disease Control and Molecular Pathology|China|Dong,X., Liu,S., Zhu,L., Wan,X., Liu,Q., Qiu,L., Zou,P., Zhang,Q., Huang,J.|20120706|Okavirus orientale|Okavirus|complete|Roniviridae|ssRNA(+)|26769|GenBank|||1|China|China||Penaeus chinensis||2012-07-06||
|
gacaaatccacattcaccgcactctatcacttcatcacgaaacactacaaggctaagtacaccgctcctcaacctgtgtgcaaatcgcctagccgcatgacaccaacacaacgctacatcaatgactgtgacatccaactcgaactgaaacgtcgtaacatcaacttcgtcgaaggccaagtggattattcgcgcacaaatatcacaatcctccacaacgtcccgaaaagtcagatcaacgtcatcttcacccccaccggcacagaatactacgactccaacgatcatcagctcgcaacaatcactgacaagcgtttcattgtaaacggaacaacatacacactcccatctgatctctatctcaccgcacaaggaaagaacaagcagagcagacactggcataactacggacatcgcttttacaacgctgaactcataaaacccggcaccaaccgtggccatatgattccatcgttcctaggcggtcccgcagtctatgccaatgccttcttgcagacaatccaagctaaccttgatgacacacccttcgaaaatcaagcaatcggtgtcgtgtacaacaagcacatcacaagctacaacccaaatgacatcatcatcggggatgcttctgatccttggtgccacatcaacccttcaacacaggaaacaccaactcttccacttccatctgatgtaagtgaagctgagacattcatcctcacacacggtaacatattcacagtcacacacgaccatccttaccacaccgaagacgagttcaaactcatccgctccctcgccctcccttgcggcgtctattcttacaccgtcagcctcagtggtgaagtcgttcgtcgatggaacccatctgatcagaccggtggtaagactctcctccatcatcctgtcaacactacacacatcaggacatgggaactcactacaacctcactaaaaaccaccctcaacactatcgcgaaactccgacaccccgtcctccaaacccttggattggaatcggatctcatcgccagtgcacacccgctacacatccgaaacactctcggctcactgtacacattcaaacacctcgcataccttctccccgttgccctccgctgtgcctctggtgtcgccgtcaatttcggaattaaccctccgctatcaaactgcactctagacaacggctacggcatcgaacaatctggtctcccttctcttgaacacagcacccagaatttcaccgcactcaacaccaacatccccactacatacacactgagtggcgacatccgtgacatgacctgcctctacaacgcaatcagactatgggctgacgctaacgactacaccacatcattcaccgacaccgcagacatcacattcaaattcgataactctgccctgccaacacgctgctacaactacatcatcccagctacacatgcatgtgacagttcaacatacgaaattccagccgaagatctcacctacttccaacaggcatccctcgcaatcatctgcaaagagcattccaacatgtattgccatcagctcaacctcgaaagctatccacggccaacgtactcagagttcatggacaatctgctcaacctgacttgcggaatcttcaacgccaccgaaccagtccttcgctgcacaacagaataccagatcattcaaactcctccacaggtatacaacaccacactcgaacaattcacagacgctaaattacactgtccaatttacatcgagcccactcctggaatcatgaactctagcctcggcgtatacacatacagctacgagaacagagtaattggatctagtgagagcatctctacacgtcttccttccgacattctcatcctatacaagaacatcaccgaagtaaaacacaacacagacacgcagctttgccaatccgaggggaacaataccctgttccacaacggttgcaatctcaagattactcacggcacaccttcagcaccagtttacaccacatatccagacagacatcacgacatcatccaagtccaact
| 3 | 17 | 0.2 | 0 | 452 |
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|
106 | 26,769 | 454 |
KX947267.1
|
Penaeus chinensis
|
yellow head virus type 8
|
Okavirus orientale
|
Roniviridae
|
Okavirus
|
ssRNA(+)
|
KX947267.1 |Yellow head virus type 8 isolate 20120706, complete genome|set:KX947267|yellow head virus type 8||2017-02-26T00:00:00Z|Yellow Sea Fisheries Research Institute, Mariculture Biological Laboratory for Disease Control and Molecular Pathology|China|Dong,X., Liu,S., Zhu,L., Wan,X., Liu,Q., Qiu,L., Zou,P., Zhang,Q., Huang,J.|20120706|Okavirus orientale|Okavirus|complete|Roniviridae|ssRNA(+)|26769|GenBank|||1|China|China||Penaeus chinensis||2012-07-06||
|
cgtaatcttcatcggcttgtacaaactcatctctgcacaattcacacaaccgcattggcgtacgtatgttaacgtgtcagtcggaattgaagacatcgctgtcctaggttacacccagaccaatcaggttagaaaggcagccgatgagctcatgaagaaatcaactgacgacaagtacaactactaccaacaactagacgccttcgtgcacgccgcattcctcaatgcatatgctcaagcaatcgattccaaaatccctctcaacttcactcaccgcaacctcaacttccgcgtctcccagcccaaggcaaacttccttgtcggcctcgtcactcatgaggttaacacaggtaacgccacaaaggttgaagacctccacaaacacccatacaacagataccgcaataacatcgtgcgcgtatatggtgaacgtggtgatcttaacggtttcctcagcggtaagttcctctactttcctagacacgtcttcgactcatgcacagataacacacgcacacgctacatccgcgtcacaaaaggtgaagaaactcatgacatcgagatgttgggcgaagaatacgaggccacaccattcatcaaggttgagagcccattcgaagaagctatcgagctcaaattcgctacactcaaacagacacagtacgcctacttcgtcaccgccgatgacatcaggattggttccatgtccgtcgacggctatcacaacatttctaccaaggatggtgattgtggatcactcctctttgaccaccttcataatgttgttggtgcccatatcgtcggcattgctagcactcctcctgttaacggcgccctgacctggaacgctgaaaaagaaatgctctgcggccccaatgacgattacgactttgatccatctaaagtcgagatcccaaaggtctggcccgtcgagacaatcactgctctcagcacaatcctcaaccagctcaactatgtcaccggtgacgcgttcacaactccaaaactgccaacaaactaccatctcattggttgtgcaacactggaccaatacgtcaatgcccgtaatctcgtaaccggccaattccctcaaatcaaggaggcactcgacgatttcatcaatggatacgtcgccaacatgcaacgagggactgaagcctacaacgtgatctacacaagcatgaacgctcaagtccgaatcgctgacctctctcctctcagcagctcaatcaccaattggcaataccttgtcgacccactccttcgcttccgatgcttcatcttctcattagtcaagcagtacatccgacacctcgtcatctaccttctcctccaactagccttcatctgctttgatcacggcttcttcttcaaggtactacgagacccaacccatttcctcttcacaatcctcagcactgttttcgtttctatcagccccactgctagcacgaataacatcctcttcaagtatctgctcagctacacggttgaatacagattcgcatacctcaacgtcgaaactctcatcaaatcatacctctatctcagttctcgcgaagcaatcttctacacatctcgtagggttaacaagctctgcaccctcttcactgtcatagccatgatcatcatcgacaccttcttcgttgaaatcggtggacaaaacgttctccccgtgctcatcctctgtattcctatcttctaccttcgtactgtaatgatgggatctgcccaggttcaagtgtatttcgaagctgatttgcacaaacctactgcaaatttcatgactctcatttacttcttgatcatcaacgctctctccattatcatttactgctggggcctcttctcattcaacccatatgccaacaacatcctattcgccacaaccattgtccacttcattgcattctatgttctctctcaggaggttcaaaaggtgttcgaagccaacacattccgtgttccaaggctggtatatgctgttatctcctacatctctcacgttctttgccacatctactcagagatgcttaacaaggtatgcg
| 5 | 17 | 0.4 | 0 | 454 |
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|
106 | 26,769 | 455 |
KX947267.1
|
Penaeus chinensis
|
yellow head virus type 8
|
Okavirus orientale
|
Roniviridae
|
Okavirus
|
ssRNA(+)
|
KX947267.1 |Yellow head virus type 8 isolate 20120706, complete genome|set:KX947267|yellow head virus type 8||2017-02-26T00:00:00Z|Yellow Sea Fisheries Research Institute, Mariculture Biological Laboratory for Disease Control and Molecular Pathology|China|Dong,X., Liu,S., Zhu,L., Wan,X., Liu,Q., Qiu,L., Zou,P., Zhang,Q., Huang,J.|20120706|Okavirus orientale|Okavirus|complete|Roniviridae|ssRNA(+)|26769|GenBank|||1|China|China||Penaeus chinensis||2012-07-06||
|
gaaatcggtggacaaaacgttctccccgtgctcatcctctgtattcctatcttctaccttcgtactgtaatgatgggatctgcccaggttcaagtgtatttcgaagctgatttgcacaaacctactgcaaatttcatgactctcatttacttcttgatcatcaacgctctctccattatcatttactgctggggcctcttctcattcaacccatatgccaacaacatcctattcgccacaaccattgtccacttcattgcattctatgttctctctcaggaggttcaaaaggtgttcgaagccaacacattccgtgttccaaggctggtatatgctgttatctcctacatctctcacgttctttgccacatctactcagagatgcttaacaaggtatgcgaatggatccttcgggctctcatcaacgctaaccgcgcagcactcttcggtggattcttcggcatcttccttctcatctgtttcctctgttactacttcctcaagaatcgctcaacagtcaaacatgaatcaaacgacatctcagaagcacacacacactttgactcattcgccaaactcactacactcatcgccaacaatcccaaacttgcttgcatgaaaccgttctgcgttgactacaatgacaatcgtgcgcgtatgaccctcaaagaaaaaggtaactgggttgtcaaggtgcgcgacgctctcctcactcaattcagcctaactaatccggctgatttagcagaagtgatccacgagtgcgccagtcatccgactctgaacaaactattcttcgacagctcaagaggtctgcaggtctaccatgagatcgactccaagctcgatcaagccccgtataccggtgataacgatcagatcaaatccgatactgccgttcttgccgaatacaggaatgaactcagcctcattgaatggaaggtagtcaccttacaaaaggaactctcagaagcaaaatccgcagaagacaaagacaagatcaaagggatcaacacacaactcgctgacctaatgaagcagcgcaaaacactcaccacactctcaaacacactgaaccagtcaatcatggctagagatgccaaggaacgccgtaacgccagacgccaaaacaacgaagaagcaaatgaaattgctcgcgtaatcaaggctcaacgactccgtgactctcttaccctcatcttcaacacattcatcaacaatctcattaaactgacatccgactgcaatgcgctgaaatcatacgctgacaacgttctcaagtatgtgcccgaagaaacaaaggacttcctcaaacgttctgacaactgctaccgcctctctcaggacatgatcctcattgaaacacctgccagtcctctatcctacttcaaggaaaagaacggcatcatcgaggtcatcaactcctgcagctatgacaccttcaaagacggcatggttgttaatcacatcctcgacggcactaccaaactcccctacaccctcgactcactcaagtcatctacacatgtggtttgttatgaaccagacacctcatccggctacacacacacacatgacaacacttgcagacacgaagccaatgccaaggtcggacaaaccctaccatgcggcacagctctcgaatgcaaccaccaacactaccacaaccaattcgattgcacttctggttactttgctttcatggcacagcacatcacagagtgtgagacatgcctcgacaccttcaagcgtggacactgtggctgcggataccgatacaaggttccccgcgtcctccagtcgttcatcctccacggatcgaaatgttctcacgtcacccacgaactcagctactctggcaccgccgcagccttcaaaccatactatgatgaagctacaaacggtatcatgtacaagtccgccgtgatcgcatacctcaccaaaccagacaactacacaagtacattcacctacaacaatgaaacatactatcttcccgtccctctcactcacgacatcgtctccatcctcatcgctttcgctacgcg
| 6 | 17 | 0.4 | 0 | 455 |
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|
106 | 26,769 | 456 |
KX947267.1
|
Penaeus chinensis
|
yellow head virus type 8
|
Okavirus orientale
|
Roniviridae
|
Okavirus
|
ssRNA(+)
|
KX947267.1 |Yellow head virus type 8 isolate 20120706, complete genome|set:KX947267|yellow head virus type 8||2017-02-26T00:00:00Z|Yellow Sea Fisheries Research Institute, Mariculture Biological Laboratory for Disease Control and Molecular Pathology|China|Dong,X., Liu,S., Zhu,L., Wan,X., Liu,Q., Qiu,L., Zou,P., Zhang,Q., Huang,J.|20120706|Okavirus orientale|Okavirus|complete|Roniviridae|ssRNA(+)|26769|GenBank|||1|China|China||Penaeus chinensis||2012-07-06||
|
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| 7 | 17 | 0.5 | 0 | 456 |
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|
106 | 26,769 | 457 |
KX947267.1
|
Penaeus chinensis
|
yellow head virus type 8
|
Okavirus orientale
|
Roniviridae
|
Okavirus
|
ssRNA(+)
|
KX947267.1 |Yellow head virus type 8 isolate 20120706, complete genome|set:KX947267|yellow head virus type 8||2017-02-26T00:00:00Z|Yellow Sea Fisheries Research Institute, Mariculture Biological Laboratory for Disease Control and Molecular Pathology|China|Dong,X., Liu,S., Zhu,L., Wan,X., Liu,Q., Qiu,L., Zou,P., Zhang,Q., Huang,J.|20120706|Okavirus orientale|Okavirus|complete|Roniviridae|ssRNA(+)|26769|GenBank|||1|China|China||Penaeus chinensis||2012-07-06||
|
ttcgacaacatcacatccgctccatgcacagacgaacgatacaacgaagtcatgacagggatcactcgcttatattatgcataccagtatgatagaggtgattttccttgcaaatacacagtcactcaaacacacatcaaataccccgtaattggcgatgtccctgtggaacctgaagaatgcaaagacctcaattgcaatagttacccgccagtatatggtgccctgatctccatccagaagttcagcacttgggcccgcctcttgtgctacgacgttctcaaaagggttttcagacactgccgtaactgcgaccacctcaattgcaagatctcaagacagctcacgcgcttcaaaaatccactctccaacatccaaccagtcgcatacacaaaactacacgacgaccgttacctaatccgtgaccgtctcacacaaatggacttcacgtcaggtcaagaattttacgcaacagaattcataaaagagttcaataacgttgagttcaagaccttgaacggagacaagatacacttcaacctcactcatccctatgacgcactcctcgaacctctacttcctcctaacactctcgttggcaattcagtagcagcatcaggtgtcatcagtgatcttgacgccaatttcaaaaactacgacagaaacaccggcatgtcctgttctctcactgaattccaactctctctctcccacatcctttaccgctccgaagcacaacgtacacctgacgatcatctcgacctaacaccttacgaagacactaagaaacccgcatccaagaaatcatctggcatcggcatcaccaaacttccacaaggctacgtccgctcactcagtgactacacatccttcatcacagcacaaatcgaacacatcaaacaccacttttcagtctggctatttgaggtgattccaaagatctccatccaacctgtggataaagcactgcgttcaatcttcatcggccccgccttcatgaacgatgtgtatcgctgcttcaacaccgcatggctagaattcactaagacacgactttcatacaacacagtccttataggattcaaagacacacactgtggtatcaacaagttgatcaatgggatcaaagcaggattcaatccaaaaggcaaagccaagtggatctcacaggactatcccaagtttgacacttgcgttgacaccatggcacagtactcttacatcatgaatcacgcttatcactacaccaacaaaaacctctcactcatcacacgtggactctgtcaactcattgcaaactccaccagcccaatcatctactacaacagcatgctcatcaggaaactgcatggggtgtcaagtggtgacggcgcaactgcaatcaagaacagccactgcaacagcatcatcacaaacatcgcattctacagacagatcatcgacaatcaagtacccgcagaatatcgcggccttcagtccacactctatcacacactcatcaacggaatacaaaacaaagatgacgcctactctacacaccgcgctttcgagtggaacatctctcgttgtgccacccttagtgacgacacactcgccatcatcaatcccgacgtcttcgaccttgatcaatacctgtcaagctatcgaactctaggtggttatgaaatcaccaacgagaaaaagatcttcgttcgcgatgagccatatgaattcacttccagatacttcttcaaagaagatggcttctggtacaatgcacctctcatcgagcgtgtcttctcttccattgttcaatgttcaaagtccacatcactttgtccagagatcatgggaggtcggctgctctccatcctcatcaacgcatggccactcacccgcaagaacgacactctcaacgacgtcccagtcaaagacatcatcatggcactgtacacaatcactaaaaactacatggacaaacataacattttctacacaacagcactcgttgaatttgactttgacgatgaacgcatcagcaacatcggtcgtgccgccgtagatcacat
| 8 | 17 | 0.5 | 0 | 457 |
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