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AP Biology Chapter 18 Genomes and Their Evolution
The data on this slide, this is nothing you need to memorize.
AP Biology Chapter 18 Genomes and Their Evolution
Actually, if you look at the data, this slide is almost 10 years old in terms of the data on it.
AP Biology Chapter 18 Genomes and Their Evolution
It just gives you some ideas as to the size and complexity of genomes.
AP Biology Chapter 18 Genomes and Their Evolution
I want to actually use this slide to analyze because the AP exam, none of this should you memorize of course, but they could give you data to analyze.
AP Biology Chapter 18 Genomes and Their Evolution
Let's just go through this together quickly.
AP Biology Chapter 18 Genomes and Their Evolution
I have domain bacteria, domain archaea, and domain eukarya.
AP Biology Chapter 18 Genomes and Their Evolution
We haven't done the domains yet, really.
AP Biology Chapter 18 Genomes and Their Evolution
Both of these are what back in the day you would call bacteria.
AP Biology Chapter 18 Genomes and Their Evolution
Eukarya is plants, algae, animals, and protists.
AP Biology Chapter 18 Genomes and Their Evolution
You're in eukarya.
AP Biology Chapter 18 Genomes and Their Evolution
Genome size.
AP Biology Chapter 18 Genomes and Their Evolution
The MB is megabases, which is millions of bases.
AP Biology Chapter 18 Genomes and Their Evolution
Obviously, eukaryotes have between 10 and 40,000 million bases, much larger genomes than bacteria.
AP Biology Chapter 18 Genomes and Their Evolution
Number of genes.
AP Biology Chapter 18 Genomes and Their Evolution
How many genes does it take to make a bacteria?
AP Biology Chapter 18 Genomes and Their Evolution
So 1,500 to close to 8,000.
AP Biology Chapter 18 Genomes and Their Evolution
For eukaryotic cells, obviously, it's much higher.
AP Biology Chapter 18 Genomes and Their Evolution
Gene density though is the number of genes inside the genome.
AP Biology Chapter 18 Genomes and Their Evolution
So it's like a unit of, well, it's a unit of density.
AP Biology Chapter 18 Genomes and Their Evolution
And notice that bacteria have a higher gene density than eukaryotes.
AP Biology Chapter 18 Genomes and Their Evolution
Bacteria have fewer genes, right?
AP Biology Chapter 18 Genomes and Their Evolution
But the density is higher because they have fewer bases.
AP Biology Chapter 18 Genomes and Their Evolution
Lots of the DNA in eukaryotes is, it's not, when I was in school, we called it junk DNA.
AP Biology Chapter 18 Genomes and Their Evolution
It's really not junk.
AP Biology Chapter 18 Genomes and Their Evolution
There's a reason for it.
AP Biology Chapter 18 Genomes and Their Evolution
If it's DNA, it doesn't actually code for proteins.
AP Biology Chapter 18 Genomes and Their Evolution
And we discussed introns and exons.
AP Biology Chapter 18 Genomes and Their Evolution
Bacteria don't have introns.
AP Biology Chapter 18 Genomes and Their Evolution
Some types of archaea do have introns.
AP Biology Chapter 18 Genomes and Their Evolution
Your cells, eukaryotic cells, have introns that you have to cut out.
AP Biology Chapter 18 Genomes and Their Evolution
Again, other reasons of non-coding DNA.
AP Biology Chapter 18 Genomes and Their Evolution
DNA that doesn't code for proteins or messenger RNAs.
AP Biology Chapter 18 Genomes and Their Evolution
Very, very little.
AP Biology Chapter 18 Genomes and Their Evolution
In bacteria, you have lots of non-coding DNA.
AP Biology Chapter 18 Genomes and Their Evolution
We use the term junk DNA.
AP Biology Chapter 18 Genomes and Their Evolution
The term non-coding DNA is a much better term.
AP Biology Chapter 18 Genomes and Their Evolution
So let's just look at this.
AP Biology Chapter 18 Genomes and Their Evolution
So you actually know what?
AP Biology Chapter 18 Genomes and Their Evolution
I'm not actually presenting this presentation.
AP Biology Chapter 18 Genomes and Their Evolution
Let's do it.
AP Biology Chapter 18 Genomes and Their Evolution
Let me normally do it.
AP Biology Chapter 18 Genomes and Their Evolution
Make it bigger.
AP Biology Chapter 18 Genomes and Their Evolution
There we go.
AP Biology Chapter 18 Genomes and Their Evolution
That's how it usually looks.
AP Biology Chapter 18 Genomes and Their Evolution
Okay.
AP Biology Chapter 18 Genomes and Their Evolution
So let's just look.
AP Biology Chapter 18 Genomes and Their Evolution
So how many genes does it take to make a human?
AP Biology Chapter 18 Genomes and Their Evolution
So here's human, homo sapiens.
AP Biology Chapter 18 Genomes and Their Evolution
Just under 21,000 genes to make a human.
AP Biology Chapter 18 Genomes and Their Evolution
That's all you need.
AP Biology Chapter 18 Genomes and Their Evolution
Compare that to rice, over 40,000.
AP Biology Chapter 18 Genomes and Their Evolution
Compare that to corn, 32,000.
AP Biology Chapter 18 Genomes and Their Evolution
It takes more genes to make corn than it does to make a human.
AP Biology Chapter 18 Genomes and Their Evolution
What else is surprising?
AP Biology Chapter 18 Genomes and Their Evolution
The mustard family, mustard plants, have more genes than humans do.
AP Biology Chapter 18 Genomes and Their Evolution
Bacteria, again, look at the numbers.
AP Biology Chapter 18 Genomes and Their Evolution
Just over 1,000 to 4,000 or 5,000.
AP Biology Chapter 18 Genomes and Their Evolution
To me, that's surprising.
AP Biology Chapter 18 Genomes and Their Evolution
It takes 21,000 genes more or less to make a human.
AP Biology Chapter 18 Genomes and Their Evolution
So in terms of numbers of genes, you can read this yourself.
AP Biology Chapter 18 Genomes and Their Evolution
The main thing I want you to know from this slide is this last point, which we've already discussed.
AP Biology Chapter 18 Genomes and Their Evolution
21,000 genes isn't a lot of genes to make a human, but you do alternative DNA splicing or actually RNA splicing, a messenger RNAs.
AP Biology Chapter 18 Genomes and Their Evolution
You can splice genes different ways.
AP Biology Chapter 18 Genomes and Their Evolution
The one gene in humans could actually become multiple different types of messenger RNAs based upon alternative splicing, which bacteria don't do.
AP Biology Chapter 18 Genomes and Their Evolution
You can get away with only having 21,000 genes because you can splice them different ways.
AP Biology Chapter 18 Genomes and Their Evolution
This slide starts us into a slightly different topic.
AP Biology Chapter 18 Genomes and Their Evolution
So chapter 19, we're going to start evolution.
AP Biology Chapter 18 Genomes and Their Evolution
The ultimate source of new genes is mutation.
AP Biology Chapter 18 Genomes and Their Evolution
I understand theoretically how you go from normal hemoglobin to sickle cell.
AP Biology Chapter 18 Genomes and Their Evolution
It's a point mutation of a single base changing one amino acid like that.
AP Biology Chapter 18 Genomes and Their Evolution
I get how mutations can create new genes, but what I don't fully get or what's much harder to understand conceptually is how do you evolve hemoglobin in the first place?
AP Biology Chapter 18 Genomes and Their Evolution
Where did those 21,000 genes come from?
AP Biology Chapter 18 Genomes and Their Evolution
I get the gene they can mutate, but how is it that I can create such complex organisms based upon a process that's largely random in mutations?
AP Biology Chapter 18 Genomes and Their Evolution
Biology can't fully answer that question, to be honest.
AP Biology Chapter 18 Genomes and Their Evolution
I don't have an answer for you, but there are some things that happen in cells that help you to understand how you can evolve different types of hemoglobin.
AP Biology Chapter 18 Genomes and Their Evolution
Pseudo genes are copies of genes in your DNA that don't work anymore.
AP Biology Chapter 18 Genomes and Their Evolution
You have a gene for hemoglobin.
AP Biology Chapter 18 Genomes and Their Evolution
Elsewhere in your genome, there are copies of the gene for hemoglobin that are mutated and don't work anymore.
AP Biology Chapter 18 Genomes and Their Evolution
Like, what?
AP Biology Chapter 18 Genomes and Their Evolution
Where did those come from?
AP Biology Chapter 18 Genomes and Their Evolution
What the heck is that?
AP Biology Chapter 18 Genomes and Their Evolution
Every DNA is just DNA that repeats, it has multiple copies of the same DNA.
AP Biology Chapter 18 Genomes and Their Evolution
The way that you get things like pseudogenes is very interesting.
AP Biology Chapter 18 Genomes and Their Evolution
It doesn't seem to directly relate to evolution, but it actually does if you think about it.
AP Biology Chapter 18 Genomes and Their Evolution
For example, I actually will give you some examples in a minute, but you have genes in your body that make very different proteins, but the sequence of those genes is very, very, very similar.
AP Biology Chapter 18 Genomes and Their Evolution
Maybe they originated from one gene that got duplicated, and those two versions evolved different ways to today to give you way different proteins, but because their sequences are so similar, it's like, well, that can't just be a coincidence.
AP Biology Chapter 18 Genomes and Their Evolution
This chart just shows only 1.5% of your DNA is exons, is actually coding.
AP Biology Chapter 18 Genomes and Their Evolution
The rest are regulatory sequences like promoters, introns that get cut out, unique non-coding, repetitive DNA, transposons, things that we're going to see in a minute.
AP Biology Chapter 18 Genomes and Their Evolution
You don't need to have these numbers memorized.
AP Biology Chapter 18 Genomes and Their Evolution
This just shows you that most of your DNA doesn't actually code for proteins.
AP Biology Chapter 18 Genomes and Their Evolution
This leads us to a story.
AP Biology Chapter 18 Genomes and Their Evolution
Again, this story might not be obvious how it relates to evolution, but it totally does.
AP Biology Chapter 18 Genomes and Their Evolution
Barbara McClintock was a scientist, a geneticist.
AP Biology Chapter 18 Genomes and Their Evolution
She's American.
AP Biology Chapter 18 Genomes and Their Evolution
She's working somewhere in New England.
AP Biology Chapter 18 Genomes and Their Evolution
I forget what state.
AP Biology Chapter 18 Genomes and Their Evolution
This is the middle of the 20th century.
AP Biology Chapter 18 Genomes and Their Evolution
She proposes these things called transposons or transposable elements.
AP Biology Chapter 18 Genomes and Their Evolution
This is going to sound crazy at first.
AP Biology Chapter 18 Genomes and Their Evolution
When she first proposed this, people did not accept it at all.